Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25b21
(614 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 24 1.0
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 24 1.4
S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor prot... 21 9.6
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 9.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 9.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 9.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 9.6
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 21 9.6
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 9.6
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 21 9.6
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 21 9.6
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 9.6
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 21 9.6
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 24.2 bits (50), Expect = 1.0
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 501 TRLTTQRQPIHLQWVSRNHHKLNQHHPL 584
T TT I + + R+HH N HH L
Sbjct: 124 TATTTATGLIKQETLQRHHHLQNHHHHL 151
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 23.8 bits (49), Expect = 1.4
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -3
Query: 123 PSSDCCLACNSRSCFPSLVEFVVSRFDRSTWAFCEATCR-NF 1
P++ + S SC PS+ D S+W + CR NF
Sbjct: 146 PTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINF 187
>S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor
protein.
Length = 90
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 179 FRDCYPLFKVA 211
FRD PLFK+A
Sbjct: 38 FRDLQPLFKLA 48
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 181 PGLLSIV*SCRPFWLGW 231
PG++ + S FWL W
Sbjct: 310 PGIILVTSSFITFWLEW 326
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 181 PGLLSIV*SCRPFWLGW 231
PG++ + S FWL W
Sbjct: 279 PGIILVTSSFITFWLEW 295
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 181 PGLLSIV*SCRPFWLGW 231
PG++ + S FWL W
Sbjct: 330 PGIILVTSSFITFWLEW 346
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 181 PGLLSIV*SCRPFWLGW 231
PG++ + S FWL W
Sbjct: 279 PGIILVTSSFITFWLEW 295
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.0 bits (42), Expect = 9.6
Identities = 6/19 (31%), Positives = 13/19 (68%)
Frame = -1
Query: 89 EVVFRLWLNSLCHVLIGLH 33
E+ +++ L S C +++G H
Sbjct: 205 ELAYKMGLESTCTLILGRH 223
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 251 RNVPSPNHPSQKGRQL*TMDN 189
RN+ S +H +K +QL DN
Sbjct: 3 RNISSYSHHDEKFKQLRNEDN 23
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = +1
Query: 460 TGPMAAHTSASTYPPA*PHSANPSTCN 540
T P + + + YPP P S + C+
Sbjct: 85 TSPSGQNKAVAPYPPNHPLSGSKHLCS 111
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = +1
Query: 460 TGPMAAHTSASTYPPA*PHSANPSTCN 540
T P + + + YPP P S + C+
Sbjct: 85 TSPSGQNKAVAPYPPNHPLSGSKHLCS 111
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/41 (19%), Positives = 19/41 (46%)
Frame = +3
Query: 96 CKLDSNQTRALSARNVYRQWARRVHAKVSGIVIHCLKLPTF 218
C L+ N + + + +++R + G+V ++P F
Sbjct: 219 CPLNPNPQPLTGQQELLQDFSKRFSPAIRGVVEFAKRIPGF 259
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 188 CYPLFKVADLSGWD 229
C P K+ADLS D
Sbjct: 430 CKPKLKIADLSAHD 443
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,228
Number of Sequences: 438
Number of extensions: 3525
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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