Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25b01
(702 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064693-1|AAH64693.1| 1235|Homo sapiens AUTS2 protein protein. 31 3.0
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 31 3.0
AF326917-1|AAL37411.1| 1259|Homo sapiens autism-related protein ... 31 3.0
AC073873-1|AAS07468.1| 1011|Homo sapiens unknown protein. 31 3.0
AB007902-1|BAA23714.2| 1266|Homo sapiens KIAA0442 protein. 31 3.0
U91935-1|AAB49728.1| 648|Homo sapiens retina-derived POU-domain... 31 5.3
U91934-1|AAB49727.1| 684|Homo sapiens retina-derived POU-domain... 31 5.3
BC104445-1|AAI04446.1| 197|Homo sapiens transmembrane protein 5... 31 5.3
AY358589-1|AAQ88952.1| 197|Homo sapiens PPAG583 protein. 31 5.3
AL137724-1|CAB70894.1| 439|Homo sapiens hypothetical protein pr... 31 5.3
AC078834-1|AAS01989.1| 439|Homo sapiens unknown protein. 31 5.3
X17568-1|CAB57868.1| 240|Homo sapiens snRNP B' protein protein. 30 7.0
X17567-1|CAB57867.1| 231|Homo sapiens snRNP B protein protein. 30 7.0
X15893-1|CAA33902.1| 231|Homo sapiens protein ( Human B cod gen... 30 7.0
M34082-1|AAA36579.1| 233|Homo sapiens protein ( Human small nuc... 30 7.0
M34081-1|AAA36578.1| 224|Homo sapiens protein ( Human small nuc... 30 7.0
L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein prot... 30 7.0
L19605-1|AAA19734.1| 505|Homo sapiens 56K autoantigen protein. 30 7.0
CR456969-1|CAG33250.1| 240|Homo sapiens SNRPB protein. 30 7.0
CR450323-1|CAG29319.1| 505|Homo sapiens ANXA11 protein. 30 7.0
BT019934-1|AAV38737.1| 505|Homo sapiens annexin A11 protein. 30 7.0
BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b, sub... 30 7.0
BC080516-1|AAH80516.1| 231|Homo sapiens small nuclear ribonucle... 30 7.0
BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b, sub... 30 7.0
BC007564-1|AAH07564.1| 505|Homo sapiens annexin A11 protein. 30 7.0
BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b, sub... 30 7.0
BC003530-1|AAH03530.1| 234|Homo sapiens SNRPB protein protein. 30 7.0
AY742712-1|AAU89981.1| 231|Homo sapiens small nuclear ribonucle... 30 7.0
AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b, sub... 30 7.0
AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b, sub... 30 7.0
AL513174-3|CAI13917.1| 204|Homo sapiens annexin A11 protein. 30 7.0
AL513174-2|CAI13916.1| 505|Homo sapiens annexin A11 protein. 30 7.0
AL513174-1|CAI13915.1| 150|Homo sapiens annexin A11 protein. 30 7.0
AL356095-2|CAI40438.1| 204|Homo sapiens annexin A11 protein. 30 7.0
AL356095-1|CAI40437.1| 505|Homo sapiens annexin A11 protein. 30 7.0
AL355987-6|CAI12681.1| 401|Homo sapiens KIAA1984 protein. 30 7.0
AL049650-8|CAB46715.1| 240|Homo sapiens small nuclear ribonucle... 30 7.0
AL049650-7|CAB46714.1| 231|Homo sapiens small nuclear ribonucle... 30 7.0
AL031665-7|CAI21758.2| 154|Homo sapiens chromosome 20 open read... 30 7.0
AL031665-6|CAC16505.1| 256|Homo sapiens chromosome 20 open read... 30 7.0
AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b, sub... 30 7.0
AK222918-1|BAD96638.1| 505|Homo sapiens annexin A11 variant pro... 30 7.0
AK002052-1|BAA92058.1| 256|Homo sapiens protein ( Homo sapiens ... 30 7.0
AJ278465-1|CAB94997.1| 505|Homo sapiens annexin A11 protein. 30 7.0
AJ278464-1|CAB94996.1| 505|Homo sapiens annexin A11 protein. 30 7.0
AJ278463-1|CAB94995.1| 505|Homo sapiens annexin A11 protein. 30 7.0
AB209770-1|BAD93007.1| 510|Homo sapiens annexin A11 variant pro... 30 7.0
DQ109556-1|AAZ99795.1| 911|Homo sapiens adaptor protein HOFI pr... 30 9.2
BC111855-1|AAI11856.1| 197|Homo sapiens transmembrane protein 5... 30 9.2
BC104444-1|AAI04445.1| 197|Homo sapiens transmembrane protein 5... 30 9.2
BC061908-1|AAH61908.1| 176|Homo sapiens TMEM58 protein protein. 30 9.2
BC009558-1|AAH09558.1| 228|Homo sapiens TMEM58 protein protein. 30 9.2
AL513217-1|CAH72277.1| 197|Homo sapiens transmembrane protein 5... 30 9.2
AK001267-1|BAA91590.1| 639|Homo sapiens protein ( Homo sapiens ... 30 9.2
AC093727-1|AAX81992.1| 639|Homo sapiens unknown protein. 30 9.2
AC005483-1|AAC83404.2| 484|Homo sapiens unknown protein. 30 9.2
AB037716-1|BAA92533.1| 550|Homo sapiens KIAA1295 protein protein. 30 9.2
>BC064693-1|AAH64693.1| 1235|Homo sapiens AUTS2 protein protein.
