BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25a15
(722 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011481-1|AAH11481.1| 112|Homo sapiens Unknown (protein for IM... 34 0.45
Z48481-1|CAA88372.1| 582|Homo sapiens membrane-type matrix meta... 31 3.2
X90925-1|CAA62432.1| 582|Homo sapiens MT-MMP protein protein. 31 3.2
X83535-1|CAA58519.1| 582|Homo sapiens MT-MMP protein. 31 3.2
U41078-1|AAA83770.1| 582|Homo sapiens membrane-type matrix meta... 31 3.2
BC064803-1|AAH64803.1| 582|Homo sapiens matrix metallopeptidase... 31 3.2
AY795074-1|AAV40837.1| 582|Homo sapiens matrix metalloproteinas... 31 3.2
U08854-1|AAC50077.1| 530|Homo sapiens UDP glucuronosyltransfera... 30 9.6
D26512-1|BAA05519.1| 582|Homo sapiens membrane-type matrix meta... 30 9.6
AF548389-1|AAN40695.1| 530|Homo sapiens UDP-glucuronosyltransfe... 30 9.6
AF180322-1|AAD55093.1| 530|Homo sapiens UDP-glucuronosyltransfe... 30 9.6
AF179404-1|AAF25010.1| 135|Homo sapiens UDP-glucuronosyltransfe... 30 9.6
>BC011481-1|AAH11481.1| 112|Homo sapiens Unknown (protein for
IMAGE:4151212) protein.
Length = 112
Score = 34.3 bits (75), Expect = 0.45
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -2
Query: 577 PRRLPCQSFPPNRSQARFGLRAQDRTGGQTPTHNRQTLPRQLNQTSGCW 431
P+R+P Q P + AR G RA R P H +P + + + W
Sbjct: 36 PQRIPAQRLVPQQPHARRGCRAGQRPVAAAPAHGAHVIPAEGHGPAAEW 84
>Z48481-1|CAA88372.1| 582|Homo sapiens membrane-type matrix
metalloproteinase 1 protein.
Length = 582
Score = 31.5 bits (68), Expect = 3.2
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1
Query: 580 RHPVHHPNIWRNNFDDTKANLMTEMRLYKEFKFW 681
++P + PNI NFD T A L EM ++KE FW
Sbjct: 310 KNPTYGPNICDGNFD-TVAMLRGEMFVFKERWFW 342
>X90925-1|CAA62432.1| 582|Homo sapiens MT-MMP protein protein.
Length = 582
Score = 31.5 bits (68), Expect = 3.2
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1
Query: 580 RHPVHHPNIWRNNFDDTKANLMTEMRLYKEFKFW 681
++P + PNI NFD T A L EM ++KE FW
Sbjct: 310 KNPTYGPNICDGNFD-TVAMLRGEMFVFKERWFW 342
>X83535-1|CAA58519.1| 582|Homo sapiens MT-MMP protein.
Length = 582
Score = 31.5 bits (68), Expect = 3.2
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1
Query: 580 RHPVHHPNIWRNNFDDTKANLMTEMRLYKEFKFW 681
++P + PNI NFD T A L EM ++KE FW
Sbjct: 310 KNPTYGPNICDGNFD-TVAMLRGEMFVFKERWFW 342
>U41078-1|AAA83770.1| 582|Homo sapiens membrane-type matrix
metalloproteinase-1 protein.
Length = 582
Score = 31.5 bits (68), Expect = 3.2
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1
Query: 580 RHPVHHPNIWRNNFDDTKANLMTEMRLYKEFKFW 681
++P + PNI NFD T A L EM ++KE FW
Sbjct: 310 KNPTYGPNICDGNFD-TVAMLRGEMFVFKERWFW 342
>BC064803-1|AAH64803.1| 582|Homo sapiens matrix metallopeptidase 14
(membrane-inserted) protein.
Length = 582
Score = 31.5 bits (68), Expect = 3.2
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1
Query: 580 RHPVHHPNIWRNNFDDTKANLMTEMRLYKEFKFW 681
++P + PNI NFD T A L EM ++KE FW
Sbjct: 310 KNPTYGPNICDGNFD-TVAMLRGEMFVFKERWFW 342
>AY795074-1|AAV40837.1| 582|Homo sapiens matrix metalloproteinase
14 (membrane-inserted) protein.
Length = 582
Score = 31.5 bits (68), Expect = 3.2
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1
Query: 580 RHPVHHPNIWRNNFDDTKANLMTEMRLYKEFKFW 681
++P + PNI NFD T A L EM ++KE FW
Sbjct: 310 KNPTYGPNICDGNFD-TVAMLRGEMFVFKERWFW 342
>U08854-1|AAC50077.1| 530|Homo sapiens UDP glucuronosyltransferase
precursor protein.
Length = 530
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +1
Query: 43 KMTILCWLALLSTLTAVNAVNILAVFPTPAYSHHIVYKVYIEALAEKCHNVTVV 204
K T + L LS + + + V+PT YSH I K +E L ++ H VTV+
Sbjct: 4 KWTSVFLLIQLSCYFSSGSCGKVLVWPTE-YSHWINMKTILEELVQRGHEVTVL 56
>D26512-1|BAA05519.1| 582|Homo sapiens membrane-type matrix
metalloproteinase protein.
Length = 582
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 580 RHPVHHPNIWRNNFDDTKANLMTEMRLYKEFKFW 681
++P + PNI NF DT A L EM ++K+ FW
Sbjct: 310 KNPTYGPNICDGNF-DTVAMLRGEMFVFKKRWFW 342
>AF548389-1|AAN40695.1| 530|Homo sapiens
UDP-glucuronosyltransferase protein.
Length = 530
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +1
Query: 43 KMTILCWLALLSTLTAVNAVNILAVFPTPAYSHHIVYKVYIEALAEKCHNVTVV 204
K T + L LS + + + V+PT YSH I K +E L ++ H VTV+
Sbjct: 4 KWTSVFLLIQLSCYFSSGSCGKVLVWPTE-YSHWINMKTILEELVQRGHEVTVL 56
>AF180322-1|AAD55093.1| 530|Homo sapiens
UDP-glucuronosyltransferase 2B15 protein.
Length = 530
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +1
Query: 43 KMTILCWLALLSTLTAVNAVNILAVFPTPAYSHHIVYKVYIEALAEKCHNVTVV 204
K T + L LS + + + V+PT YSH I K +E L ++ H VTV+
Sbjct: 4 KWTSVFLLIQLSCYFSSGSCGKVLVWPTE-YSHWINMKTILEELVQRGHEVTVL 56
>AF179404-1|AAF25010.1| 135|Homo sapiens
UDP-glucuronosyltransferase UGT2B15 protein.
Length = 135
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +1
Query: 43 KMTILCWLALLSTLTAVNAVNILAVFPTPAYSHHIVYKVYIEALAEKCHNVTVV 204
K T + L LS + + + V+PT YSH I K +E L ++ H VTV+
Sbjct: 4 KWTSVFLLIQLSCYFSSGSCGKVLVWPTE-YSHWINMKTILEELVQRGHEVTVL 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,256,030
Number of Sequences: 237096
Number of extensions: 2411192
Number of successful extensions: 4364
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4358
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -