Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc25a02
(663 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF408761-1|AAO27840.1| 741|Caenorhabditis elegans Rap1GAP protein. 35 0.059
AF016660-1|AAK71368.1| 742|Caenorhabditis elegans Hypothetical ... 35 0.059
U46668-5|AAA93349.2| 569|Caenorhabditis elegans Hypothetical pr... 30 1.3
AC017117-3|AAF16619.1| 339|Caenorhabditis elegans Hypothetical ... 30 1.3
U40409-5|AAL27247.1| 589|Caenorhabditis elegans Activator of g ... 29 2.2
U40409-4|AAA81387.1| 579|Caenorhabditis elegans Activator of g ... 29 2.2
AF408756-1|AAO27835.1| 280|Caenorhabditis elegans AGS3.1 protein. 29 2.2
Z81035-1|CAB02735.1| 221|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z49907-11|CAF31469.1| 844|Caenorhabditis elegans Hypothetical p... 27 9.0
Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical p... 27 9.0
Z49907-9|CAA90092.1| 880|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z48367-8|CAF31471.1| 844|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical pr... 27 9.0
U88308-2|AAM15557.1| 313|Caenorhabditis elegans Hypothetical pr... 27 9.0
U88308-1|AAB42324.2| 461|Caenorhabditis elegans Hypothetical pr... 27 9.0
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 27 9.0
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 27 9.0
AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type chlo... 27 9.0
AF173171-1|AAF13164.1| 844|Caenorhabditis elegans CLC chloride ... 27 9.0
AF068709-14|AAC19258.2| 312|Caenorhabditis elegans Serpentine r... 27 9.0
>AF408761-1|AAO27840.1| 741|Caenorhabditis elegans Rap1GAP protein.
Length = 741
Score = 34.7 bits (76), Expect = 0.059
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +3
Query: 402 YMKKLMRQHVSAPWSSSTAAGTRAQHELFELLERVQCSRLDDQRAVLPPYFSQVT---RP 572
Y + L R H +++ + ++ER+Q +RLDDQR +P T +
Sbjct: 54 YYRDLERMHERGLFTTGINYNAEKSEDFLNMIERMQSNRLDDQRCEMPERTHNPTSGHQN 113
Query: 573 ENRHSVPVGSATRDK 617
E H GSA ++
Sbjct: 114 EQTHQKTNGSAVHNQ 128
>AF016660-1|AAK71368.1| 742|Caenorhabditis elegans Hypothetical
protein F53A10.2a protein.
Length = 742
Score = 34.7 bits (76), Expect = 0.059
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +3
Query: 402 YMKKLMRQHVSAPWSSSTAAGTRAQHELFELLERVQCSRLDDQRAVLPPYFSQVT---RP 572
Y + L R H +++ + ++ER+Q +RLDDQR +P T +
Sbjct: 55 YYRDLERMHERGLFTTGINYNAEKSEDFLNMIERMQSNRLDDQRCEMPERTHNPTSGHQN 114
Query: 573 ENRHSVPVGSATRDK 617
E H GSA ++
Sbjct: 115 EQTHQKTNGSAVHNQ 129
>U46668-5|AAA93349.2| 569|Caenorhabditis elegans Hypothetical
protein F38E9.1 protein.
Length = 569
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +1
Query: 454 QRRVLVLNTSYLSYLNEYSVRD*TIKGQYFRHIFLRLPGRRTVTRCPWEVPLETNSIQDF 633
+ VL+LN S++ + EY R ++F H F + R ++ CP +V L ++ +
Sbjct: 139 KEEVLILNVSHIYRMTEYDFR------RFFLHPFSSIAERCGISLCPTDVDLRIVTLDEL 192
Query: 634 --HHLQLLLVRP 663
++++V P
Sbjct: 193 IEKEFRIIVVGP 204
>AC017117-3|AAF16619.1| 339|Caenorhabditis elegans Hypothetical
protein F43C11.9 protein.
Length = 339
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 311 NPNEVESCENENIAH-RRAKRILHVIVSEKEIHEETYAAAR 430
N ++V++C NE IAH R+ +++ + +K+ E + + R
Sbjct: 10 NAHQVQNCNNEKIAHERKMEKVFEFLAEDKKTFEASNSFER 50
>U40409-5|AAL27247.1| 589|Caenorhabditis elegans Activator of g
protein signallingprotein 3, isoform b protein.
Length = 589
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 483 LFELLERVQCSRLDDQRAVLPP 548
L E L RVQ RLD+QR+ LPP
Sbjct: 524 LVEWLMRVQGERLDEQRSELPP 545
>U40409-4|AAA81387.1| 579|Caenorhabditis elegans Activator of g
protein signallingprotein 3, isoform a protein.
Length = 579
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 483 LFELLERVQCSRLDDQRAVLPP 548
L E L RVQ RLD+QR+ LPP
Sbjct: 514 LVEWLMRVQGERLDEQRSELPP 535
>AF408756-1|AAO27835.1| 280|Caenorhabditis elegans AGS3.1 protein.