Length = 1235
Score = 31.5 bits (68), Expect = 3.0
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = +1
Query: 385 PRLSVFRRTELPKNDSYYNNTQPLSLQSPATNKIQSAPRPTNGLPSLPRNPSDL---RLP 555
P + +RTE P + P Q P ++Q AP+P P P++P+ L LP
Sbjct: 320 PDPDLVQRTEAPPQPPPLSTQPP---QGPPEAQLQPAPQPQVQRPPRPQSPTQLLHQNLP 376
Query: 556 GAKLWKQIRNAFSRISAFESRRAGWNGL 639
+ ++ +SA+ S N L
Sbjct: 377 PVQAHPSAQSLSQPLSAYNSSSLSLNSL 404
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 31.5 bits (68), Expect = 3.0
Identities = 23/72 (31%), Positives = 26/72 (36%), Gaps = 7/72 (9%)
Frame = +2
Query: 347 SGGMSGHGNTGSSHGYPSSGGQS------YPKXXXXXXXXXXXXXSPPPQIR-YNPPHGP 505
SG MSG G G P + G +P PPP + Y PP GP
Sbjct: 177 SGQMSGEGKAGPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGP 236
Query: 506 PMVYPVYHGTPP 541
P P G PP
Sbjct: 237 P---PPQQGPPP 245
>AF326917-1|AAL37411.1| 1259|Homo sapiens autism-related protein 1
protein.
Length = 1259
Score = 31.5 bits (68), Expect = 3.0
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = +1
Query: 385 PRLSVFRRTELPKNDSYYNNTQPLSLQSPATNKIQSAPRPTNGLPSLPRNPSDL---RLP 555
P + +RTE P + P Q P ++Q AP+P P P++P+ L LP
Sbjct: 320 PDPDLVQRTEAPPQPPPLSTQPP---QGPPEAQLQPAPQPQVQRPPRPQSPTQLLHQNLP 376
Query: 556 GAKLWKQIRNAFSRISAFESRRAGWNGL 639
+ ++ +SA+ S N L
Sbjct: 377 PVQAHPSAQSLSQPLSAYNSSSLSLNSL 404
>AC073873-1|AAS07468.1| 1011|Homo sapiens unknown protein.
Length = 1011
Score = 31.5 bits (68), Expect = 3.0
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = +1
Query: 385 PRLSVFRRTELPKNDSYYNNTQPLSLQSPATNKIQSAPRPTNGLPSLPRNPSDL---RLP 555
P + +RTE P + P Q P ++Q AP+P P P++P+ L LP
Sbjct: 72 PDPDLVQRTEAPPQPPPLSTQPP---QGPPEAQLQPAPQPQVQRPPRPQSPTQLLHQNLP 128
Query: 556 GAKLWKQIRNAFSRISAFESRRAGWNGL 639
+ ++ +SA+ S N L
Sbjct: 129 PVQAHPSAQSLSQPLSAYNSSSLSLNSL 156
>AB007902-1|BAA23714.2| 1266|Homo sapiens KIAA0442 protein.
Length = 1266
Score = 31.5 bits (68), Expect = 3.0
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = +1
Query: 385 PRLSVFRRTELPKNDSYYNNTQPLSLQSPATNKIQSAPRPTNGLPSLPRNPSDL---RLP 555
P + +RTE P + P Q P ++Q AP+P P P++P+ L LP
Sbjct: 351 PDPDLVQRTEAPPQPPPLSTQPP---QGPPEAQLQPAPQPQVQRPPRPQSPTQLLHQNLP 407
Query: 556 GAKLWKQIRNAFSRISAFESRRAGWNGL 639
+ ++ +SA+ S N L
Sbjct: 408 PVQAHPSAQSLSQPLSAYNSSSLSLNSL 435
>U91935-1|AAB49728.1| 648|Homo sapiens retina-derived POU-domain
factor-1 protein.
