Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25a02
(663 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL359815-5|CAI16255.1| 693|Homo sapiens RAP1 GTPase activating ... 36 0.17
AB003930-1|BAA83674.1| 131|Homo sapiens rap1GAPII protein. 36 0.17
AL359815-8|CAI16258.1| 268|Homo sapiens RAP1 GTPase activating ... 33 0.91
AL359815-7|CAI16257.1| 327|Homo sapiens RAP1 GTPase activating ... 33 0.91
AB007943-1|BAA32319.3| 782|Homo sapiens KIAA0474 protein protein. 33 0.91
BC108907-1|AAI08908.2| 917|Homo sapiens TJP3 protein protein. 32 2.1
BC108906-1|AAI08907.1| 938|Homo sapiens TJP3 protein protein. 32 2.1
AC005954-1|AAC72274.1| 952|Homo sapiens ZO-3 [Homo sapiens] pro... 32 2.1
U54999-1|AAB40385.1| 677|Homo sapiens LGN protein protein. 31 3.7
CR456786-1|CAG33067.1| 677|Homo sapiens GPSM2 protein. 31 3.7
BC027732-1|AAH27732.1| 677|Homo sapiens G-protein signaling mod... 31 3.7
AY136740-1|AAN01266.1| 677|Homo sapiens LGN protein protein. 31 3.7
AL449266-9|CAI14361.1| 684|Homo sapiens G-protein signalling mo... 31 3.7
AK093319-1|BAC04131.1| 142|Homo sapiens protein ( Homo sapiens ... 31 4.9
BC003410-1|AAH03410.1| 140|Homo sapiens NTF2-like export factor... 30 6.4
BC003029-1|AAH03029.1| 140|Homo sapiens NTF2-like export factor... 30 6.4
BC002687-1|AAH02687.1| 140|Homo sapiens NTF2-like export factor... 30 6.4
BC000759-1|AAH00759.1| 140|Homo sapiens NTF2-like export factor... 30 6.4
AL096677-1|CAC03437.2| 140|Homo sapiens NTF2-like export factor... 30 6.4
AF156957-1|AAD54942.1| 140|Homo sapiens NTF2-related export pro... 30 6.4
AB065542-1|BAC05787.1| 307|Homo sapiens seven transmembrane hel... 30 6.4
>AL359815-5|CAI16255.1| 693|Homo sapiens RAP1 GTPase activating
protein protein.
Length = 693
Score = 35.5 bits (78), Expect = 0.17
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 438 PWSSSTAAGTRAQH-ELFELLERVQCSRLDDQRAVLPP 548
P S AG Q+ +LFE++E++Q SR+D+QR PP
Sbjct: 13 PRRGSLPAGASWQNTDLFEMIEKMQGSRMDEQRCSFPP 50
>AB003930-1|BAA83674.1| 131|Homo sapiens rap1GAPII protein.
Length = 131
Score = 35.5 bits (78), Expect = 0.17
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 438 PWSSSTAAGTRAQH-ELFELLERVQCSRLDDQRAVLPP 548
P S AG Q+ +LFE++E++Q SR+D+QR PP
Sbjct: 13 PRRGSLPAGASWQNTDLFEMIEKMQGSRMDEQRCSFPP 50
>AL359815-8|CAI16258.1| 268|Homo sapiens RAP1 GTPase activating
protein protein.
Length = 268
Score = 33.1 bits (72), Expect = 0.91
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +3
Query: 480 ELFELLERVQCSRLDDQRAVLPP 548
+LFE++E++Q SR+D+QR PP
Sbjct: 61 DLFEMIEKMQGSRMDEQRCSFPP 83
>AL359815-7|CAI16257.1| 327|Homo sapiens RAP1 GTPase activating
protein protein.
Length = 327
Score = 33.1 bits (72), Expect = 0.91
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +3
Query: 480 ELFELLERVQCSRLDDQRAVLPP 548
+LFE++E++Q SR+D+QR PP
Sbjct: 139 DLFEMIEKMQGSRMDEQRCSFPP 161
>AB007943-1|BAA32319.3| 782|Homo sapiens KIAA0474 protein protein.
