Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25b21
         (614 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70682-9|CAA94587.2|  460|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z70680-9|CAA94576.2|  460|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z50044-6|CAA90358.1|  223|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z70034-10|CAI79119.2|  560|Caenorhabditis elegans Hypothetical p...    28   6.1  
Z70034-3|CAA93860.2|  620|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z70034-2|CAA93854.3|  623|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF078785-4|AAC27089.3|  609|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z70682-9|CAA94587.2|  460|Caenorhabditis elegans Hypothetical
           protein C25G4.1 protein.
          Length = 460

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = -1

Query: 404 HDLRRQVSEVVDPAIILIFAHPVLAEEG*QPALYSRH--QKPPCCLR 270
           H+L +  S ++ P++ L+FA  VLA +   P   S H  +K  CC +
Sbjct: 267 HNLFKIFSNMLFPSLFLVFASAVLASDDLNPCNSSWHFFKKTGCCYK 313


>Z70680-9|CAA94576.2|  460|Caenorhabditis elegans Hypothetical
           protein C25G4.1 protein.
          Length = 460

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = -1

Query: 404 HDLRRQVSEVVDPAIILIFAHPVLAEEG*QPALYSRH--QKPPCCLR 270
           H+L +  S ++ P++ L+FA  VLA +   P   S H  +K  CC +
Sbjct: 267 HNLFKIFSNMLFPSLFLVFASAVLASDDLNPCNSSWHFFKKTGCCYK 313


>Z50044-6|CAA90358.1|  223|Caenorhabditis elegans Hypothetical
           protein F22B5.6 protein.
          Length = 223

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = -1

Query: 197 MDNNPGNFCMYPSCPLSIHIPRRKRPRLIAV*LAIAEVVFRLWLNSLCHVL 45
           M N  G F    SC LS  I ++KRP      L +  V    WL +  H++
Sbjct: 1   MKNPYGTFAYVNSCCLSTWISQKKRPSYFLEALILPTVPESWWLLAQYHII 51


>Z70034-10|CAI79119.2|  560|Caenorhabditis elegans Hypothetical
           protein C18E9.3c protein.
          Length = 560

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 498 PTRLTTQRQPIHLQWVSRNHHKLNQ 572
           PT   T+ QP+     SR+HHKLNQ
Sbjct: 95  PTSADTEEQPV-TNVRSRSHHKLNQ 118


>Z70034-3|CAA93860.2|  620|Caenorhabditis elegans Hypothetical
           protein C18E9.3b protein.
          Length = 620

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 498 PTRLTTQRQPIHLQWVSRNHHKLNQ 572
           PT   T+ QP+     SR+HHKLNQ
Sbjct: 155 PTSADTEEQPV-TNVRSRSHHKLNQ 178


>Z70034-2|CAA93854.3|  623|Caenorhabditis elegans Hypothetical
           protein C18E9.3a protein.
          Length = 623

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 498 PTRLTTQRQPIHLQWVSRNHHKLNQ 572
           PT   T+ QP+     SR+HHKLNQ
Sbjct: 158 PTSADTEEQPV-TNVRSRSHHKLNQ 181


>Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical
           protein M02G9.1 protein.
          Length = 909

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -3

Query: 132 PKAP-SSDCCLACNSRSCFPSLVEFVVSRFDRSTWAFCEATC 10
           P+A  +SDC   C  R+C PS  +   + F  ST   CE+TC
Sbjct: 67  PRAEINSDCSATC-VRACIPSCSKSTGNTFACST--TCESTC 105


>AF078785-4|AAC27089.3|  609|Caenorhabditis elegans Hypothetical
           protein C04E12.4 protein.
          Length = 609

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +3

Query: 426 GLLKVLARFVRYRPNGRPHFRLYLPTR--LTTQRQPIHLQWVSRNHHKLNQHHPL 584
           G+L V A  +       P   L  P+   L TQ +PIHL+  S+N +   Q+ P+
Sbjct: 40  GVLVVSATILVALSGTTPSSHLAAPSHKALATQEEPIHLENDSQNRYVEFQYDPI 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,623,086
Number of Sequences: 27780
Number of extensions: 308721
Number of successful extensions: 996
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)