Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25c03
         (409 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    22   2.3  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   2.3  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   2.3  
X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       22   3.1  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   7.1  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   7.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   7.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   7.1  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   9.4  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = +2

Query: 281 SISPVRLIKEKSMFFYELSTR 343
           S+SP+ +   +++FF+ LS+R
Sbjct: 262 SLSPIAVNGYRTLFFHPLSSR 282


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 163 FLPSPCTLFTLQTAR 207
           FLP  C LFT++  R
Sbjct: 125 FLPEDCLLFTIELDR 139


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 163 FLPSPCTLFTLQTAR 207
           FLP  C LFT++  R
Sbjct: 140 FLPEDCLLFTIELDR 154


>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = +2

Query: 191 PYKQQDADIISDKESGAGHLKK---TGDMALLSSISPVR 298
           P  + +AD  +D E+G G + K   TG  AL+S I   R
Sbjct: 29  PEPEAEADAEADPEAGIGAVLKVLTTGLPALISWIKRKR 67


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/20 (30%), Positives = 16/20 (80%)
 Frame = +2

Query: 281 SISPVRLIKEKSMFFYELST 340
           ++SPV +  ++++FF+ +S+
Sbjct: 379 ALSPVDIHDDRTLFFHPMSS 398


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 75  DLKYLYSLISRFENFTAFLVMT 140
           D KY+  +I R + +  FLV T
Sbjct: 470 DWKYVAMVIDRLQLYIFFLVTT 491


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 197  CKVKSVQGDGKKHF 156
            C+V++ QG+ K H+
Sbjct: 1384 CQVENAQGNDKLHY 1397


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 197  CKVKSVQGDGKKHF 156
            C+V++ QG+ K H+
Sbjct: 1380 CQVENAQGNDKLHY 1393


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 79  KSFRRLANNLWKYCTRLNLIVIIM*H 2
           ++FR L NNL  + T L+ +  ++ H
Sbjct: 158 RAFRCLGNNLTAFLTTLDGVNDVVQH 183


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,210
Number of Sequences: 438
Number of extensions: 2035
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)