Length = 280
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 483 LFELLERVQCSRLDDQRAVLPP 548
L E L RVQ RLD+QR+ LPP
Sbjct: 215 LVEWLMRVQGERLDEQRSELPP 236
>Z81035-1|CAB02735.1| 221|Caenorhabditis elegans Hypothetical
protein C15H11.1 protein.
Length = 221
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 570 PENRHSVPVGSATRDK-QYSGLPPSPAVA 653
P+ H + V +T ++ +YS LPP+P VA
Sbjct: 111 PQGEHKLRVTPSTEEQMEYSALPPTPTVA 139
>Z49907-11|CAF31469.1| 844|Caenorhabditis elegans Hypothetical
protein B0491.8c protein.
Length = 844
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 339 MKILPTGGQKESYTLL-SARRRYMKKLMRQHVSAPWSSSTAAGTRAQHELFELLER 503
++ P E+ LL S +RY+ L+R+HV S G E+F + R
Sbjct: 576 LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEIFNTIRR 631
>Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 339 MKILPTGGQKESYTLL-SARRRYMKKLMRQHVSAPWSSSTAAGTRAQHELFELLER 503
++ P E+ LL S +RY+ L+R+HV S G E+F + R
Sbjct: 607 LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEIFNTIRR 662
>Z49907-9|CAA90092.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 339 MKILPTGGQKESYTLL-SARRRYMKKLMRQHVSAPWSSSTAAGTRAQHELFELLER 503
++ P E+ LL S +RY+ L+R+HV S G E+F + R
Sbjct: 612 LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEIFNTIRR 667
>Z48367-8|CAF31471.1| 844|Caenorhabditis elegans Hypothetical
protein B0491.8c protein.
Length = 844
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 339 MKILPTGGQKESYTLL-SARRRYMKKLMRQHVSAPWSSSTAAGTRAQHELFELLER 503
++ P E+ LL S +RY+ L+R+HV S G E+F + R
Sbjct: 576 LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEIFNTIRR 631
>Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 339 MKILPTGGQKESYTLL-SARRRYMKKLMRQHVSAPWSSSTAAGTRAQHELFELLER 503
++ P E+ LL S +RY+ L+R+HV S G E+F + R
Sbjct: 607 LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEIFNTIRR 662
>Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 339 MKILPTGGQKESYTLL-SARRRYMKKLMRQHVSAPWSSSTAAGTRAQHELFELLER 503
++ P E+ LL S +RY+ L+R+HV S G E+F + R
Sbjct: 612 LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEIFNTIRR 667
>U88308-2|AAM15557.1| 313|Caenorhabditis elegans Hypothetical
protein C32E8.6b protein.
Length = 313
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 456 AAGTRAQHELFELLERVQCSRLDDQRAVL--PPYFSQVT 566
++GT + FE +R+ CS++D +A+ P +FS T
Sbjct: 152 SSGTTGPPKQFEYTQRILCSQIDQIKAIRSDPRFFSPST 190
>U88308-1|AAB42324.2| 461|Caenorhabditis elegans Hypothetical
protein C32E8.6a protein.
Length = 461
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 456 AAGTRAQHELFELLERVQCSRLDDQRAVL--PPYFSQVT 566
++GT + FE +R+ CS++D +A+ P +FS T
Sbjct: 152 SSGTTGPPKQFEYTQRILCSQIDQIKAIRSDPRFFSPST 190
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -2
Query: 254 PLPNGEVPVKNTDDNHSKQSQNSLANTIFLNYLLHQSYIQQAHY 123
P+P +VPV+ D S QS ++ + T+ N+ H S + Y
Sbjct: 1039 PVPK-DVPVRQEDATTSSQSHDNSSRTVSPNHRHHSSSYSNSCY 1081
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -2
Query: 254 PLPNGEVPVKNTDDNHSKQSQNSLANTIFLNYLLHQSYIQQAHY 123
P+P +VPV+ D S QS ++ + T+ N+ H S + Y
Sbjct: 1053 PVPK-DVPVRQEDATTSSQSHDNSSRTVSPNHRHHSSSYSNSCY 1095
>AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type
chloride channel CLH-2b protein.
Length = 880
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 339 MKILPTGGQKESYTLL-SARRRYMKKLMRQHVSAPWSSSTAAGTRAQHELFELLER 503
++ P E+ LL S +RY+ L+R+HV S G E+F + R
Sbjct: 612 LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEIFNTIRR 667
>AF173171-1|AAF13164.1| 844|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 844
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 339 MKILPTGGQKESYTLL-SARRRYMKKLMRQHVSAPWSSSTAAGTRAQHELFELLER 503
++ P E+ LL S +RY+ L+R+HV S G E+F + R
Sbjct: 576 LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEIFNTIRR 631
>AF068709-14|AAC19258.2| 312|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 61 protein.
Length = 312
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -2
Query: 638 WWKS*ILFVSSGTSHGHRVT-VLRPGNLRKIWRKYCPLIV*SRTLYSF 498
WW I F+++ HR+T +L K W +Y + LYSF
Sbjct: 106 WWFMHIQFLTASVLSVHRITAILSAARYEKSWARYYFVCGILFALYSF 153
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,389,305
Number of Sequences: 27780
Number of extensions: 363408
Number of successful extensions: 1050
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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