Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25c07
(227 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1379 + 33113374-33113529,33114046-33114143,33114811-331148... 29 0.53
04_01_0308 + 4188726-4190351 29 0.53
04_01_0283 + 3768732-3768792,3769235-3769876,3769907-3770076,377... 29 0.53
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 29 0.70
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42... 29 0.70
08_02_1250 - 25586442-25587023,25587141-25587827,25588389-25589492 27 1.6
02_02_0652 - 12651163-12653210,12653327-12653627 27 2.8
05_07_0354 - 29507068-29507170,29507406-29507431,29508264-295083... 26 3.7
04_01_0041 - 464695-464850,467485-469029 26 3.7
02_03_0113 - 15381289-15381556,15381633-15381985,15382184-153822... 26 3.7
09_02_0243 - 6192324-6192443,6193246-6193374,6193528-6193695,619... 26 4.9
03_01_0027 - 250837-250877,250972-252909,253733-253805,254476-25... 26 4.9
11_06_0051 - 19645726-19646007,19646045-19646513,19647749-196477... 25 6.5
11_03_0224 + 11886184-11886190,11886582-11886871,11887424-11887516 25 6.5
08_01_0418 - 3716226-3716279,3716531-3716581,3716656-3716751,371... 25 6.5
03_05_0882 + 28467691-28467730,28468386-28468675,28469262-284694... 25 6.5
03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565... 25 6.5
02_03_0193 + 16211395-16212729,16212894-16213401,16213712-16214112 25 6.5
02_01_0611 - 4567839-4568144,4568280-4569209,4569301-4569566,456... 25 6.5
01_06_0932 - 33147656-33148098,33148631-33148675,33148815-331489... 25 6.5
10_08_0789 + 20569738-20570207,20573425-20573464,20573484-205735... 25 8.6
10_08_0269 - 16366392-16366403,16366469-16368262 25 8.6
10_01_0249 - 2601376-2601547,2611800-2612464,2612549-2613055 25 8.6
07_03_1615 - 28157237-28157472,28157649-28157728,28157853-281580... 25 8.6
07_03_0281 - 16221526-16221624,16221935-16221986,16222071-162221... 25 8.6
06_03_1377 - 29692895-29692899,29700435-29702190 25 8.6
06_01_0090 - 724296-724532,724756-724938,725038-725088,725520-72... 25 8.6
02_04_0160 - 20427774-20428217,20428301-20428402,20428503-204285... 25 8.6
02_02_0632 - 12413660-12413677,12413839-12413870,12414377-124144... 25 8.6
>04_04_1379 +
33113374-33113529,33114046-33114143,33114811-33114880,
33116668-33116800,33116981-33118940,33119016-33119076,
33119554-33120057
Length = 993
Score = 29.1 bits (62), Expect = 0.53
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -2
Query: 166 QSQRDLKSKLEEINRHKQKITIDSQHFEKIKSLTKNVNELQNMEKRVMK 20
Q Q D++S+ + N K QH E +K +TK E Q + V K
Sbjct: 288 QKQLDIRSEERKFNL-KSADAAHKQHLENVKKITKLEAECQRLRSMVRK 335
>04_01_0308 + 4188726-4190351
Length = 541
Score = 29.1 bits (62), Expect = 0.53
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -2
Query: 187 SKNYNASQSQRDLKSKLEEINRHKQKITIDSQHFEKIKSLTKNVNELQNMEKRVMK 20
++N ++ DLK KLEEI +K + ++ + T+ N L E + +K
Sbjct: 170 AQNEEITKKLEDLKRKLEEIQTNKDLVEGETNELQPEVFATEEKNSLSEAEIKCLK 225
>04_01_0283 +
3768732-3768792,3769235-3769876,3769907-3770076,
