Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25b01
(702 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0242 - 1862106-1862210,1862302-1862320,1863082-1863257,186... 36 0.031
08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983 34 0.13
03_06_0471 + 34169562-34169892,34170121-34170347 33 0.17
06_01_0486 - 3455030-3455770 32 0.51
03_05_0440 + 24322332-24322388,24323478-24323615,24323654-243237... 31 1.2
01_01_0082 + 625198-625719 31 1.2
01_06_0046 + 25943183-25943590 30 1.5
01_02_0007 + 10132380-10133201 30 1.5
11_01_0359 - 2731522-2732346 29 2.7
07_01_0479 + 3606663-3607448 29 2.7
05_03_0389 - 13409848-13409964,13410049-13410114,13410209-134103... 29 2.7
10_08_0495 - 18318028-18320399,18322450-18322981,18323097-183232... 29 3.6
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 3.6
03_05_0267 - 22538631-22539452 29 3.6
02_04_0407 + 22645775-22645865,22645998-22646269 29 3.6
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072... 29 4.7
08_01_0245 + 2023442-2023786,2024485-2024841,2024951-2025393,202... 29 4.7
02_02_0331 + 9017291-9019084,9019205-9019402,9020014-9020184,902... 29 4.7
01_06_1682 - 39130696-39131705,39132355-39132583 29 4.7
10_08_0338 + 16916429-16916650,16916728-16917900 28 6.2
10_08_0213 - 15912048-15912716 28 6.2
08_01_0793 - 7685702-7686955 28 6.2
07_03_1643 + 28329090-28329125,28329260-28329335,28329413-28330305 28 6.2
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 28 6.2
01_07_0082 - 40965947-40967023 28 6.2
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 28 8.3
07_03_0570 - 19601264-19601779 28 8.3
06_01_0430 - 3058832-3058952,3059590-3059795,3060103-3060294,306... 28 8.3
05_01_0142 - 940421-940701,941262-941574 28 8.3
04_03_0904 + 20717005-20718087 28 8.3
02_03_0114 + 15410368-15410760,15412301-15412342 28 8.3
>11_01_0242 -
1862106-1862210,1862302-1862320,1863082-1863257,
1863359-1863405,1864443-1865022
Length = 308
Score = 35.9 bits (79), Expect = 0.031
Identities = 20/69 (28%), Positives = 25/69 (36%)
Frame = +2
Query: 341 PSSGGMSGHGNTGSSHGYPSSGGQSYPKXXXXXXXXXXXXXSPPPQIRYNPPHGPPMVYP 520
P GG G+G S+ Y S GG P +PP Y P+G P
Sbjct: 54 PYYGGGGGYGAPPSTQPYGSGGGYGAPPSTQRPQSYGGGYGAPPSSQPYGAPYGAPPPSS 113
Query: 521 VYHGTPPTY 547
+G P Y
Sbjct: 114 APYGAPGGY 122
>08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983
Length = 145
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/52 (40%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Frame = +2
Query: 389 GYPSSGGQSYPKXXXXXXXXXXXXXS----PPPQIRYNPPHGPPMVYPVYHG 532
GYP SG YP S PPPQ Y PPH PP P Y G
Sbjct: 43 GYPQSGPYPYPPPSGAVYPPQGYPSSHGVYPPPQGPYPPPHQPPP--PGYQG 92
>03_06_0471 + 34169562-34169892,34170121-34170347
Length = 185
Score = 33.5 bits (73), Expect = 0.17
Identities = 22/69 (31%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = +2
Query: 338 YPSSGGM-SGHGNTGSSHGYPSSGGQSYPKXXXXXXXXXXXXXSPPPQIRYNPPHGPPMV 514
YP G + G + GYPS+ YP PP Q Y P PP
Sbjct: 29 YPLMQGYPNSPGQYPTPGGYPSAPPGQYPPAGGYPGAQYPPSGYPPSQGGYPPGAYPPSG 88
Query: 515 YPVYHGTPP 541