Length = 648
Score = 30.7 bits (66), Expect = 5.3
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +1
Query: 436 YNNTQPLSLQSPATNKIQSAPRPTNGLPSLPRNPSDLRLPGAKLWKQIRNAFSRISAFES 615
+N QP Q ++ + + P +GLPS P+ L+L L Q A + +S+ S
Sbjct: 251 HNQNQPSPTQQSSSPPQKPSQSPGHGLPSPLTPPNPLQLVNNPLASQAAAAAAAMSSIAS 310
Query: 616 RRAGWNGL 639
+A N L
Sbjct: 311 SQAFGNAL 318
>U91934-1|AAB49727.1| 684|Homo sapiens retina-derived POU-domain
factor-1 protein.
Length = 684
Score = 30.7 bits (66), Expect = 5.3
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +1
Query: 436 YNNTQPLSLQSPATNKIQSAPRPTNGLPSLPRNPSDLRLPGAKLWKQIRNAFSRISAFES 615
+N QP Q ++ + + P +GLPS P+ L+L L Q A + +S+ S
Sbjct: 251 HNQNQPSPTQQSSSPPQKPSQSPGHGLPSPLTPPNPLQLVNNPLASQAAAAAAAMSSIAS 310
Query: 616 RRAGWNGL 639
+A N L
Sbjct: 311 SQAFGNAL 318
>BC104445-1|AAI04446.1| 197|Homo sapiens transmembrane protein 58
protein.
Length = 197
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 467 PPPQIRYNPPHGPPMVYPVYHGTPPTY 547
P P Y PP GP YP+Y PP Y
Sbjct: 154 PQPGFMY-PPSGPAPQYPLYPAGPPVY 179
>AY358589-1|AAQ88952.1| 197|Homo sapiens PPAG583 protein.
Length = 197
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 467 PPPQIRYNPPHGPPMVYPVYHGTPPTY 547
P P Y PP GP YP+Y PP Y
Sbjct: 154 PQPGFMY-PPSGPAPQYPLYPAGPPVY 179
>AL137724-1|CAB70894.1| 439|Homo sapiens hypothetical protein
protein.
Length = 439
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 467 PPPQIRYNPPHGPPMVYPVYHGTPPTY 547
PPPQ + PPH PP P H PP +
Sbjct: 45 PPPQ--HQPPHQPPHQPPPQHQPPPQH 69
>AC078834-1|AAS01989.1| 439|Homo sapiens unknown protein.
Length = 439
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 467 PPPQIRYNPPHGPPMVYPVYHGTPPTY 547
PPPQ + PPH PP P H PP +
Sbjct: 45 PPPQ--HQPPHQPPHQPPPQHQPPPQH 69
>X17568-1|CAB57868.1| 240|Homo sapiens snRNP B' protein protein.
Length = 240
Score = 30.3 bits (65), Expect = 7.0
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +2
Query: 467 PPPQIRYNPPHGPPMVYPVYHGTP 538
PPP +R PP GPPM P GTP
Sbjct: 191 PPPGMR--PPMGPPMGIPPGRGTP 212
>X17567-1|CAB57867.1| 231|Homo sapiens snRNP B protein protein.
Length = 231
Score = 30.3 bits (65), Expect = 7.0
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +2
Query: 467 PPPQIRYNPPHGPPMVYPVYHGTP 538
PPP +R PP GPPM P GTP
Sbjct: 191 PPPGMR--PPMGPPMGIPPGRGTP 212
>X15893-1|CAA33902.1| 231|Homo sapiens protein ( Human B cod gene
for B/B' snRNP associated protein. ).
Length = 231
Score = 30.3 bits (65), Expect = 7.0
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +2
Query: 467 PPPQIRYNPPHGPPMVYPVYHGTP 538
PPP +R PP GPPM P GTP
Sbjct: 191 PPPGMR--PPMGPPMGIPPGRGTP 212
>M34082-1|AAA36579.1| 233|Homo sapiens protein ( Human small
nuclear ribonucleoprotein particle SmB' mRNA, 3' end. ).
Length = 233
Score = 30.3 bits (65), Expect = 7.0
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +2
Query: 467 PPPQIRYNPPHGPPMVYPVYHGTP 538
PPP +R PP GPPM P GTP
Sbjct: 184 PPPGMR--PPMGPPMGIPPGRGTP 205
>M34081-1|AAA36578.1| 224|Homo sapiens protein ( Human small
nuclear ribonucleoprotein particle SmB mRNA, 3' end. ).