3770134-3770511,3770602-3770991
Length = 546
Score = 29.1 bits (62), Expect = 0.53
Identities = 15/59 (25%), Positives = 33/59 (55%)
Frame = -2
Query: 187 SKNYNASQSQRDLKSKLEEINRHKQKITIDSQHFEKIKSLTKNVNELQNMEKRVMKSRQ 11
++N ++ DLK+KLEEI +K ++S++ EK + L+ + V+++++
Sbjct: 204 TQNEEITKDLEDLKTKLEEIKTNKD--LVESENEEKYSQSEAEIKYLKQVMGAVVEAKE 260
>05_05_0348 + 24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 28.7 bits (61), Expect = 0.70
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = -2
Query: 163 SQRDLKSKLEEINRHKQKITIDSQHFEKIKSLTKNVNELQNMEKRVMKSRQNFL 2
+++ L +INRHK +IT + +K LTK + E + +++++ ++ +
Sbjct: 917 NRQQLDKTSSDINRHKVRITTCE---KLVKKLTKGIEESRKEKEKLLAEKEKMM 967
>03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-420209,
420334-420502,421115-424273,424367-424485,424915-425116
Length = 1363
Score = 28.7 bits (61), Expect = 0.70
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = -2
Query: 220 FTSSVYFF--KMFSKNYNASQSQRDLKSKLEEI-NRH-KQKITIDSQHFEKIKSLTKNVN 53
F +V F K+ S + S ++ L S+LE I H +Q+ I+ HF K +
Sbjct: 913 FCKTVEFLEAKLSSLQKDISSKEQSLLSELESIFQEHTEQEEKINRAHFMLNKIEKEKTL 972
Query: 52 ELQNMEKRVM 23
E++N+E+ VM
Sbjct: 973 EVENLEREVM 982
>08_02_1250 - 25586442-25587023,25587141-25587827,25588389-25589492
Length = 790
Score = 27.5 bits (58), Expect = 1.6
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -2
Query: 166 QSQRDLKSKLEEINRHKQKITIDSQHF-EKIKSLTKNVNELQNMEKRVMKSRQNF 5
Q D + L+EI+ K I D F +K+ + K EL+ EKRV + +NF
Sbjct: 587 QQTSDARISLQEISSRKAVIQQDIATFKQKLSFIDKRGPELE-AEKRVAAAARNF 640
>02_02_0652 - 12651163-12653210,12653327-12653627
Length = 782
Score = 26.6 bits (56), Expect = 2.8
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = -2
Query: 160 QRDLKSKLEEINRHKQKITIDSQHFEKIKSLTK-NVNELQNMEKRVMKSRQ 11
Q ++K+K+E++N H QK+ I Q + S+ K + LQ + +R++ Q
Sbjct: 384 QAEVKAKVEKLNLHGQKLKI--QIIVTVYSVPKATIEGLQLLGERMLLEEQ 432
>05_07_0354 -
29507068-29507170,29507406-29507431,29508264-29508301,
29508722-29508825,29509005-29509024,29509251-29509299,
29510319-29510406,29510463-29510562,29510660-29510737,
29512688-29512804,29513718-29513821,29514497-29514569,
29514904-29514981,29515091-29515215,29515278-29515341,
29515439-29515597,29515950-29516048,29516496-29516624,
29517010-29517075,29517160-29517304,29517379-29517500,
29517683-29517838,29517918-29518029,29518891-29519036,
29519148-29519252,29519391-29519540,29519703-29519776,
29519902-29520055,29520142-29520408
Length = 1016
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/40 (25%), Positives = 24/40 (60%)
Frame = -2
Query: 175 NASQSQRDLKSKLEEINRHKQKITIDSQHFEKIKSLTKNV 56
NA ++ ++ ++ + HKQ+++ QH E I +T+++
Sbjct: 731 NAIEAAKEYENCKRKTQEHKQQLSNAKQHAESIAMITEDL 770
>04_01_0041 - 464695-464850,467485-469029
Length = 566
Score = 26.2 bits (55), Expect = 3.7
Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = -2
Query: 160 QRDLKSKLEEINRHKQKITIDSQHFEKIKSLTK-NVNELQNMEKRVMKSRQ 11