YP G PP
Sbjct: 89 YPQQPGYPP 97
>06_01_0486 - 3455030-3455770
Length = 246
Score = 31.9 bits (69), Expect = 0.51
Identities = 22/72 (30%), Positives = 25/72 (34%), Gaps = 2/72 (2%)
Frame = +2
Query: 341 PSSGGMSGHGNTGSSHGYPSSGGQSYPKXXXXXXXXXXXXXSPPPQIR--YNPPHGPPMV 514
P G SG G+ G G S GG + K P Y PP P
Sbjct: 29 PPGSGSSGGGHHGKPPGSGSGGGGHHGKPPEHHHHHKPPPSPRCPSCHPPYTPPTPRPPP 88
Query: 515 YPVYHGTPPTYV 550
P Y +PP YV
Sbjct: 89 TPPYVPSPPPYV 100
>03_05_0440 + 24322332-24322388,24323478-24323615,24323654-24323736,
24325038-24325128,24326091-24326189,24326356-24326418,
24327182-24327259,24329354-24329543,24329812-24330065,
24330159-24330531,24331193-24331276,24332085-24332371,
24332495-24332542,24333194-24333220,24333951-24333987,
24334063-24334250,24334343-24334521,24334595-24334877,
24335481-24335717,24335798-24335988,24336552-24336561,
24336844-24336984,24337073-24337288,24338437-24338727,
24338852-24339025
Length = 1272
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +1
Query: 424 NDSYYNNTQPLSLQSPATNKIQSAPRPTNGLPSLPRNPSDL 546
N S+ +NT PATN I S+PR NG S P+ PS+L
Sbjct: 1165 NSSHQDNTTSGHFD-PATNNI-SSPRLPNGCDSEPQFPSEL 1203
>01_01_0082 + 625198-625719
Length = 173
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 467 PPPQIRYNPPHGPPMVYP 520
PPP + Y PP PP+ YP
Sbjct: 67 PPPPVYYPPPSPPPVAYP 84
>01_06_0046 + 25943183-25943590
Length = 135
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 467 PPPQIRYNPPHGPPMVYPVYHGTPPTYVYQAQNSGSK 577
PPP Y+PP PP YP + PP Y G++
Sbjct: 58 PPPYYYYSPP--PPAYYPGSYCPPPPAAYVQFGGGAQ 92
>01_02_0007 + 10132380-10133201
Length = 273
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = +1
Query: 442 NTQPLSLQSPATNKIQSAPRPTNGLPSLPRNPSDLRLPGAKLWKQIRNA 588
N PL L P N Q P+P PSLP D P L + NA
Sbjct: 135 NAPPLPLPQPNPNNPQPLPQPDPNAPSLPLPQPDPNAPPLPLPQPDPNA 183
>11_01_0359 - 2731522-2732346
Length = 274
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 464 SPPPQIRYNPPHGPPMVYPVYHGTPP 541
+PPP +PP PP Y +H PP
Sbjct: 43 APPPHSHSHPPPPPPHAYHHHHYPPP 68
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 467 PPPQIRYNPPHGPPMVYPVYHGTPP 541
P P +R PP GPP V P G PP
Sbjct: 205 PGPFMRGPPPMGPPQVRPGMPGGPP 229
>05_03_0389 -
13409848-13409964,13410049-13410114,13410209-13410325,
13410822-13410893,13410979-13411258,13411528-13411730,
13412230-13412316,13412705-13412758,13413042-13413221,
13414402-13414576,13414628-13414918,13414923-13415344
Length = 687
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/70 (27%), Positives = 29/70 (41%)
Frame = +1
Query: 406 RTELPKNDSYYNNTQPLSLQSPATNKIQSAPRPTNGLPSLPRNPSDLRLPGAKLWKQIRN 585
R + +YN + + L SP ++ + NGL RN D+ GA L K ++
Sbjct: 125 RRRISSFQEFYNVCRNICLSSPWDGQLAHSTEFYNGLTVSSRNHLDVTAGGAFLSKTVKG 184
Query: 586 AFSRISAFES 615
A I S
Sbjct: 185 AVDLIEKIVS 194
>10_08_0495 -
18318028-18320399,18322450-18322981,18323097-18323200,
18323653-18323701,18323979-18324119,18324889-18324957,
18325048-18325137,18325301-18326251,18326831-18327502
Length = 1659
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/72 (31%), Positives = 26/72 (36%)
