Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25c03
         (409 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9X379 Cluster: PXO1-120; n=25; Firmicutes|Rep: PXO1-12...    35   0.73 
UniRef50_Q7QHQ2 Cluster: ENSANGP00000015015; n=1; Anopheles gamb...    34   1.3  
UniRef50_A6EJQ6 Cluster: Putative uncharacterized protein; n=1; ...    33   1.7  
UniRef50_Q59U28 Cluster: Potential TOR2 kinase complex component...    33   1.7  
UniRef50_A7T0I3 Cluster: Predicted protein; n=1; Nematostella ve...    33   2.2  
UniRef50_A4RY63 Cluster: DMT family transporter: UDP-galactose/U...    32   3.9  
UniRef50_A5ZAW5 Cluster: Putative uncharacterized protein; n=1; ...    32   5.1  
UniRef50_A5I9Z0 Cluster: Putative uncharacterized protein; n=1; ...    32   5.1  
UniRef50_Q8IS66 Cluster: RNA-directed DNA polymerase; n=1; Eupry...    32   5.1  
UniRef50_Q0SUE6 Cluster: Putative uncharacterized protein; n=2; ...    31   6.8  
UniRef50_O80988 Cluster: Glycine dehydrogenase [decarboxylating]...    31   6.8  
UniRef50_A0EYR5 Cluster: Ie-0; n=1; Ecotropis obliqua NPV|Rep: I...    31   8.9  
UniRef50_Q8MQC1 Cluster: Putative uncharacterized protein; n=3; ...    31   8.9  
UniRef50_Q7QWA0 Cluster: GLP_177_40819_34538; n=1; Giardia lambl...    31   8.9  

>UniRef50_Q9X379 Cluster: PXO1-120; n=25; Firmicutes|Rep: PXO1-120 -
           Bacillus anthracis
          Length = 190

 Score = 34.7 bits (76), Expect = 0.73
 Identities = 21/96 (21%), Positives = 44/96 (45%)
 Frame = +2

Query: 65  SPK*LKVSLQLNLALRKFYGFFGDDLLPVHKSVFYHLLVHFLPYKQQDADIISDKESGAG 244
           S + L+  ++ N+A R F GF   D +P H ++ ++   HF+ +     +I  +    A 
Sbjct: 75  SERQLEKEIKTNIAYRWFLGFSLSDTIPDHSTISWNRRTHFI-HTNIFEEIFDEIVRQAT 133

Query: 245 HLKKTGDMALLSSISPVRLIKEKSMFFYELSTRSLK 352
             +  G  AL++  + ++    K+ F ++      K
Sbjct: 134 EHRMVGGRALMTDSTHIKANANKNKFVHKYKKEKAK 169


>UniRef50_Q7QHQ2 Cluster: ENSANGP00000015015; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000015015 - Anopheles gambiae
           str. PEST
          Length = 369

 Score = 33.9 bits (74), Expect = 1.3
 Identities = 21/68 (30%), Positives = 32/68 (47%)
 Frame = +2

Query: 206 DADIISDKESGAGHLKKTGDMALLSSISPVRLIKEKSMFFYELSTRSLKTRSDCHTPQQ* 385
           D D++    +GA H    GD +LLSSISP   +K+  M    ++  +L     C      
Sbjct: 284 DDDVVKTSSTGAEHRADGGDGSLLSSISP-ETMKQSLMAIIGVTVLALIIGLICRRTGIK 342

Query: 386 TRLCSKKK 409
            +LC  K+
Sbjct: 343 NKLCGTKR 350


>UniRef50_A6EJQ6 Cluster: Putative uncharacterized protein; n=1;
           Pedobacter sp. BAL39|Rep: Putative uncharacterized
           protein - Pedobacter sp. BAL39
          Length = 423

 Score = 33.5 bits (73), Expect = 1.7
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 24  RLSLVQYFQRLLASRLNDLKYLYSLISRFENFTAFL 131
           RLS + Y + L   R+ND KY +  + +F N+T  L
Sbjct: 90  RLSTLDYLEGLSDDRINDYKYSFGTLQQFTNYTLTL 125


>UniRef50_Q59U28 Cluster: Potential TOR2 kinase complex component;
           n=2; Candida albicans|Rep: Potential TOR2 kinase complex
           component - Candida albicans (Yeast)
          Length = 1287

