Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25c05
(553 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039044-1|AAG24127.1| 272|Caenorhabditis elegans Hypothetical ... 28 3.9
Z81043-5|CAB02802.2| 278|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 27 6.8
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 27 6.8
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 27 6.8
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 27 6.8
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical pr... 27 6.8
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 27 6.8
AC006680-5|AAK72301.2| 300|Caenorhabditis elegans Serpentine re... 27 9.0
>AF039044-1|AAG24127.1| 272|Caenorhabditis elegans Hypothetical
protein F48G7.13 protein.
Length = 272
Score = 28.3 bits (60), Expect = 3.9
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Frame = -1
Query: 382 CTQNIELVMISSFDS---VNFY*NTLCNFFIYFLFQLQTF-----CSFFV*HDCHFLYVS 227
CT ++ + +S +S +NF + NFF++FLFQ F +F V C +Y S
Sbjct: 191 CTYKMQKLCFNSRNSSKFLNFSKTKIINFFLHFLFQFVKFELIPNSNFGV--SCQEMYQS 248
Query: 226 FSTQQFQI 203
T F++
Sbjct: 249 TRTSIFEL 256
>Z81043-5|CAB02802.2| 278|Caenorhabditis elegans Hypothetical
protein C29F3.6 protein.
Length = 278
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -2
Query: 330 FIKIRCAIFLSIFCFNCKHSVVFLFSMTATSFML 229
FI + C IF FN K++ +F+F++ SF++
Sbjct: 106 FISVWCPIFYKTM-FNLKYTKLFIFAVWLISFLI 138
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 170 RAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECLQLKQKIDK 304
R ++ LDNL R ++E +NK TE QLK+++DK
Sbjct: 1034 RDSALYEVRLDNLDRAREVDVLRET---VNKLKTENKQLKKEVDK 1075
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 170 RAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECLQLKQKIDK 304
R ++ LDNL R ++E +NK TE QLK+++DK
Sbjct: 1068 RDSALYEVRLDNLDRAREVDVLRET---VNKLKTENKQLKKEVDK 1109
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 170 RAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECLQLKQKIDK 304
R ++ LDNL R ++E +NK TE QLK+++DK
Sbjct: 1005 RDSALYEVRLDNLDRAREVDVLRET---VNKLKTENKQLKKEVDK 1046
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 170 RAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECLQLKQKIDK 304
R ++ LDNL R ++E +NK TE QLK+++DK
Sbjct: 1139 RDSALYEVRLDNLDRAREVDVLRET---VNKLKTENKQLKKEVDK 1180
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical protein
F45E10.1b protein.
Length = 1549
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 170 RAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECLQLKQKIDK 304
R ++ LDNL R ++E +NK TE QLK+++DK
Sbjct: 1034 RDSALYEVRLDNLDRAREVDVLRET---VNKLKTENKQLKKEVDK 1075
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical protein
F45E10.1a protein.
Length = 1583
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 170 RAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECLQLKQKIDK 304
R ++ LDNL R ++E +NK TE QLK+++DK
Sbjct: 1068 RDSALYEVRLDNLDRAREVDVLRET---VNKLKTENKQLKKEVDK 1109
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical protein
F45E10.1d protein.
Length = 1520
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 170 RAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECLQLKQKIDK 304
R ++ LDNL R ++E +NK TE QLK+++DK
Sbjct: 1005 RDSALYEVRLDNLDRAREVDVLRET---VNKLKTENKQLKKEVDK 1046
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical protein
F45E10.1c protein.
Length = 1654
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 170 RAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECLQLKQKIDK 304
R ++ LDNL R ++E +NK TE QLK+++DK
Sbjct: 1139 RDSALYEVRLDNLDRAREVDVLRET---VNKLKTENKQLKKEVDK 1180
>Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical
protein F45E10.1e protein.
Length = 1234
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 170 RAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECLQLKQKIDK 304
R ++ LDNL R ++E +NK TE QLK+++DK
Sbjct: 719 RDSALYEVRLDNLDRAREVDVLRET---VNKLKTENKQLKKEVDK 760
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 170 RAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECLQLKQKIDK 304
R ++ LDNL R ++E +NK TE QLK+++DK
Sbjct: 1068 RDSALYEVRLDNLDRAREVDVLRET---VNKLKTENKQLKKEVDK 1109
>AC006680-5|AAK72301.2| 300|Caenorhabditis elegans Serpentine
receptor, class x protein60 protein.
Length = 300
Score = 27.1 bits (57), Expect = 9.0
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +3
Query: 141 HFFKNWVIYLGPRLVWISL 197
+F W+I+LG +W+S+
Sbjct: 236 YFHNQWIIFLGTSFMWVSI 254
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,283,027
Number of Sequences: 27780
Number of extensions: 244689
Number of successful extensions: 666
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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