Frame = +2
Query: 341 PSSGGMSGHGNTGSSHGYPSSGGQSYPKXXXXXXXXXXXXXSPPPQIRYNPPHGPPMVYP 520
PSS G G G S G S P+ +PP Q PP+G P P
Sbjct: 756 PSSHAPHAQGPYGVPPGGDSRPGYSQPEQRPAYSQPYPPYGAPPQQ----PPYGAPSQQP 811
Query: 521 VYHGTPPTYVYQ 556
Y G P YQ
Sbjct: 812 PY-GAPHPGHYQ 822
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 467 PPPQIRYNPPHGPPMVYPVYHGTPP 541
PPPQ+ Y PP PP Y V PP
Sbjct: 84 PPPQMYYQPP-PPPPPYGVNSSQPP 107
>03_05_0267 - 22538631-22539452
Length = 273
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/64 (31%), Positives = 25/64 (39%)
Frame = +2
Query: 350 GGMSGHGNTGSSHGYPSSGGQSYPKXXXXXXXXXXXXXSPPPQIRYNPPHGPPMVYPVYH 529
GG G G GSS G S GG S + P + R +PP P +P
Sbjct: 127 GGGGGLGGGGSSGGEGSGGGSSDGEGCGDGSGGGELGGGPTVRRRASPP-ARPRWWPCSP 185
Query: 530 GTPP 541
+PP
Sbjct: 186 SSPP 189
>02_04_0407 + 22645775-22645865,22645998-22646269
Length = 120
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +2
Query: 338 YPSSGGMSGHGNTGSSHGYPS-SGGQSYP 421
YP GG G+G G +GYP GG YP
Sbjct: 52 YPPRGG--GYGYPGRGYGYPGRGGGGGYP 78
>10_08_0425 -
17806117-17806401,17806862-17806984,17807076-17807222,
17807307-17807450,17808557-17808668,17808762-17808898,
17809016-17809156,17810921-17811004,17811275-17811742,
17811858-17811936,17812494-17812506,17813884-17814460,
17814502-17814774,17814899-17815045,17815354-17815413,
17816124-17816510
Length = 1058
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = +1
Query: 445 TQPLSLQSPATNKIQSAPRPTNG----LPSLPRNPSDLRLPG 558
T P + S +AP PT+G PS+P NP+ PG
Sbjct: 41 TTPAVVDSAVEGDAPAAPAPTSGSGPAAPSMPANPASPATPG 82
>08_01_0245 +
2023442-2023786,2024485-2024841,2024951-2025393,
2025475-2025569,2026302-2026477
Length = 471
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 180 PEDFLVTADCQGRADTDIHLLAAYL 254
P+ V +C GR D D+H + YL
Sbjct: 445 PDGVRVVVNCSGRGDKDVHTASKYL 469
>02_02_0331 +
9017291-9019084,9019205-9019402,9020014-9020184,
9020292-9020435,9020552-9020764,9020859-9021929,
9022365-9022391
Length = 1205
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +2
Query: 467 PPPQIRYNPPHGP-PMVYPVYHGTPPTY 547
PPP + Y+ P P YP Y PP Y
Sbjct: 48 PPPHLYYHGPFPQHPNAYPSYFARPPPY 75
>01_06_1682 - 39130696-39131705,39132355-39132583
Length = 412
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 464 SPPPQIRYNPPHGPPMVYPVYHGTPP 541
SPPPQ +++PP + P+ H PP
Sbjct: 284 SPPPQYQHSPPANSYVSPPLAHQYPP 309
>10_08_0338 + 16916429-16916650,16916728-16917900
Length = 464
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 338 YPSSGGMSGHGNTGSSHGYPSSGGQS 415
Y + GG G+G G G P++GG S
Sbjct: 384 YGNHGGYGGYGGRGDGAGNPAAGGGS 409
>10_08_0213 - 15912048-15912716
Length = 222
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 338 YPSSGGMSGHGNTGSSHGYPSSGGQSY 418
Y S GG G G G GY S G Y
Sbjct: 187 YASGGGGGGGGGQGGGSGYGSGSGYGY 213
>08_01_0793 - 7685702-7686955
Length = 417
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 470 PPQIRYNPPHGPPMVYPVYHGTPPTYV-YQAQNS 568
PP + P GPP Y +Y +PP + +Q Q S
Sbjct: 50 PPNFQTFNPFGPPANYHLYGSSPPNFQGFQQQAS 83
>07_03_1643 + 28329090-28329125,28329260-28329335,28329413-28330305