 Score = 33.5 bits (73), Expect = 1.7
 Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
 Frame = +3

Query: 39  QYFQRLLASRLNDLKYLYSLISRFENFTAFLVMTC-CQCIKVFFTISLYTFYLTNSKML- 212
           ++F+RLL S     KY +S +S  ++  +F  +   CQ I++F ++     YL+ SK+L 
Sbjct: 641 KFFKRLL-SFYRPFKYRFSTVSLTKDKNSFKYINIGCQLIELFLSLDNGIKYLSKSKLLP 699

Query: 213 -TSSVTKKVEP 242
             S +  +++P
Sbjct: 700 QISEIVAQIDP 710


>UniRef50_A7T0I3 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 568

 Score = 33.1 bits (72), Expect = 2.2
 Identities = 18/55 (32%), Positives = 32/55 (58%)
 Frame = +3

Query: 3   CYIIITIRLSLVQYFQRLLASRLNDLKYLYSLISRFENFTAFLVMTCCQCIKVFF 167
           C++I+ +   LV YF ++L SR   L +L  L+SR E    FL++   + + ++F
Sbjct: 283 CFLIVLVSRELVLYFLKVLVSRELVLCFLIVLVSR-ELVLCFLIVLVSRELVLYF 336



 Score = 33.1 bits (72), Expect = 2.2
 Identities = 20/59 (33%), Positives = 33/59 (55%)
 Frame = +3

Query: 3   CYIIITIRLSLVQYFQRLLASRLNDLKYLYSLISRFENFTAFLVMTCCQCIKVFFTISL 179
           C++I+ +   LV YF ++L SR   L +L  L+SR E    FL++   + + + F I L
Sbjct: 322 CFLIVLVSRELVLYFLKVLVSRELVLCFLIVLVSR-ELVLCFLIVLVSRELVLCFLIVL 379


>UniRef50_A4RY63 Cluster: DMT family transporter:
           UDP-galactose/UDP-glucose; n=1; Ostreococcus lucimarinus
           CCE9901|Rep: DMT family transporter:
           UDP-galactose/UDP-glucose - Ostreococcus lucimarinus
           CCE9901
          Length = 400

 Score = 32.3 bits (70), Expect = 3.9
 Identities = 20/78 (25%), Positives = 32/78 (41%)
 Frame = +3

Query: 6   YIIITIRLSLVQYFQRLLASRLNDLKYLYSLISRFENFTAFLVMTCCQCIKVFFTISLYT 185
           Y  ++  LSL++YF    A  +  L+ + S++  F  F   L              ++YT
Sbjct: 323 YSSVSFILSLIKYFGATEAEIVKSLRKVLSIVISFALFPKELNWKYIAGFAAVVVSTVYT 382

Query: 186 FYLTNSKMLTSSVTKKVE 239
           FYL   K    +  K  E
Sbjct: 383 FYLKQQKNAAKAAAKAAE 400


>UniRef50_A5ZAW5 Cluster: Putative uncharacterized protein; n=1;
           Eubacterium ventriosum ATCC 27560|Rep: Putative
           uncharacterized protein - Eubacterium ventriosum ATCC
           27560
          Length = 478

 Score = 31.9 bits (69), Expect = 5.1
 Identities = 13/35 (37%), Positives = 25/35 (71%)
 Frame = +2

Query: 254 KTGDMALLSSISPVRLIKEKSMFFYELSTRSLKTR 358
           +T DMALLS IS  ++++ K    +E +++S+K++
Sbjct: 250 RTADMALLSGISEAKILEVKQTEIHEKASQSIKSK 284


>UniRef50_A5I9Z0 Cluster: Putative uncharacterized protein; n=1;
           Legionella pneumophila str. Corby|Rep: Putative
           uncharacterized protein - Legionella pneumophila (strain
           Corby)
          Length = 214

 Score = 31.9 bits (69), Expect = 5.1
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +3

Query: 57  LASRLNDLKYLYSLISRFENFTAFLVMTCCQCIKVFFTISLYTFYLTNSK 206
           + S  +  K+  +L++ FE F AF++    Q   V FTI ++ FY   SK
Sbjct: 28  IRSNCSKCKFKRALVNFFEKFWAFIINKPIQKYPVGFTIVVFLFYYFISK 77