Q ++K+K+E++N H QK+ I Q + S+ K + LQ + +R+++ +
Sbjct: 132 QAEVKAKVEKLNLHGQKLEI--QIIVTVYSVPKATIEGLQLLGERMLQEEK 180
>02_03_0113 -
15381289-15381556,15381633-15381985,15382184-15382231,
15382260-15382439,15382835-15382954
Length = 322
Score = 26.2 bits (55), Expect = 3.7
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 45 CSSFTFFVRLLIFSKCWLSIVIFC 116
C FT + +FS W+ + I+C
Sbjct: 298 CEQFTKCIERSVFSHIWIKLFIYC 321
>09_02_0243 -
6192324-6192443,6193246-6193374,6193528-6193695,
6193833-6194023,6194137-6194281,6195307-6195462
Length = 302
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 151 LKSKLEEINRHKQKITIDSQHFEKIKSLTKNVNE 50
LKSK EEIN K K+ E + + TK +E
Sbjct: 123 LKSKDEEINDMKDKVLRSYAEMENVIARTKRESE 156
>03_01_0027 -
250837-250877,250972-252909,253733-253805,254476-254555,
255336-255595,255721-255785,256747-256839
Length = 849
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 175 NASQSQRDLKSKLEEINRHKQKITIDSQHF-EKIKSLTKNVNELQN 41
N + +LK ++E + + + Q ++I SLT + NELQN
Sbjct: 604 NLENAVSELKKEVESLTEQNRSSELLIQELRDEINSLTDSRNELQN 649
>11_06_0051 -
19645726-19646007,19646045-19646513,19647749-19647771,
19647978-19648328
Length = 374
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/53 (20%), Positives = 26/53 (49%)
Frame = -2
Query: 160 QRDLKSKLEEINRHKQKITIDSQHFEKIKSLTKNVNELQNMEKRVMKSRQNFL 2
++ L L++I + + + EKI + + NE++ E+ M R++ +
Sbjct: 183 EKSLDDALDQIMEKLELMEAKRRQNEKINRILEKFNEMEKRERESMHRRRDIM 235
>11_03_0224 + 11886184-11886190,11886582-11886871,11887424-11887516
Length = 129
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 148 KSKLEEINRHKQKITIDSQHFEKIKSLTKN 59
K+K E +NR K+K+TI + F +L K+
Sbjct: 25 KAKYELVNREKRKLTITNVPFSLTCALHKD 54
>08_01_0418 -
3716226-3716279,3716531-3716581,3716656-3716751,
3717037-3717194,3717303-3717417,3717511-3717564,
3717843-3717950,3718494-3718583,3718818-3718856,
3718993-3719172,3719264-3719576,3719659-3719834
Length = 477
Score = 25.4 bits (53), Expect = 6.5
Identities = 17/54 (31%), Positives = 33/54 (61%)
Frame = -2
Query: 172 ASQSQRDLKSKLEEINRHKQKITIDSQHFEKIKSLTKNVNELQNMEKRVMKSRQ 11
A+QS ++ + LE ++ +K+ S+H KI++L + V + +EK V K+R+
Sbjct: 286 ATQSVQEKTATLEIYSKGYEKL---SKHSTKIQALQEQVTATKALEKEV-KARK 335
>03_05_0882 +
28467691-28467730,28468386-28468675,28469262-28469411,
28470126-28470214,28470331-28470440,28470545-28470639,
28471110-28471162,28471374-28471539,28471909-28472001,
28472304-28472432,28472549-28472668,28472862-28472942,
28473495-28473602,28473895-28474038,28474120-28474218,
28474300-28474379,28474830-28474922,28475197-28475320
Length = 687
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 126 LISSNLDFKSR*D*DAL*FFENILKKYTDEV 218
L S DFK D L F ++LK Y +EV
Sbjct: 45 LAESTRDFKKASSDDKLSLFNSLLKSYQEEV 75
>03_05_0754 +
27452203-27452242,27452360-27455611,27456480-27456533,
27456774-27456872,27456948-27457012,27457476-27457575,
27458326-27458408,27458494-27458569,27458920-27459698
Length = 1515
Score = 25.4 bits (53), Expect = 6.5
