Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24p18
(515 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical pr... 33 0.092
Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical pr... 33 0.092
AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha ki... 33 0.092
AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic tr... 33 0.092
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 29 1.5
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 29 1.5
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 29 1.5
Z81128-4|CAB03403.1| 898|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr... 28 3.4
AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical... 28 3.4
Z99268-1|CAB16466.1| 715|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z81573-4|CAB04627.1| 715|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z49908-10|CAA90103.1| 715|Caenorhabditis elegans Hypothetical p... 27 8.0
U23177-7|AAM22053.1| 867|Caenorhabditis elegans Hypothetical pr... 27 8.0
EU068465-1|ABU49430.1| 715|Caenorhabditis elegans PRO-2 protein. 27 8.0
>Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 33.5 bits (73), Expect = 0.092
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +2
Query: 284 SSKEVGEIKPEMNA-AVSTESMDMTEEDMSQVEGCGLSGGSEDEDE---CASSPAGSNYD 451
S + E+K E A + S E D TE+ S E S GS +DE SS G +
Sbjct: 767 SDRTTAELKEESVAFSESDEESDTTEDSSSSDESPSSSSGSSIDDEPKKYNSSSGGIEFV 826
Query: 452 DGNDIIKN 475
DG+D + N
Sbjct: 827 DGSDDVDN 834
>Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 33.5 bits (73), Expect = 0.092
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +2
Query: 284 SSKEVGEIKPEMNA-AVSTESMDMTEEDMSQVEGCGLSGGSEDEDE---CASSPAGSNYD 451
S + E+K E A + S E D TE+ S E S GS +DE SS G +
Sbjct: 767 SDRTTAELKEESVAFSESDEESDTTEDSSSSDESPSSSSGSSIDDEPKKYNSSSGGIEFV 826
Query: 452 DGNDIIKN 475
DG+D + N
Sbjct: 827 DGSDDVDN 834
>AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha
kinase protein.
Length = 1077
Score = 33.5 bits (73), Expect = 0.092
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +2
Query: 284 SSKEVGEIKPEMNA-AVSTESMDMTEEDMSQVEGCGLSGGSEDEDE---CASSPAGSNYD 451
S + E+K E A + S E D TE+ S E S GS +DE SS G +
Sbjct: 767 SDRTTAELKEESVAFSESDEESDTTEDSSSSDESPSSSSGSSIDDEPKKYNSSSGGIEFV 826
Query: 452 DGNDIIKN 475
DG+D + N
Sbjct: 827 DGSDDVDN 834
>AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic
translation initiationfactor 2 alpha kinase PEK protein.
Length = 1077
Score = 33.5 bits (73), Expect = 0.092
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +2
Query: 284 SSKEVGEIKPEMNA-AVSTESMDMTEEDMSQVEGCGLSGGSEDEDE---CASSPAGSNYD 451
S + E+K E A + S E D TE+ S E S GS +DE SS G +
Sbjct: 767 SDRTTAELKEESVAFSESDEESDTTEDSSSSDESPSSSSGSSIDDEPKKYNSSSGGIEFV 826
Query: 452 DGNDIIKN 475
DG+D + N
Sbjct: 827 DGSDDVDN 834
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 242 CN*IHQTQMVHELRSSKEVGEIKPEMNAAVSTESMDMTEEDMSQVEGC 385
C+ + Q Q V ++ + K++ ++ +NAA ++ EE SQ+ GC
Sbjct: 2935 CSELLQWQNVADVCNGKDMQHVRGLINAASHIPDWNVVEECKSQIAGC 2982
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 242 CN*IHQTQMVHELRSSKEVGEIKPEMNAAVSTESMDMTEEDMSQVEGC 385
C+ + Q Q V ++ + K++ ++ +NAA ++ EE SQ+ GC
Sbjct: 2946 CSELLQWQNVADVCNGKDMQHVRGLINAASHIPDWNVVEECKSQIAGC 2993
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 242 CN*IHQTQMVHELRSSKEVGEIKPEMNAAVSTESMDMTEEDMSQVEGC 385
C+ + Q Q V ++ + K++ ++ +NAA ++ EE SQ+ GC
Sbjct: 2946 CSELLQWQNVADVCNGKDMQHVRGLINAASHIPDWNVVEECKSQIAGC 2993
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 242 CN*IHQTQMVHELRSSKEVGEIKPEMNAAVSTESMDMTEEDMSQVEGC 385
C+ + Q Q V ++ + K++ ++ +NAA ++ EE SQ+ GC
Sbjct: 2946 CSELLQWQNVADVCNGKDMQHVRGLINAASHIPDWNVVEECKSQIAGC 2993
>Z81128-4|CAB03403.1| 898|Caenorhabditis elegans Hypothetical
protein T23D8.4 protein.