>UniRef50_Q8IS66 Cluster: RNA-directed DNA polymerase; n=1; Euprymna
           scolopes|Rep: RNA-directed DNA polymerase - Euprymna
           scolopes
          Length = 202

 Score = 31.9 bits (69), Expect = 5.1
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +2

Query: 140 LLPVHKSVFYHLLVHFLPYKQQDADIISDKESGAGHLKKTGDMALLSS 283
           LLP+   +F  L+ H L +   DA +++DK+ G    + T D+  + S
Sbjct: 94  LLPLFAKIFETLINHALVHHLTDAKLLTDKQYGFRQARSTADILTVIS 141


>UniRef50_Q0SUE6 Cluster: Putative uncharacterized protein; n=2;
           Clostridium perfringens|Rep: Putative uncharacterized
           protein - Clostridium perfringens (strain SM101 / Type
           A)
          Length = 99

 Score = 31.5 bits (68), Expect = 6.8
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +3

Query: 45  FQRLLASRLNDLKYLYSLISRFENFTAFLVMTCCQCIKV--FFTISL 179
           F  +L + LN+ KY   L S F NF   ++  C  C K   FF I L
Sbjct: 36  FNGILYTNLNEEKYKKILFSTFLNFIILILCLCIVCFKFNPFFPIFL 82


>UniRef50_O80988 Cluster: Glycine dehydrogenase [decarboxylating],
           mitochondrial precursor; n=261; cellular organisms|Rep:
           Glycine dehydrogenase [decarboxylating], mitochondrial
           precursor - Arabidopsis thaliana (Mouse-ear cress)
          Length = 1044

 Score = 31.5 bits (68), Expect = 6.8
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +3

Query: 192 LTNSKMLTSSVTKKVEPDT*KKPVTWHSFLQYHPF 296
           L +S +   S T K+   T   PVTW SF   HPF
Sbjct: 574 LCHSMIPLGSCTMKLNATTEMMPVTWPSFTNMHPF 608


>UniRef50_A0EYR5 Cluster: Ie-0; n=1; Ecotropis obliqua NPV|Rep: Ie-0
           - Ecotropis obliqua NPV
          Length = 252

 Score = 31.1 bits (67), Expect = 8.9
 Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
 Frame = +2

Query: 83  VSLQLNLALRKFYGFFGDDLLPVHKSVFYHLLVHFLPYKQQDADIISDKESGAGHL--KK 256
           V LQ  L  + F     D L   H  +F+  +V  L YK+ D DI+   +  A HL  K 
Sbjct: 48  VKLQFQLKSKAF-----DALQRQHYKMFHEEIVEILRYKENDDDILVSTDMCAHHLIEKI 102

Query: 257 TGDMALLSSISPVRLIKEKSMFFYELSTRSLKTRSDC 367
           +  +  + S+S V       MF +    + L T  +C
Sbjct: 103 SKIVKTIESMSNVDDQYRYCMFVFVPYAKQLLTILEC 139


>UniRef50_Q8MQC1 Cluster: Putative uncharacterized protein; n=3;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 275

 Score = 31.1 bits (67), Expect = 8.9
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 128 FGDDLLPVHKSVFYHL-LVHFLPYKQQDADIISD 226
           FGD +  V  SVF  +  V +LPY+QQ +D++ D
Sbjct: 219 FGDRITSVDCSVFGQIGAVFYLPYRQQISDLLED 252


>UniRef50_Q7QWA0 Cluster: GLP_177_40819_34538; n=1; Giardia lamblia
            ATCC 50803|Rep: GLP_177_40819_34538 - Giardia lamblia
            ATCC 50803
          Length = 2093

 Score = 31.1 bits (67), Expect = 8.9
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 9    IIITIRLSLVQYFQRLLASRLNDLKYLYSLISRFEN 116
            +++   +S V YF++L  SRL  +K+LYS I    N
Sbjct: 1415 VLLECLVSTVPYFEKLTISRLTWIKHLYSTIKTQRN 1450


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 373,927,435
Number of Sequences: 1657284
Number of extensions: 6602290
Number of successful extensions: 16435
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16433
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18196175969
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)