Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25b16
(686 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 34 0.55
BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein. 32 2.2
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 32 2.2
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 32 2.2
AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane muc... 32 2.2
AF016692-1|AAB71685.1| 648|Homo sapiens small intestinal mucin ... 32 2.2
M64594-1|AAA63230.1| 610|Homo sapiens mucin protein. 31 2.9
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 31 2.9
AY017307-1|AAG52948.1| 3389|Homo sapiens CUB and sushi multiple ... 30 6.7
AF333704-1|AAK73475.2| 3566|Homo sapiens CUB and sushi multiple ... 30 6.7
AB209502-1|BAD92739.1| 2966|Homo sapiens CUB and Sushi multiple ... 30 6.7
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 33.9 bits (74), Expect = 0.55
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Frame = -2
Query: 256 PLTDASFSTSTFLSQPLRVSWALTGATTTAVSYWSIAST-----TLWTAVHPTRTVSFRT 92
P T A+ ST+T S P +W LT TTTA + S ST TL TA P + T
Sbjct: 1090 PSTPATSSTATPSSTP-GTTWILTELTTTATTTESTGSTATPTSTLRTAPPPKVLTTTAT 1148
Query: 91 FPV----KMTPMWNPSSRWSTVFMSSLSTVVVAS 2
P K TP +P + + + S +T A+
Sbjct: 1149 TPTVTSSKATPSSSPGTATALPALRSTATTPTAT 1182
>BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein.
Length = 1224
Score = 31.9 bits (69), Expect = 2.2
Identities = 25/88 (28%), Positives = 39/88 (44%)
Frame = -2
Query: 283 ISAARS*IFPLTDASFSTSTFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTV 104
++++ + +FP T + ST S L + +TTT+ S +T T P V
Sbjct: 677 VTSSTADVFPATTGAVSTPVITSTELNTPSTSSSSTTTSFSTTKEFTTPAMTTAAPLTYV 736
Query: 103 SFRTFPVKMTPMWNPSSRWSTVFMSSLS 20
+ T P TP +SR T S+LS
Sbjct: 737 TMSTAP--STP--RTTSRGCTTSASTLS 760
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 31.9 bits (69), Expect = 2.2
Identities = 25/88 (28%), Positives = 39/88 (44%)
Frame = -2
Query: 283 ISAARS*IFPLTDASFSTSTFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTV 104
++++ + +FP T + ST S L + +TTT+ S +T T P V
Sbjct: 3946 VTSSTADVFPATTGAVSTPVITSTELNTPSTSSSSTTTSFSTTKEFTTPAMTTAAPLTYV 4005
Query: 103 SFRTFPVKMTPMWNPSSRWSTVFMSSLS 20
+ T P TP +SR T S+LS
Sbjct: 4006 TMSTAP--STP--RTTSRGCTTSASTLS 4029
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 31.9 bits (69), Expect = 2.2
Identities = 25/88 (28%), Positives = 39/88 (44%)
Frame = -2
Query: 283 ISAARS*IFPLTDASFSTSTFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTV 104
++++ + +FP T + ST S L + +TTT+ S +T T P V
Sbjct: 3946 VTSSTADVFPATTGAVSTPVITSTELNTPSTSSSSTTTSFSTTKEFTTPAMTTAAPLTYV 4005
Query: 103 SFRTFPVKMTPMWNPSSRWSTVFMSSLS 20
+ T P TP +SR T S+LS
Sbjct: 4006 TMSTAP--STP--RTTSRGCTTSASTLS 4029
>AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane mucin
MUC17 protein.
Length = 1029
Score = 31.9 bits (69), Expect = 2.2
Identities = 25/88 (28%), Positives = 39/88 (44%)
Frame = -2
Query: 283 ISAARS*IFPLTDASFSTSTFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTV 104
++++ + +FP T + ST S L + +TTT+ S +T T P V
Sbjct: 482 VTSSTADVFPATTGAVSTPVITSTELNTPSTSSSSTTTSFSTTKEFTTPAMTTAAPLTYV 541
Query: 103 SFRTFPVKMTPMWNPSSRWSTVFMSSLS 20
+ T P TP +SR T S+LS
Sbjct: 542 TMSTAP--STP--RTTSRGCTTSASTLS 565
>AF016692-1|AAB71685.1| 648|Homo sapiens small intestinal mucin
MUC3 protein.