Length = 224
Score = 30.3 bits (65), Expect = 7.0
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +2
Query: 467 PPPQIRYNPPHGPPMVYPVYHGTP 538
PPP +R PP GPPM P GTP
Sbjct: 184 PPPGMR--PPMGPPMGIPPGRGTP 205
>L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein
protein.
Length = 424
Score = 30.3 bits (65), Expect = 7.0
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = +2
Query: 356 MSGHGNTGSSH---GYPSSGGQSYPKXXXXXXXXXXXXXSPPPQIRYNPPHGPPMVYPVY 526
++ HG G H G P SGGQ P+ PPP PP GPP P+
Sbjct: 311 LAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHP-----GPPPMGM--PPRGPPFGSPMG 363
Query: 527 HGTP 538
H P
Sbjct: 364 HPGP 367
>L19605-1|AAA19734.1| 505|Homo sapiens 56K autoantigen protein.
Length = 505
Score = 30.3 bits (65), Expect = 7.0
Identities = 23/70 (32%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Frame = +2
Query: 347 SGGMSG-HGNTGSSHGYPSSGGQSYPKXXXXXXXXXXXXXSP-PPQIRYNPPHG-PPM-- 511
+ MSG G + YP + G YP P PP Y PP G PP
Sbjct: 58 AANMSGTFGGANMPNLYPGAPGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRM 117
Query: 512 -VYPVYHGTP 538
YP Y G P
Sbjct: 118 PSYPPYPGAP 127
>CR456969-1|CAG33250.1| 240|Homo sapiens SNRPB protein.
Length = 240
Score = 30.3 bits (65), Expect = 7.0
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +2
Query: 467 PPPQIRYNPPHGPPMVYPVYHGTP 538
PPP +R PP GPPM P GTP
Sbjct: 191 PPPGMR--PPMGPPMGIPPGRGTP 212
>CR450323-1|CAG29319.1| 505|Homo sapiens ANXA11 protein.
Length = 505
Score = 30.3 bits (65), Expect = 7.0
Identities = 23/70 (32%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Frame = +2
Query: 347 SGGMSG-HGNTGSSHGYPSSGGQSYPKXXXXXXXXXXXXXSP-PPQIRYNPPHG-PPM-- 511
+ MSG G + YP + G YP P PP Y PP G PP
Sbjct: 58 AANMSGTFGGANMPNLYPGAPGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRM 117
Query: 512 -VYPVYHGTP 538
YP Y G P
Sbjct: 118 PSYPPYPGAP 127
>BT019934-1|AAV38737.1| 505|Homo sapiens annexin A11 protein.
Length = 505
Score = 30.3 bits (65), Expect = 7.0
Identities = 23/70 (32%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Frame = +2
Query: 347 SGGMSG-HGNTGSSHGYPSSGGQSYPKXXXXXXXXXXXXXSP-PPQIRYNPPHG-PPM-- 511
+ MSG G + YP + G YP P PP Y PP G PP
Sbjct: 58 AANMSGTFGGANMPNLYPGAPGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRM 117
Query: 512 -VYPVYHGTP 538
YP Y G P
Sbjct: 118 PSYPPYPGAP 127
>BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.3 bits (65), Expect = 7.0
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = +2
Query: 356 MSGHGNTGSSH---GYPSSGGQSYPKXXXXXXXXXXXXXSPPPQIRYNPPHGPPMVYPVY 526
++ HG G H G P SGGQ P+ PPP PP GPP P+
Sbjct: 311 LAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHP-----GPPPMGM--PPRGPPFGSPMG 363
Query: 527 HGTP 538
H P
Sbjct: 364 HPGP 367
>BC080516-1|AAH80516.1| 231|Homo sapiens small nuclear
ribonucleoprotein polypeptides B and B1 protein.
Length = 231
Score = 30.3 bits (65), Expect = 7.0
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +2
Query: 467 PPPQIRYNPPHGPPMVYPVYHGTP 538
PPP +R PP GPPM P GTP
Sbjct: 191 PPPGMR--PPMGPPMGIPPGRGTP 212
>BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.3 bits (65), Expect = 7.0
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = +2
Query: 356 MSGHGNTGSSH---GYPSSGGQSYPKXXXXXXXXXXXXXSPPPQIRYNPPHGPPMVYPVY 526
++ HG G H G P SGGQ P+ PPP PP GPP P+
Sbjct: 311 LAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHP-----GPPPMGM--PPRGPPFGSPMG 363
Query: 527 HGTP 538
H P
Sbjct: 364 HPGP 367
>BC007564-1|AAH07564.1| 505|Homo sapiens annexin A11 protein.