Length = 782
Score = 33.1 bits (72), Expect = 0.91
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +3
Query: 480 ELFELLERVQCSRLDDQRAVLPP 548
+LFE++E++Q SR+D+QR PP
Sbjct: 98 DLFEMIEKMQGSRMDEQRCSFPP 120
>BC108907-1|AAI08908.2| 917|Homo sapiens TJP3 protein protein.
Length = 917
Score = 31.9 bits (69), Expect = 2.1
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +2
Query: 407 EETYAAARVGAMELFNSGGYSCSTRVI*AT*TSTVFAIRRSKGSTSAIFFSGYPAGEPSL 586
E +Y RV + + GYS TRV+ ++ +R + G+ IF SG AG P+
Sbjct: 358 ESSYDIYRVPSSQSMEDRGYSPDTRVVRFLKGKSI-GLRLAGGNDVGIFVSGVQAGSPAD 416
Query: 587 G 589
G
Sbjct: 417 G 417
>BC108906-1|AAI08907.1| 938|Homo sapiens TJP3 protein protein.
Length = 938
Score = 31.9 bits (69), Expect = 2.1
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +2
Query: 407 EETYAAARVGAMELFNSGGYSCSTRVI*AT*TSTVFAIRRSKGSTSAIFFSGYPAGEPSL 586
E +Y RV + + GYS TRV+ ++ +R + G+ IF SG AG P+
Sbjct: 377 ESSYDIYRVPSSQSMEDRGYSPDTRVVRFLKGKSI-GLRLAGGNDVGIFVSGVQAGSPAD 435
Query: 587 G 589
G
Sbjct: 436 G 436
>AC005954-1|AAC72274.1| 952|Homo sapiens ZO-3 [Homo sapiens]
protein.
Length = 952
Score = 31.9 bits (69), Expect = 2.1
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +2
Query: 407 EETYAAARVGAMELFNSGGYSCSTRVI*AT*TSTVFAIRRSKGSTSAIFFSGYPAGEPSL 586
E +Y RV + + GYS TRV+ ++ +R + G+ IF SG AG P+
Sbjct: 391 ESSYDIYRVPSSQSMEDRGYSPDTRVVRFLKGKSI-GLRLAGGNDVGIFVSGVQAGSPAD 449
Query: 587 G 589
G
Sbjct: 450 G 450
>U54999-1|AAB40385.1| 677|Homo sapiens LGN protein protein.
Length = 677
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 471 AQHELFELLERVQCSRLDDQRAVLPP 548
A + F++L + Q SRLDDQR PP
Sbjct: 586 ADEDFFDILVKCQGSRLDDQRCAPPP 611
>CR456786-1|CAG33067.1| 677|Homo sapiens GPSM2 protein.
Length = 677
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 471 AQHELFELLERVQCSRLDDQRAVLPP 548
A + F++L + Q SRLDDQR PP
Sbjct: 586 ADEDFFDILVKCQGSRLDDQRCAPPP 611
>BC027732-1|AAH27732.1| 677|Homo sapiens G-protein signaling
modulator 2 (AGS3-like, C. elegans) protein.
Length = 677
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 471 AQHELFELLERVQCSRLDDQRAVLPP 548
A + F++L + Q SRLDDQR PP
Sbjct: 586 ADEDFFDILVKCQGSRLDDQRCAPPP 611
>AY136740-1|AAN01266.1| 677|Homo sapiens LGN protein protein.
Length = 677
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 471 AQHELFELLERVQCSRLDDQRAVLPP 548
A + F++L + Q SRLDDQR PP
Sbjct: 586 ADEDFFDILVKCQGSRLDDQRCAPPP 611
>AL449266-9|CAI14361.1| 684|Homo sapiens G-protein signalling
modulator 2 (AGS3-like, C. elegans) protein.
Length = 684
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 471 AQHELFELLERVQCSRLDDQRAVLPP 548
A + F++L + Q SRLDDQR PP
Sbjct: 593 ADEDFFDILVKCQGSRLDDQRCAPPP 618
>AK093319-1|BAC04131.1| 142|Homo sapiens protein ( Homo sapiens
cDNA FLJ36000 fis, clone TESTI2015180. ).