Length = 334
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 467 PPPQIRYNPPHGPPMVYPVYHGTPPTYVY 553
PPPQ+ Y PPM+ P PP Y+Y
Sbjct: 279 PPPQMSYGYSPYPPMMMP--PPPPPEYLY 305
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 350 GGMSGHGNTGSSHGYPSSGGQSY 418
GG G+G G GY S GG+ Y
Sbjct: 71 GGGRGYGGGGGGGGYESGGGRGY 93
>01_07_0082 - 40965947-40967023
Length = 358
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/78 (29%), Positives = 27/78 (34%), Gaps = 6/78 (7%)
Frame = +2
Query: 338 YPSSGGMSGHGNTGSS-HGYPSSGGQS----YPKXXXXXXXXXXXXXSPPPQIRYNPPHG 502
YP + G S G YP++ G S Y PPPQ Y P
Sbjct: 221 YPPATGSSKPAKAGEPVTAYPAAAGPSTAAPYGTAPPPQYGYGYPAQPPPPQAGYGYPPP 280
Query: 503 PPMV-YPVYHGTPPTYVY 553
PP Y +G PP Y
Sbjct: 281 PPQAGYGGGYGYPPQAGY 298
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/62 (29%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Frame = +2
Query: 362 GHGNTGSSHGYPSSGGQSYPKXXXXXXXXXXXXXSPPPQIRYNPPHGPPMVYPVYHGTP- 538
G+G SS P + + P PPP + P H PP+ P TP
Sbjct: 406 GYGGASSSSAMPHA--TTAPLALRAPAPHLCVSRMPPPLVPTPPAHAPPVATPPTLATPV 463
Query: 539 PT 544
PT
Sbjct: 464 PT 465
>07_03_0570 - 19601264-19601779
Length = 171
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 385 PRLSVFRRTELPKNDSYYNNTQPLSLQSPATNKIQSAPRPTNGLPSLPR 531
PR FR + D +P +PA +APRPT + SLPR
Sbjct: 105 PRDDPFRTVRVAVKDVKLPAPRPAPTLTPAN---MAAPRPTTAVKSLPR 150
>06_01_0430 -
3058832-3058952,3059590-3059795,3060103-3060294,
3061241-3061287,3062233-3062455
Length = 262
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/62 (25%), Positives = 19/62 (30%)
Frame = +2
Query: 353 GMSGHGNTGSSHGYPSSGGQSYPKXXXXXXXXXXXXXSPPPQIRYNPPHGPPMVYPVYHG 532
G G G+ G G YP+ PP+ HGPP V H
Sbjct: 7 GRPGSGSYGGGVGGGGGSSSLYPRVGQPSHGVANAPPPEPPRAAPYHHHGPPTVSAAPHP 66
Query: 533 TP 538
P
Sbjct: 67 VP 68
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 27.9 bits (59), Expect = 8.3
Identities = 25/75 (33%), Positives = 26/75 (34%), Gaps = 16/75 (21%)
Frame = +2
Query: 365 HGNTGSSHGYPSSGG---QSYPKXXXXXXXXXXXXXSPP-----PQIRYNPPHG------ 502
HG G HGYP G Q YP PP P Y P HG
Sbjct: 21 HGVAGG-HGYPPHQGYPPQGYPPPPGAYPPPPGAYPPPPGAYPPPPGAYPPQHGYPQPGG 79
Query: 503 --PPMVYPVYHGTPP 541
PP YP + G PP
Sbjct: 80 YPPPGGYPQHGGYPP 94
>04_03_0904 + 20717005-20718087
Length = 360
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 464 SPPPQIRYNPPHGPPMVYPVYHGTPPTY 547
+PPP + P PP P Y PPTY
Sbjct: 225 NPPPTYKPQPKPNPP---PTYKPAPPTY 249
>02_03_0114 + 15410368-15410760,15412301-15412342
Length = 144
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = -2
Query: 692 RTCKFRLVSACRWSGYARKPFQPARRDSKALIRLKAFRICFQSFAPG 552
R C RL + Y +PF PA D IR A +CF S G
Sbjct: 76 RFCNGRLATDFYSEAYGLRPFVPAYLDPDYGIRDFATGVCFASAGSG 122
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,197,221
Number of Sequences: 37544
Number of extensions: 414206
Number of successful extensions: 1926
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1901
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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