Length = 898
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +2
Query: 269 VHELRSSKEVGEIKPEMNAAVSTESMDMTEEDMSQVEGCGLSGGSEDED 415
V E ++ K G KP AAVS D ++D S S S+DED
Sbjct: 188 VSESKAEKSPG--KPSEKAAVSDSDSDSDDDDSSNWSSEPESNSSDDED 234
>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical protein
K09C8.5 protein.
Length = 1328
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +3
Query: 69 RSFCEISVPPSVNAIKSVIWNGLHHSGLPKLGFGSQNVSQITQALNTKRTS 221
R FC ++VP + + +K+++ N S L L ++N+ + KRT+
Sbjct: 1108 RKFCNLTVPKTWSDMKNIVQNDTVISKLQSLYGVTENIDLWVGGVTEKRTA 1158
>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical protein
K09C8.5 protein.
Length = 1328
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +3
Query: 69 RSFCEISVPPSVNAIKSVIWNGLHHSGLPKLGFGSQNVSQITQALNTKRTS 221
R FC ++VP + + +K+++ N S L L ++N+ + KRT+
Sbjct: 1108 RKFCNLTVPKTWSDMKNIVQNDTVISKLQSLYGVTENIDLWVGGVTEKRTA 1158
>AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical
protein Y62H9A.13 protein.
Length = 348
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 308 KPEMNAAVSTESMDMTEEDMSQVEGCGLSGGSEDEDECASSPAGSNYDDGNDI 466
+P N + TES + T+ D + G E E + SNYD+ N++
Sbjct: 151 EPPENQPMPTESNNQTQSDDGETTGEQKDVKIESLSESCGNVLSSNYDEINEV 203
>Z99268-1|CAB16466.1| 715|Caenorhabditis elegans Hypothetical
protein C07E3.2 protein.
Length = 715
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 332 STESMDMTEEDMSQVEGCGLSGGSEDEDE 418
S+E ++E++ +++G G GSEDED+
Sbjct: 27 SSEDEGSSDEEVPKLDGEGSLDGSEDEDD 55
>Z81573-4|CAB04627.1| 715|Caenorhabditis elegans Hypothetical
protein C07E3.2 protein.
Length = 715
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 332 STESMDMTEEDMSQVEGCGLSGGSEDEDE 418
S+E ++E++ +++G G GSEDED+
Sbjct: 27 SSEDEGSSDEEVPKLDGEGSLDGSEDEDD 55
>Z49908-10|CAA90103.1| 715|Caenorhabditis elegans Hypothetical
protein C07E3.2 protein.
Length = 715
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 332 STESMDMTEEDMSQVEGCGLSGGSEDEDE 418
S+E ++E++ +++G G GSEDED+
Sbjct: 27 SSEDEGSSDEEVPKLDGEGSLDGSEDEDD 55
>U23177-7|AAM22053.1| 867|Caenorhabditis elegans Hypothetical
protein C56G2.1a protein.
Length = 867
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +2
Query: 251 IHQTQMVHELRSSKEVGEIKPEMNAAVSTESMDMTEE 361
+HQ Q H+ + +E G+IK +S++ T E
Sbjct: 416 VHQPQQQHQQQKKEEQGQIKKGQRRLTKEKSVEETPE 452
>EU068465-1|ABU49430.1| 715|Caenorhabditis elegans PRO-2 protein.
Length = 715
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 332 STESMDMTEEDMSQVEGCGLSGGSEDEDE 418
S+E ++E++ +++G G GSEDED+
Sbjct: 27 SSEDEGSSDEEVPKLDGEGSLDGSEDEDD 55
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,400,877
Number of Sequences: 27780
Number of extensions: 223857
Number of successful extensions: 691
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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