Length = 142
Score = 30.7 bits (66), Expect = 4.9
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +3
Query: 87 TVCGLFEKCVCVIMCLLDITLM**IIKKYCIRETILGLFTMVIVSVFNRNFTVRKR 254
TVC F CVCV +C+ I + Y ++ GLF + V +F R VR+R
Sbjct: 80 TVCFCFCVCVCVCVCVSPILSS--LSVSYSFPLSV-GLFVSLCVCLFGRMCLVRQR 132
>BC003410-1|AAH03410.1| 140|Homo sapiens NTF2-like export factor 1
protein.
Length = 140
Score = 30.3 bits (65), Expect = 6.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 375 YTLLSARRRYMKKLMRQHVSAPWSSSTAAGTRAQHELFELL 497
YT + RRR + +L + W+ + +G + E FE+L
Sbjct: 25 YTTMDKRRRLLSRLYMGTATLVWNGNAVSGQESLSEFFEML 65
>BC003029-1|AAH03029.1| 140|Homo sapiens NTF2-like export factor 1
protein.
Length = 140
Score = 30.3 bits (65), Expect = 6.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 375 YTLLSARRRYMKKLMRQHVSAPWSSSTAAGTRAQHELFELL 497
YT + RRR + +L + W+ + +G + E FE+L
Sbjct: 25 YTTMDKRRRLLSRLYMGTATLVWNGNAVSGQESLSEFFEML 65
>BC002687-1|AAH02687.1| 140|Homo sapiens NTF2-like export factor 1
protein.
Length = 140
Score = 30.3 bits (65), Expect = 6.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 375 YTLLSARRRYMKKLMRQHVSAPWSSSTAAGTRAQHELFELL 497
YT + RRR + +L + W+ + +G + E FE+L
Sbjct: 25 YTTMDKRRRLLSRLYMGTATLVWNGNAVSGQESLSEFFEML 65
>BC000759-1|AAH00759.1| 140|Homo sapiens NTF2-like export factor 1
protein.
Length = 140
Score = 30.3 bits (65), Expect = 6.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 375 YTLLSARRRYMKKLMRQHVSAPWSSSTAAGTRAQHELFELL 497
YT + RRR + +L + W+ + +G + E FE+L
Sbjct: 25 YTTMDKRRRLLSRLYMGTATLVWNGNAVSGQESLSEFFEML 65
>AL096677-1|CAC03437.2| 140|Homo sapiens NTF2-like export factor 1
protein.
Length = 140
Score = 30.3 bits (65), Expect = 6.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 375 YTLLSARRRYMKKLMRQHVSAPWSSSTAAGTRAQHELFELL 497
YT + RRR + +L + W+ + +G + E FE+L
Sbjct: 25 YTTMDKRRRLLSRLYMGTATLVWNGNAVSGQESLSEFFEML 65
>AF156957-1|AAD54942.1| 140|Homo sapiens NTF2-related export
protein NXT1 protein.
Length = 140
Score = 30.3 bits (65), Expect = 6.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 375 YTLLSARRRYMKKLMRQHVSAPWSSSTAAGTRAQHELFELL 497
YT + RRR + +L + W+ + +G + E FE+L
Sbjct: 25 YTTMDKRRRLLSRLYMGTATLVWNGNAVSGQESLSEFFEML 65
>AB065542-1|BAC05787.1| 307|Homo sapiens seven transmembrane helix
receptor protein.
Length = 307
Score = 30.3 bits (65), Expect = 6.4
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -3
Query: 232 LLKTLTITIVNNPKI-VSRIQYFLIIYYIRVISNKHIITHTHFSNNPQTVFFLNVRTRAF 56
L + + + + P++ + FL+IY I V+ N +I T ++ T + ++R AF
Sbjct: 9 LTEFILMELTRRPELQIPLFGVFLVIYLITVVGNLTMIILTKLDSHLHTPMYFSIRHLAF 68
Query: 55 V 53
V
Sbjct: 69 V 69
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,625,894
Number of Sequences: 237096
Number of extensions: 2291529
Number of successful extensions: 9238
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 9065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9237
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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