Length = 505
Score = 30.3 bits (65), Expect = 7.0
Identities = 23/70 (32%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Frame = +2
Query: 347 SGGMSG-HGNTGSSHGYPSSGGQSYPKXXXXXXXXXXXXXSP-PPQIRYNPPHG-PPM-- 511
+ MSG G + YP + G YP P PP Y PP G PP
Sbjct: 58 AANMSGTFGGANMPNLYPGAPGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRM 117
Query: 512 -VYPVYHGTP 538
YP Y G P
Sbjct: 118 PSYPPYPGAP 127
>BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.3 bits (65), Expect = 7.0
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = +2
Query: 356 MSGHGNTGSSH---GYPSSGGQSYPKXXXXXXXXXXXXXSPPPQIRYNPPHGPPMVYPVY 526
++ HG G H G P SGGQ P+ PPP PP GPP P+
Sbjct: 311 LAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHP-----GPPPMGM--PPRGPPFGSPMG 363
Query: 527 HGTP 538
H P
Sbjct: 364 HPGP 367
>BC003530-1|AAH03530.1| 234|Homo sapiens SNRPB protein protein.
Length = 234
Score = 30.3 bits (65), Expect = 7.0
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +2
Query: 467 PPPQIRYNPPHGPPMVYPVYHGTP 538
PPP +R PP GPPM P GTP
Sbjct: 191 PPPGMR--PPMGPPMGIPPGRGTP 212
>AY742712-1|AAU89981.1| 231|Homo sapiens small nuclear
ribonucleoprotein polypeptide B protein.
Length = 231
Score = 30.3 bits (65), Expect = 7.0
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +2
Query: 467 PPPQIRYNPPHGPPMVYPVYHGTP 538
PPP +R PP GPPM P GTP
Sbjct: 191 PPPGMR--PPMGPPMGIPPGRGTP 212
>AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.3 bits (65), Expect = 7.0
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = +2
Query: 356 MSGHGNTGSSH---GYPSSGGQSYPKXXXXXXXXXXXXXSPPPQIRYNPPHGPPMVYPVY 526
++ HG G H G P SGGQ P+ PPP PP GPP P+
Sbjct: 311 LAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHP-----GPPPMGM--PPRGPPFGSPMG 363
Query: 527 HGTP 538
H P
Sbjct: 364 HPGP 367
>AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.3 bits (65), Expect = 7.0
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = +2
Query: 356 MSGHGNTGSSH---GYPSSGGQSYPKXXXXXXXXXXXXXSPPPQIRYNPPHGPPMVYPVY 526
++ HG G H G P SGGQ P+ PPP PP GPP P+
Sbjct: 311 LAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHP-----GPPPMGM--PPRGPPFGSPMG 363
Query: 527 HGTP 538
H P
Sbjct: 364 HPGP 367
>AL513174-3|CAI13917.1| 204|Homo sapiens annexin A11 protein.
Length = 204
Score = 30.3 bits (65), Expect = 7.0
Identities = 23/70 (32%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Frame = +2
Query: 347 SGGMSG-HGNTGSSHGYPSSGGQSYPKXXXXXXXXXXXXXSP-PPQIRYNPPHG-PPM-- 511
+ MSG G + YP + G YP P PP Y PP G PP
Sbjct: 58 AANMSGTFGGANMPNLYPGAPGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRM 117
Query: 512 -VYPVYHGTP 538
YP Y G P
Sbjct: 118 PSYPPYPGAP 127
>AL513174-2|CAI13916.1| 505|Homo sapiens annexin A11 protein.
Length = 505
Score = 30.3 bits (65), Expect = 7.0
Identities = 23/70 (32%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Frame = +2
Query: 347 SGGMSG-HGNTGSSHGYPSSGGQSYPKXXXXXXXXXXXXXSP-PPQIRYNPPHG-PPM-- 511
+ MSG G + YP + G YP P PP Y PP G PP
Sbjct: 58 AANMSGTFGGANMPNLYPGAPGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRM 117
Query: 512 -VYPVYHGTP 538
YP Y G P
Sbjct: 118 PSYPPYPGAP 127
>AL513174-1|CAI13915.1| 150|Homo sapiens annexin A11 protein.
