Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25b01
         (702 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              24   1.6  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   3.7  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    22   6.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.5  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    22   6.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   6.5  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   8.6  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   8.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   8.6  

>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = +3

Query: 159 ADIRIQSPEDFLVTADCQGRADTDIHLLAAYLVMATLEVATATRLL 296
           A+I +   E   +  +C   +D DIHL ++ L+    +  T   ++
Sbjct: 88  AEIYLDENEVNKLITECSAISDADIHLKSSKLIKCFAKYKTLKEIM 133


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 14/42 (33%), Positives = 16/42 (38%)
 Frame = +2

Query: 395 PSSGGQSYPKXXXXXXXXXXXXXSPPPQIRYNPPHGPPMVYP 520
           PSSG    P+             SPP   +  PP GPP   P
Sbjct: 16  PSSGAPG-PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56



 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 448 QPLSLQSPATNKIQSAPRPTNGLP 519
           QP   QSP   +  S P P+ G P
Sbjct: 24  QPSPHQSPQAPQRGSPPNPSQGPP 47


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +1

Query: 397 VFRRTELPKNDSYYNNTQPLSLQSPATNKIQSAPR 501
           VF   E  K D+YY N      + PA     SA R
Sbjct: 420 VFHVQETDKYDAYYGNRFSGEYEIPAHGLPPSATR 454


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -2

Query: 419 GSSVLLKTDNRGYSLYCHDRTCL 351
           GS+VLL +D     LYC  R  L
Sbjct: 672 GSAVLLISDRLSRDLYCGIRAGL 694


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -2

Query: 419 GSSVLLKTDNRGYSLYCHDRTCL 351
           GS+VLL +D     LYC  R  L
Sbjct: 710 GSAVLLISDRLSRDLYCGIRAGL 732


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/24 (33%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +2

Query: 11  ASAHCSRRLCVINKHTF-TMFSKR 79
           A  HC + +C+  K +F  ++ KR
Sbjct: 70  AGGHCEKGVCICRKTSFKDLWDKR 93


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +1

Query: 229 ISIFWRPIWSW 261
           +S+FW   W W
Sbjct: 165 LSVFWGSAWQW 175



 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/15 (46%), Positives = 7/15 (46%)
 Frame = +1

Query: 283 LPVFWRLVWSW*HRR 327
           L VFW   W W   R
Sbjct: 165 LSVFWGSAWQWNEER 179


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +1

Query: 46  KQTHFHNVFKTLCVIATYCDFVYY*CTK 129
           K T  HN F+    +   CD ++   TK
Sbjct: 199 KPTRDHNAFEYAMAVMKMCDILHLRHTK 226


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 516 TQFTTEPLRPTFTRRKTLEANTE 584
           +QF  +  R T+TR +TLE   E
Sbjct: 266 SQFERKRGRQTYTRYQTLELEKE 288


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 259 WQHWK*PRL 285
           W+HWK P L
Sbjct: 862 WRHWKFPNL 870


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,156
Number of Sequences: 438
Number of extensions: 4356
Number of successful extensions: 23
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)