Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc25a02
         (663 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   2.8  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             24   3.7  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.7  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   6.5  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   6.5  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   8.6  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
 Frame = -3

Query: 136  NKHIITHTHFSNNPQTV--FFLNVRTRAFV---YSTASLTTILNESR 11
            ++HI+ H  +SNN Q++  F   + T+      ++ AS    +NE R
Sbjct: 3270 SRHILQHKFYSNNSQSLNNFTFGLHTQEIFPLQFNKASSMATINEYR 3316


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 145 VISNKHIITHTHFSNNPQTVFFLNVRTRAFVYS 47
           +I   H+ +HT    +P T +F+NV      YS
Sbjct: 362 IILKSHVKSHTISELSPFTTYFVNVSAVPTDYS 394


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
 Frame = -3

Query: 136  NKHIITHTHFSNNPQTV--FFLNVRTRAFV---YSTASLTTILNESR 11
            ++HI+ H  +SNN Q++  F   + T+  +   ++ AS    +NE R
Sbjct: 3267 SRHILQHKLYSNNSQSLNNFKFGLHTQEILPLQFNKASSMATINEYR 3313


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 652  ATAGDGGSPEYCLSLVALP 596
            A + D GSPE C S +A P
Sbjct: 1385 AKSDDAGSPEGCGSNIAFP 1403


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +2

Query: 107 KVRMCDNVLVGYNSDVINN*EILYS 181
           KVRM D    GY  +VI   E L S
Sbjct: 370 KVRMGDGFFTGYRKNVIQPHEALVS 394


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 582 HSVPVGSATRDKQYSGLP 635
           H++PVG A   K  S LP
Sbjct: 551 HNIPVGGADSAKYVSALP 568


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 748,560
Number of Sequences: 2352
Number of extensions: 15439
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)