Length = 150
Score = 30.3 bits (65), Expect = 7.0
Identities = 23/70 (32%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Frame = +2
Query: 347 SGGMSG-HGNTGSSHGYPSSGGQSYPKXXXXXXXXXXXXXSP-PPQIRYNPPHG-PPM-- 511
+ MSG G + YP + G YP P PP Y PP G PP
Sbjct: 58 AANMSGTFGGANMPNLYPGAPGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRM 117
Query: 512 -VYPVYHGTP 538
YP Y G P
Sbjct: 118 PSYPPYPGAP 127
>AL356095-2|CAI40438.1| 204|Homo sapiens annexin A11 protein.
Length = 204
Score = 30.3 bits (65), Expect = 7.0
Identities = 23/70 (32%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Frame = +2
Query: 347 SGGMSG-HGNTGSSHGYPSSGGQSYPKXXXXXXXXXXXXXSP-PPQIRYNPPHG-PPM-- 511
+ MSG G + YP + G YP P PP Y PP G PP
Sbjct: 58 AANMSGTFGGANMPNLYPGAPGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRM 117
Query: 512 -VYPVYHGTP 538
YP Y G P
Sbjct: 118 PSYPPYPGAP 127
>AL356095-1|CAI40437.1| 505|Homo sapiens annexin A11 protein.
Length = 505
Score = 30.3 bits (65), Expect = 7.0
Identities = 23/70 (32%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Frame = +2
Query: 347 SGGMSG-HGNTGSSHGYPSSGGQSYPKXXXXXXXXXXXXXSP-PPQIRYNPPHG-PPM-- 511
+ MSG G + YP + G YP P PP Y PP G PP
Sbjct: 58 AANMSGTFGGANMPNLYPGAPGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRM 117
Query: 512 -VYPVYHGTP 538
YP Y G P
Sbjct: 118 PSYPPYPGAP 127
>AL355987-6|CAI12681.1| 401|Homo sapiens KIAA1984 protein.
Length = 401
Score = 30.3 bits (65), Expect = 7.0
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 318 TQEVVTATRLQEACPVMAIQGVATVIRLQEDRAT 419
TQE+ T T+LQE C + IQGV + +++AT
Sbjct: 25 TQELKTITQLQEQCRALQIQGVKE--NMDQNKAT 56
>AL049650-8|CAB46715.1| 240|Homo sapiens small nuclear
ribonucleoprotein polypeptides B and B1 protein.
Length = 240
Score = 30.3 bits (65), Expect = 7.0
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +2
Query: 467 PPPQIRYNPPHGPPMVYPVYHGTP 538
PPP +R PP GPPM P GTP
Sbjct: 191 PPPGMR--PPMGPPMGIPPGRGTP 212
>AL049650-7|CAB46714.1| 231|Homo sapiens small nuclear
ribonucleoprotein polypeptides B and B1 protein.
Length = 231
Score = 30.3 bits (65), Expect = 7.0
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +2
Query: 467 PPPQIRYNPPHGPPMVYPVYHGTP 538
PPP +R PP GPPM P GTP
Sbjct: 191 PPPGMR--PPMGPPMGIPPGRGTP 212
>AL031665-7|CAI21758.2| 154|Homo sapiens chromosome 20 open reading
frame 46 protein.
Length = 154
Score = 30.3 bits (65), Expect = 7.0
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 421 KNDSYYNNTQPLSLQSPATNKIQSAPRPTNGLPSLPRNPSD 543
+N + + Q+P ++ S+P P G+ SLPR+ D
Sbjct: 60 ENACFSSEEHETHFQNPGNTRLGSSPSPPGGVSSLPRSQRD 100
>AL031665-6|CAC16505.1| 256|Homo sapiens chromosome 20 open reading
frame 46 protein.
Length = 256
Score = 30.3 bits (65), Expect = 7.0
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 421 KNDSYYNNTQPLSLQSPATNKIQSAPRPTNGLPSLPRNPSD 543
+N + + Q+P ++ S+P P G+ SLPR+ D
Sbjct: 60 ENACFSSEEHETHFQNPGNTRLGSSPSPPGGVSSLPRSQRD 100
>AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b,
subunit 4 variant protein.
Length = 424
Score = 30.3 bits (65), Expect = 7.0
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = +2
Query: 356 MSGHGNTGSSH---GYPSSGGQSYPKXXXXXXXXXXXXXSPPPQIRYNPPHGPPMVYPVY 526
++ HG G H G P SGGQ P+ PPP PP GPP P+
Sbjct: 311 LAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHP-----GPPPMGM--PPRGPPFGSPMG 363
Query: 527 HGTP 538
H P
Sbjct: 364 HPGP 367
>AK222918-1|BAD96638.1| 505|Homo sapiens annexin A11 variant
protein.