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -2
Query: 163 SQRDLKSKLEEINRHKQKITIDSQHFEKIKSLTKNVNELQNMEKRVMK 20
S+R+ + EIN HKQK + +H E++K +N + E V+K
Sbjct: 576 SERESELSQIEINLHKQKQAM--EHLEELKLSMENELKGYMDENNVLK 621
>02_03_0193 + 16211395-16212729,16212894-16213401,16213712-16214112
Length = 747
Score = 25.4 bits (53), Expect = 6.5
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = -2
Query: 163 SQRDLKSKLEEINRHKQKITI 101
+Q ++K+K+E++N H QK+ I
Sbjct: 422 AQAEVKAKVEKLNLHGQKLEI 442
>02_01_0611 -
4567839-4568144,4568280-4569209,4569301-4569566,
4569662-4569970,4570497-4570647,4570958-4571012,
4571137-4571512,4571560-4571797,4571878-4572096,
4572629-4572910
Length = 1043
Score = 25.4 bits (53), Expect = 6.5
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -2
Query: 196 KMFSKNYNASQSQRDLKSKLE-EINRHKQKITIDSQHFEKIKSLTKNVNELQNMEKRV 26
K+ KN S++ L SKLE ++ KQK S+H+E KSL + ++ RV
Sbjct: 580 KLSLKNDTDKASKQRL-SKLEADLESLKQKQKNLSEHWEYEKSLMTRIRSIKEETDRV 636
>01_06_0932 -
33147656-33148098,33148631-33148675,33148815-33148945,
33149192-33149817
Length = 414
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +3
Query: 33 FSIFCSSFTFFVRLLIFSKCWLSIVIFCLCLLIS 134
F SS FF+ L +FS W + + C ++
Sbjct: 355 FIAIVSSTGFFLYLSLFSSVWFKVYVLLSCAYLT 388
>10_08_0789 +
20569738-20570207,20573425-20573464,20573484-20573536,
20573633-20574212,20574323-20575384,20575631-20575813,
20576112-20576199,20576285-20576532,20576712-20577053,
20579026-20579163,20579521-20579547
Length = 1076
Score = 25.0 bits (52), Expect = 8.6
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 139 LEEINRHKQKITIDSQHFEKIKSLTKNVNELQNMEK 32
L +H K Q ++IKSL K V++L+N+ K
Sbjct: 577 LATFRKHFPKNMFSEQVSKRIKSLIKCVSKLENLLK 612
>10_08_0269 - 16366392-16366403,16366469-16368262
Length = 601
Score = 25.0 bits (52), Expect = 8.6
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 175 NASQSQRDLKSKLEEINRHKQKITIDSQHFEKIKSLTKNVNELQNMEKRVMKSRQNFL 2
N + + K ++EE + K+ I + ++ +K KS VNE E ++ R N L
Sbjct: 191 NTNDMYKLKKKEMEEASPSKKCIALQAEVEDKSKSKVNEVNEDLEEEMILLARRFNDL 248
>10_01_0249 - 2601376-2601547,2611800-2612464,2612549-2613055
Length = 447
Score = 25.0 bits (52), Expect = 8.6
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -2
Query: 136 EEINRHKQKITIDSQHFEKIKSLTKNVNELQNMEKRVMKSRQNFL 2
E+ RH KIT + + E ++ KN ME + S N+L
Sbjct: 38 EKKRRHTSKITGEERVRELLEGHVKNCRVAFRMEPEIFISLANYL 82
>07_03_1615 -
28157237-28157472,28157649-28157728,28157853-28158009,
28158379-28158565,28158646-28158772,28159218-28159805,
28159898-28160443,28161579-28161620,28162081-28162145,
28162273-28162377,28162682-28162741,28163149-28163237,
28163611-28163732,28163862-28163968,28164041-28164111,
28164377-28164470,28165010-28165247,28166112-28166347
Length = 1049
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = -2
Query: 169 SQSQRDLKSKLEEINRHKQKITIDSQHFEKIKSLTKNVNELQNM 38
++S R + KLE I +KI +S H +SL+ +++ +++
Sbjct: 608 TRSARSAREKLEAIEERSEKIMRESDHLR--RSLSSIMSQTEHL 649