Length = 648
Score = 31.9 bits (69), Expect = 2.2
Identities = 25/88 (28%), Positives = 39/88 (44%)
Frame = -2
Query: 283 ISAARS*IFPLTDASFSTSTFLSQPLRVSWALTGATTTAVSYWSIASTTLWTAVHPTRTV 104
++++ + +FP T + ST S L + +TTT+ S +T T P V
Sbjct: 482 VTSSTADVFPATTGAVSTPVITSTELNTPSTSSSSTTTSFSTTKEFTTPAMTTAAPLTYV 541
Query: 103 SFRTFPVKMTPMWNPSSRWSTVFMSSLS 20
+ T P TP +SR T S+LS
Sbjct: 542 TMSTAP--STP--RTTSRGCTTSASTLS 565
>M64594-1|AAA63230.1| 610|Homo sapiens mucin protein.
Length = 610
Score = 31.5 bits (68), Expect = 2.9
Identities = 35/89 (39%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Frame = -2
Query: 256 PLTDASFSTSTFLSQPLRV---SWALTG-ATTTAVSYWSIASTTLWTAVHPTRTVSFRTF 89
P+TD S S ST + PL V S A TG AT V+ S AST T +H T S T
Sbjct: 477 PVTDTS-SASTGHATPLPVTDTSSASTGHATPLLVTDTSSASTGHTTPLHVTSPSSASTG 535
Query: 88 PVKMTPMWNPSSRWSTVFMSSLSTVVVAS 2
P+ +PSS ST +SL +S
Sbjct: 536 HATPLPVTSPSSA-STSHATSLPVTDTSS 563
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 31.5 bits (68), Expect = 2.9
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -2
Query: 250 TDASFSTSTFLSQPLRVSWALTGATTTAVSYWSI-ASTTLWTAVHPTRTVSFRTFPVKMT 74
T ++ +TST + +S A T +TT+A + +I A TT T+ H T T S T T
Sbjct: 815 TTSAPTTSTTSTPQTSISSAPTSSTTSAPTASTISAPTTSTTSFHTTSTTSPPTSSTSST 874
Query: 73 PMWNPSS 53
P + +S
Sbjct: 875 PQTSKTS 881
>AY017307-1|AAG52948.1| 3389|Homo sapiens CUB and sushi multiple
domains protein 1 short form protein.
Length = 3389
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +2
Query: 149 YGPIRHSRCRGSRKSPGNSQRLTQEGRCRKRCICQWKNSRPCCT 280
YG + H CRGS GN R+ QE W + P CT
Sbjct: 2821 YGAVVHYSCRGSESLIGNDTRVCQED-------SHWSGALPHCT 2857
>AF333704-1|AAK73475.2| 3566|Homo sapiens CUB and sushi multiple
domains 1 protein protein.
Length = 3566
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +2
Query: 149 YGPIRHSRCRGSRKSPGNSQRLTQEGRCRKRCICQWKNSRPCCT 280
YG + H CRGS GN R+ QE W + P CT
Sbjct: 2879 YGAVVHYSCRGSESLIGNDTRVCQED-------SHWSGALPHCT 2915
>AB209502-1|BAD92739.1| 2966|Homo sapiens CUB and Sushi multiple
domains 1 variant protein.
Length = 2966
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +2
Query: 149 YGPIRHSRCRGSRKSPGNSQRLTQEGRCRKRCICQWKNSRPCCT 280
YG + H CRGS GN R+ QE W + P CT
Sbjct: 2294 YGAVVHYSCRGSESLIGNDTRVCQED-------SHWSGALPHCT 2330
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,758,906
Number of Sequences: 237096
Number of extensions: 1770324
Number of successful extensions: 4315
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4314
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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