Length = 505
Score = 30.3 bits (65), Expect = 7.0
Identities = 23/70 (32%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Frame = +2
Query: 347 SGGMSG-HGNTGSSHGYPSSGGQSYPKXXXXXXXXXXXXXSP-PPQIRYNPPHG-PPM-- 511
+ MSG G + YP + G YP P PP Y PP G PP
Sbjct: 58 AANMSGTFGGANMPNLYPGAPGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRM 117
Query: 512 -VYPVYHGTP 538
YP Y G P
Sbjct: 118 PSYPPYPGAP 127
>AK002052-1|BAA92058.1| 256|Homo sapiens protein ( Homo sapiens
cDNA FLJ11190 fis, clone PLACE1007583. ).
Length = 256
Score = 30.3 bits (65), Expect = 7.0
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 421 KNDSYYNNTQPLSLQSPATNKIQSAPRPTNGLPSLPRNPSD 543
+N + + Q+P ++ S+P P G+ SLPR+ D
Sbjct: 60 ENACFSSEEHETHFQNPGNTRLGSSPSPPGGVSSLPRSQRD 100
>AJ278465-1|CAB94997.1| 505|Homo sapiens annexin A11 protein.
Length = 505
Score = 30.3 bits (65), Expect = 7.0
Identities = 23/70 (32%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Frame = +2
Query: 347 SGGMSG-HGNTGSSHGYPSSGGQSYPKXXXXXXXXXXXXXSP-PPQIRYNPPHG-PPM-- 511
+ MSG G + YP + G YP P PP Y PP G PP
Sbjct: 58 AANMSGTFGGANMPNLYPGAPGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRM 117
Query: 512 -VYPVYHGTP 538
YP Y G P
Sbjct: 118 PSYPPYPGAP 127
>AJ278464-1|CAB94996.1| 505|Homo sapiens annexin A11 protein.
Length = 505
Score = 30.3 bits (65), Expect = 7.0
Identities = 23/70 (32%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Frame = +2
Query: 347 SGGMSG-HGNTGSSHGYPSSGGQSYPKXXXXXXXXXXXXXSP-PPQIRYNPPHG-PPM-- 511
+ MSG G + YP + G YP P PP Y PP G PP
Sbjct: 58 AANMSGTFGGANMPNLYPGAPGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRM 117
Query: 512 -VYPVYHGTP 538
YP Y G P
Sbjct: 118 PSYPPYPGAP 127
>AJ278463-1|CAB94995.1| 505|Homo sapiens annexin A11 protein.
Length = 505
Score = 30.3 bits (65), Expect = 7.0
Identities = 23/70 (32%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Frame = +2
Query: 347 SGGMSG-HGNTGSSHGYPSSGGQSYPKXXXXXXXXXXXXXSP-PPQIRYNPPHG-PPM-- 511
+ MSG G + YP + G YP P PP Y PP G PP
Sbjct: 58 AANMSGTFGGANMPNLYPGAPGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRM 117
Query: 512 -VYPVYHGTP 538
YP Y G P
Sbjct: 118 PSYPPYPGAP 127
>AB209770-1|BAD93007.1| 510|Homo sapiens annexin A11 variant
protein.
Length = 510
Score = 30.3 bits (65), Expect = 7.0
Identities = 23/70 (32%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Frame = +2
Query: 347 SGGMSG-HGNTGSSHGYPSSGGQSYPKXXXXXXXXXXXXXSP-PPQIRYNPPHG-PPM-- 511
+ MSG G + YP + G YP P PP Y PP G PP
Sbjct: 63 AANMSGTFGGANMPNLYPGAPGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRM 122
Query: 512 -VYPVYHGTP 538
YP Y G P
Sbjct: 123 PSYPPYPGAP 132
>DQ109556-1|AAZ99795.1| 911|Homo sapiens adaptor protein HOFI
protein.
Length = 911
Score = 29.9 bits (64), Expect = 9.2
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +1
Query: 478 NKIQSAPRPTNGLPSLPRNPSDLRLPGAKLWKQIRNAFSRISAFESRRAGW 630
N A P+ LP P D LP +K WK ++ + S+ S AG+
Sbjct: 458 NTGSEATGPSRPLPDAPHGVMDSGLPWSKDWKGSKDVLRKASSDMSASAGY 508
>BC111855-1|AAI11856.1| 197|Homo sapiens transmembrane protein 58
protein.
Length = 197
Score = 29.9 bits (64), Expect = 9.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 470 PPQIRY-NPPHGPPMVYPVYHGTPPTY 547
PPQ + PP GP YP+Y PP Y
Sbjct: 153 PPQPGFIYPPSGPAPQYPLYPAGPPVY 179
>BC104444-1|AAI04445.1| 197|Homo sapiens transmembrane protein 58
protein.