>07_03_0281 -
16221526-16221624,16221935-16221986,16222071-16222165,
16222347-16222398,16222483-16222611,16222748-16222812
Length = 163
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 175 NASQSQRDLKSKLEEINRHKQKITIDSQHFEKIKSLTKNVN 53
N S+ L +K E+ + T+ + +EK S T+N+N
Sbjct: 6 NTFSSENTLITKAEDKRNSNNEDTVYDKEYEKDGSPTENIN 46
>06_03_1377 - 29692895-29692899,29700435-29702190
Length = 586
Score = 25.0 bits (52), Expect = 8.6
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 175 NASQSQRDLKSKLEEINRHKQKITIDSQHFEKIKSLTKNVNELQNMEKRVMKSRQNFL 2
N + + K ++EE + K+ I + ++ +K KS VNE E ++ R N L
Sbjct: 191 NTNDMYKLKKKEMEEASPSKKCIALQAEVEDKSKSKVNEVNEDLEEEMVLLARRFNDL 248
>06_01_0090 -
724296-724532,724756-724938,725038-725088,725520-725639,
725738-725840,726106-726264,726728-726846,726891-727004,
727119-727277,727404-727451,728464-728640,729064-729116,
729549-729661,729793-729873,729966-730081,730786-730905,
732321-732429,732593-732770,732852-732920,733102-733233,
733657-733766,733843-734003,734081-734171,734258-734355,
734499-734619,734732-734892,734985-735090,735142-735236,
735828-735852,736008-736084,736196-736282,736372-736421,
736558-736639,736735-736795,737064-737116,737206-737395,
737472-737595,737860-737962,738064-738156,740344-740422,
740508-740584,740915-741043,742614-742731,742816-742913,
743457-743546,744998-745123,745238-745351,745488-745611,
745865-746019,746104-746201,746357-746600
Length = 1926
Score = 25.0 bits (52), Expect = 8.6
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +3
Query: 12 CLDFITLFSIFCSSFTFFVRLLIFSKCWLSIVIFCLCLLISSNLDFKSR*D*DAL*F 182
CLD + +F + ++ F + L+ WL+ V + L LD K+ D++ F
Sbjct: 551 CLDVLLMFGAYKTARGFALSRLVIRFIWLTAVSTFVTYLYLKVLDEKNARSSDSIYF 607
>02_04_0160 -
20427774-20428217,20428301-20428402,20428503-20428595,
20428675-20428860,20428966-20429213,20429292-20429412,
20430674-20430718,20431086-20431138,20431152-20431173
Length = 437
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -2
Query: 166 QSQRDLKSKLEEINRHKQKITIDSQHFEKI 77
Q + +L+S+ EE+N K+ + S H E++
Sbjct: 378 QLKGELQSQREELNSQKRTVEEQSGHMERL 407
>02_02_0632 -
12413660-12413677,12413839-12413870,12414377-12414494,
12414794-12414860,12416098-12416237,12416378-12416470,
12416581-12416643,12418070-12418120,12419508-12419606,
12419876-12420012,12420121-12420219,12420346-12420523
Length = 364
Score = 25.0 bits (52), Expect = 8.6
Identities = 8/31 (25%), Positives = 14/31 (45%)
Frame = +2
Query: 20 LHNSFFHILQLVYVFCETFNFFKMLAVNSYF 112
LH FH++QL + + F + +F
Sbjct: 293 LHTRIFHVIQLAIIHLQCTQFLSLRCATKHF 323
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,117,452
Number of Sequences: 37544
Number of extensions: 49768
Number of successful extensions: 242
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of database: 14,793,348
effective HSP length: 54
effective length of database: 12,765,972
effective search space used: 268085412
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -