Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25b01
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        28   0.064
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.0  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   1.4  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   4.2  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   4.2  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   4.2  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      22   4.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.4  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   7.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   7.4  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   7.4  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   9.7  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   9.7  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   9.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.7  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 28.3 bits (60), Expect = 0.064
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 623 ARRDSKALIRLKAFRICFQSFAPGKRRSE 537
           + R+    I L A R+CFQ F  G+RR +
Sbjct: 191 SHRNQPTSIDLNAVRLCFQVFLEGERRGK 219


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +3

Query: 486  TIRPTAHQWSTQFTTEP 536
            T RPT   W TQ TT P
Sbjct: 1071 TTRPTTTNWPTQGTTIP 1087


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 341 PSSGGMSGHGNTGSSHGYPSSG 406
           P    M+G+G T SS GY + G
Sbjct: 59  PGGMAMNGNGMTSSSMGYTTIG 80


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 356 MSGHGNTGSSHGYPSSGGQSYP 421
           M+G G TG++       G++YP
Sbjct: 118 MTGMGGTGTAGSQADRDGKNYP 139


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 356 MSGHGNTGSSHGYPSSGGQSYP 421
           M+G G TG++       G++YP
Sbjct: 119 MTGMGGTGTAGSQADRDGKNYP 140


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 356 MSGHGNTGSSHGYPSSGGQSYP 421
           M+G G TG++       G++YP
Sbjct: 119 MTGMGGTGTAGSQADRDGKNYP 140


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = +1

Query: 496 PRPTNGLPSLPRNPSDLRLPGAKLWKQIRN 585
           P+P      + R  S +++ G+K+W+  R+
Sbjct: 57  PKPIPSFACIGRCASYIQVSGSKIWQMERS 86


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 473 PQIRYNPPHGPPMVY 517
           PQ+  N  +GP M+Y
Sbjct: 290 PQLAKNGAYGPDMIY 304


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 516 TQFTTEPLRPTFTRRKTLEANTE 584
           +QF  +  R T+TR +TLE   E
Sbjct: 238 SQFERKRGRQTYTRYQTLELEKE 260


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 359 SGHGNTGSSHGY 394
           +GHG+  SSH Y
Sbjct: 289 NGHGHNTSSHNY 300


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 516 TQFTTEPLRPTFTRRKTLEANTE 584
           +QF  +  R T+TR +TLE   E
Sbjct: 240 SQFERKRGRQTYTRYQTLELEKE 262


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 501 AHQWSTQFTTEPLRPTFTRRKTLEANTE 584
           AH  S+    +  R T+TR +TLE   E
Sbjct: 174 AHGDSSATGNKRTRQTYTRYQTLELEKE 201


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 501 AHQWSTQFTTEPLRPTFTRRKTLEANTE 584
           AH  S+    +  R T+TR +TLE   E
Sbjct: 174 AHGDSSATGNKRTRQTYTRYQTLELEKE 201


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 501 AHQWSTQFTTEPLRPTFTRRKTLEANTE 584
           AH  S+    +  R T+TR +TLE   E
Sbjct: 174 AHGDSSATGNKRTRQTYTRYQTLELEKE 201


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 507 QWSTQFTTEPLRPTFTRRKTLEANTE 584
           +W+ Q T    R  +++ +TLE   E
Sbjct: 236 EWTGQVTVRKKRKPYSKFQTLELEKE 261


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,735
Number of Sequences: 336
Number of extensions: 3598
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)