Length = 197
Score = 29.9 bits (64), Expect = 9.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 470 PPQIRY-NPPHGPPMVYPVYHGTPPTY 547
PPQ + PP GP YP+Y PP Y
Sbjct: 153 PPQPGFIYPPSGPAPQYPLYPAGPPVY 179
>BC061908-1|AAH61908.1| 176|Homo sapiens TMEM58 protein protein.
Length = 176
Score = 29.9 bits (64), Expect = 9.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 470 PPQIRY-NPPHGPPMVYPVYHGTPPTY 547
PPQ + PP GP YP+Y PP Y
Sbjct: 132 PPQPGFIYPPSGPAPQYPLYPAGPPVY 158
>BC009558-1|AAH09558.1| 228|Homo sapiens TMEM58 protein protein.
Length = 228
Score = 29.9 bits (64), Expect = 9.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 470 PPQIRY-NPPHGPPMVYPVYHGTPPTY 547
PPQ + PP GP YP+Y PP Y
Sbjct: 184 PPQPGFIYPPSGPAPQYPLYPAGPPVY 210
>AL513217-1|CAH72277.1| 197|Homo sapiens transmembrane protein 58
protein.
Length = 197
Score = 29.9 bits (64), Expect = 9.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 470 PPQIRY-NPPHGPPMVYPVYHGTPPTY 547
PPQ + PP GP YP+Y PP Y
Sbjct: 153 PPQPGFIYPPSGPAPQYPLYPAGPPVY 179
>AK001267-1|BAA91590.1| 639|Homo sapiens protein ( Homo sapiens
cDNA FLJ10405 fis, clone NT2RM4000496, weakly similar to
SAP1 PROTEIN. ).
Length = 639
Score = 29.9 bits (64), Expect = 9.2
Identities = 23/68 (33%), Positives = 27/68 (39%)
Frame = +2
Query: 353 GMSGHGNTGSSHGYPSSGGQSYPKXXXXXXXXXXXXXSPPPQIRYNPPHGPPMVYPVYHG 532
G +G N SS+ YPS+ SYP PPP P G P P+
Sbjct: 115 GYNGTSNL-SSYSYPSA---SYPPQTAVGSGYSPGGAPPPPSAYL--PSGIPAPTPLPPT 168
Query: 533 TPPTYVYQ 556
T P Y YQ
Sbjct: 169 TVPGYTYQ 176
>AC093727-1|AAX81992.1| 639|Homo sapiens unknown protein.
Length = 639
Score = 29.9 bits (64), Expect = 9.2
Identities = 23/68 (33%), Positives = 27/68 (39%)
Frame = +2
Query: 353 GMSGHGNTGSSHGYPSSGGQSYPKXXXXXXXXXXXXXSPPPQIRYNPPHGPPMVYPVYHG 532
G +G N SS+ YPS+ SYP PPP P G P P+
Sbjct: 115 GYNGTSNL-SSYSYPSA---SYPPQTAVGSGYSPGGAPPPPSAYL--PSGIPAPTPLPPT 168
Query: 533 TPPTYVYQ 556
T P Y YQ
Sbjct: 169 TVPGYTYQ 176
>AC005483-1|AAC83404.2| 484|Homo sapiens unknown protein.
Length = 484
Score = 29.9 bits (64), Expect = 9.2
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = +1
Query: 439 NNTQPLSLQSPATNKIQSAPRPTNGLPSLPRNPSDLRLPGAKLWKQIRNAFSRISAFESR 618
N QP Q ++ + + P +GLPS P+ L+L L Q A + +S+ S
Sbjct: 88 NQNQPSPTQQSSSPPQKPSQSPGHGLPSPLTPPNPLQLVNNPLASQAAAAAAAMSSIASS 147
Query: 619 RAGWNGL 639
+A N L
Sbjct: 148 QAFGNAL 154
>AB037716-1|BAA92533.1| 550|Homo sapiens KIAA1295 protein protein.
Length = 550
Score = 29.9 bits (64), Expect = 9.2
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +1
Query: 478 NKIQSAPRPTNGLPSLPRNPSDLRLPGAKLWKQIRNAFSRISAFESRRAGW 630
N A P+ LP P D LP +K WK ++ + S+ S AG+
Sbjct: 97 NTGSEATGPSRPLPDAPHGVMDSGLPWSKDWKGSKDVLRKASSDMSASAGY 147
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,599,703
Number of Sequences: 237096
Number of extensions: 2199256
Number of successful extensions: 8299
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 6910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8248
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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