Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25a08
(658 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 37 5e-04
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 36 9e-04
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 34 0.003
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 31 0.042
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 30 0.056
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 29 0.13
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 29 0.13
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 28 0.23
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 28 0.30
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr... 27 0.69
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 25 2.8
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 24 4.9
AF364130-1|AAL35506.1| 417|Anopheles gambiae putative odorant r... 24 4.9
AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox prote... 23 6.4
Z22930-5|CAA80517.1| 275|Anopheles gambiae trypsin protein. 23 8.5
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 23 8.5
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 37.1 bits (82), Expect = 5e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -1
Query: 382 APFEHVQEGTNRVLEQYPSAEVVALGDFNAHHQEWLGSRTTD 257
A FE E LE + +VV GDFNA H+EW RT D
Sbjct: 110 AEFERFLEAIE--LEGFSHPQVVVAGDFNARHEEWGSPRTCD 149
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 36.3 bits (80), Expect = 9e-04
Identities = 21/47 (44%), Positives = 24/47 (51%)
Frame = -1
Query: 343 LEQYPSAEVVALGDFNAHHQEWLGSRTTDLPGRTAYDLALAHGLSQL 203
LE + VV GDFNA H EW GSR +L G + GLS L
Sbjct: 110 LEASSHSHVVIAGDFNAWHTEW-GSRRNNLRGEELLQMVEVLGLSIL 155
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 34.3 bits (75), Expect = 0.003
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = -1
Query: 343 LEQYPSAEVVALGDFNAHHQEWLGSRTTDLPGRTAYDLALAHGL 212
LE +VV GDFNA H+EW GSR ++ G + + GL
Sbjct: 167 LEAQSHPQVVVAGDFNAWHEEW-GSRRSNERGEVLLEASQQLGL 209
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 30.7 bits (66), Expect = 0.042
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 343 LEQYPSAEVVALGDFNAHHQEWLGSRTTD 257
LE ++VV GDFNA H EW R ++
Sbjct: 111 LETLTHSQVVIAGDFNAWHVEWGSERNSE 139
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 30.3 bits (65), Expect = 0.056
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 343 LEQYPSAEVVALGDFNAHHQEWLGSR 266
LE + VV GDFNA H+EW R
Sbjct: 173 LEAASHSRVVVAGDFNAWHEEWGSGR 198
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 29.1 bits (62), Expect = 0.13
Identities = 33/131 (25%), Positives = 50/131 (38%)
Frame = -1
Query: 400 SSDAGSAPFEHVQEGTNRVLEQYPSAEVVALGDFNAHHQEWLGSRTTDLPGRTAYDLALA 221
S G F + E + ++ + V+ GDFNA H +W SRT G LA
Sbjct: 92 SPQTGVPEFRSIMEKIDLIVRG--CSRVLLAGDFNAMHLDWGSSRTCP-KGLELLQLADN 148
Query: 220 HGLSQLVTQPTRVPDIEGHEPSXXXXXXXXDPAGYSAVVDAPLGSSDHRPTRAAVPLSRP 41
GL L+ + +P +G+ +++ V + L D V P
Sbjct: 149 LGL-VLLNKADCLPTFKGNRADTNRFPPSRPDVTFASSVISRLDPRDDSARGWRV----P 203
Query: 40 DRRTTTGHRRV 8
D T + HR V
Sbjct: 204 DVATLSDHRYV 214
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 29.1 bits (62), Expect = 0.13
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 343 LEQYPSAEVVALGDFNAHHQEWLGSRTT 260
LE ++VV GDFNA H EW +R +
Sbjct: 130 LEASTHSQVVIDGDFNAWHTEWGSARNS 157
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 28.3 bits (60), Expect = 0.23
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 373 EHVQEGTNRVLEQ-YPSAEVVALGDFNAHHQEWLGSRTTDLPGRTAYD 233
E +E R+ ++ Y ++ GDFNA EW GS++T+ G +
Sbjct: 96 EKFEEMLKRISDEVYDVNPIIISGDFNAWATEW-GSKSTNARGNAVLE 142
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 27.9 bits (59), Expect = 0.30
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 382 APFEHVQEGTNRVLEQYPSAEVVALGDFNAHHQEWLGSRT 263
A FE + +P+ VV GDFNA H+ W +RT
Sbjct: 97 AEFEEFLNAVEIEVSAHPN--VVLGGDFNAWHEAWGSART 134
>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
protein.
Length = 1253
Score = 26.6 bits (56), Expect = 0.69
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 5 PDSSMPGRRSTIGTREWNGSTGGAVIRRSKRS 100
PD PG++ + G+R +NG GG R + S
Sbjct: 1150 PDEP-PGQQPSPGSRSYNGQMGGGGANRKRSS 1180
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 24.6 bits (51), Expect = 2.8
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1
Query: 352 NRVLEQYPSAEVVALGDFNAHHQEWLGSRTTDLPG 248
N V E +V GDFNA EW GS+ T+ G
Sbjct: 102 NLVAELDGHRPLVIAGDFNAWAVEW-GSKRTNSRG 135
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 23.8 bits (49), Expect = 4.9
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = -1
Query: 319 VVALGDFNAHHQEWLGSRTTDLPGRTAYD 233
+V+ +FN H ++W T +P Y+
Sbjct: 514 IVSTSNFNKHKEKWTAISDTGVPVDVKYN 542
>AF364130-1|AAL35506.1| 417|Anopheles gambiae putative odorant
receptor Or1 protein.
Length = 417
Score = 23.8 bits (49), Expect = 4.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 130 LWSAEGPTKKARAPRYLGHGWAV 198
LW E T +A RY+ +GWA+
Sbjct: 31 LWPPED-TDQATRNRYIAYGWAL 52
>AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox protein
protein.
Length = 338
Score = 23.4 bits (48), Expect = 6.4
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 326 CGGGGSWRLQRSPPRVVGVQNH*PPGS 246
CGGGG + P R + H P GS
Sbjct: 295 CGGGGGSDSEDLPQRSAEDRTHSPVGS 321
>Z22930-5|CAA80517.1| 275|Anopheles gambiae trypsin protein.
Length = 275
Score = 23.0 bits (47), Expect = 8.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 309 LETSTLTTKSGWG 271
+E T+TT SGWG
Sbjct: 162 VEDGTMTTVSGWG 174
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 23.0 bits (47), Expect = 8.5
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +1
Query: 307 QEPPPPQMGTAQARGWSPLAHAQTELNL 390
Q+P PP A + G P H+ N+
Sbjct: 939 QQPLPPAPAAASSAGVQPTEHSVNSTNV 966
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 763,687
Number of Sequences: 2352
Number of extensions: 17287
Number of successful extensions: 67
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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