Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24p05
(713 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT006642-1|AAP35288.1| 459|Homo sapiens zinc finger protein 259... 34 0.44
BC111028-1|AAI11029.1| 459|Homo sapiens zinc finger protein 259... 34 0.44
BC017380-1|AAH17380.1| 459|Homo sapiens zinc finger protein 259... 34 0.44
BC017349-1|AAH17349.1| 459|Homo sapiens zinc finger protein 259... 34 0.44
BC012162-1|AAH12162.1| 459|Homo sapiens zinc finger protein 259... 34 0.44
BC004256-1|AAH04256.1| 459|Homo sapiens zinc finger protein 259... 34 0.44
AF019767-1|AAC33514.1| 459|Homo sapiens zinc finger protein pro... 34 0.44
AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein pr... 31 4.1
AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated pr... 31 4.1
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 31 5.4
AK057946-1|BAB71619.1| 517|Homo sapiens protein ( Homo sapiens ... 30 7.2
>BT006642-1|AAP35288.1| 459|Homo sapiens zinc finger protein 259
protein.
Length = 459
Score = 34.3 bits (75), Expect = 0.44
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 488 PPVAPEPPRKPFKLFRPYLLEDEDEKRPSIASL 586
P AP PP P LFRP EDE+++ I SL
Sbjct: 18 PSPAPAPPPAPDHLFRPISAEDEEQQPTEIESL 50
>BC111028-1|AAI11029.1| 459|Homo sapiens zinc finger protein 259
protein.
Length = 459
Score = 34.3 bits (75), Expect = 0.44
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 488 PPVAPEPPRKPFKLFRPYLLEDEDEKRPSIASL 586
P AP PP P LFRP EDE+++ I SL
Sbjct: 18 PSPAPAPPPAPDHLFRPISAEDEEQQPTEIESL 50
>BC017380-1|AAH17380.1| 459|Homo sapiens zinc finger protein 259
protein.
Length = 459
Score = 34.3 bits (75), Expect = 0.44
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 488 PPVAPEPPRKPFKLFRPYLLEDEDEKRPSIASL 586
P AP PP P LFRP EDE+++ I SL
Sbjct: 18 PSPAPAPPPAPDHLFRPISAEDEEQQPTEIESL 50
>BC017349-1|AAH17349.1| 459|Homo sapiens zinc finger protein 259
protein.
Length = 459
Score = 34.3 bits (75), Expect = 0.44
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 488 PPVAPEPPRKPFKLFRPYLLEDEDEKRPSIASL 586
P AP PP P LFRP EDE+++ I SL
Sbjct: 18 PSPAPAPPPAPDHLFRPISAEDEEQQPTEIESL 50
>BC012162-1|AAH12162.1| 459|Homo sapiens zinc finger protein 259
protein.
Length = 459
Score = 34.3 bits (75), Expect = 0.44
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 488 PPVAPEPPRKPFKLFRPYLLEDEDEKRPSIASL 586
P AP PP P LFRP EDE+++ I SL
Sbjct: 18 PSPAPAPPPAPDHLFRPISAEDEEQQPTEIESL 50
>BC004256-1|AAH04256.1| 459|Homo sapiens zinc finger protein 259
protein.
Length = 459
Score = 34.3 bits (75), Expect = 0.44
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 488 PPVAPEPPRKPFKLFRPYLLEDEDEKRPSIASL 586
P AP PP P LFRP EDE+++ I SL
Sbjct: 18 PSPAPAPPPAPDHLFRPISAEDEEQQPTEIESL 50
>AF019767-1|AAC33514.1| 459|Homo sapiens zinc finger protein
protein.
Length = 459
Score = 34.3 bits (75), Expect = 0.44
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 488 PPVAPEPPRKPFKLFRPYLLEDEDEKRPSIASL 586
P AP PP P LFRP EDE+++ I SL
Sbjct: 18 PSPAPAPPPAPDHLFRPISAEDEEQQPTEIESL 50
>AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein
protein.
Length = 2701
Score = 31.1 bits (67), Expect = 4.1
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +2
Query: 416 ALVQPSTEP-IDLSVRRCSPLTLAHPPVAPEPPRKPFKLFRPYLLEDEDEKRPSIASLPV 592
A + PST + S P TL P + P P P +L P+ PV
Sbjct: 1752 APLPPSTSASVPASTSAPLPATLTPVPASTSAP-VPASTLAP-VLASTSAPVPASPLAPV 1809
Query: 593 SNTGYVSAFVPVQSAAGCALTACSAP 670
S + VSA VP ++A A+T+ SAP
Sbjct: 1810 SASASVSASVPASTSA-AAITSSSAP 1834
>AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated protein
2 protein.
Length = 2701
Score = 31.1 bits (67), Expect = 4.1
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +2
Query: 416 ALVQPSTEP-IDLSVRRCSPLTLAHPPVAPEPPRKPFKLFRPYLLEDEDEKRPSIASLPV 592
A + PST + S P TL P + P P P +L P+ PV
Sbjct: 1752 APLPPSTSASVPASTSAPLPATLTPVPASTSAP-VPASTLAP-VLASTSAPVPASPLAPV 1809
Query: 593 SNTGYVSAFVPVQSAAGCALTACSAP 670
S + VSA VP ++A A+T+ SAP
Sbjct: 1810 SASASVSASVPASTSA-AAITSSSAP 1834
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 30.7 bits (66), Expect = 5.4
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +2
Query: 419 LVQPSTEPIDLSVRRCSPLTLAHPPVAPEPPRKPFKLFRPYLLEDEDEKRPSIASLPVSN 598
L QP E + +S+ PL PP+ P PP P + +P ++E+E+ + + +
Sbjct: 589 LSQPYVEGLCVSLEPLPPL----PPLPPLPPEDPEQPPKPPFADEEEEEEMLLREELLKS 644
Query: 599 TGYVSAFVPVQSAA 640
AF P ++++
Sbjct: 645 LANKRAFKPEETSS 658
>AK057946-1|BAB71619.1| 517|Homo sapiens protein ( Homo sapiens
cDNA FLJ25217 fis, clone REC08938, highly similar to
Oryctolagus cuniculus Na+/glucose cotransporter-related
protein ).
Length = 517
Score = 30.3 bits (65), Expect = 7.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 587 PVSNTGYVSAFVPVQSAAGCALTACSAPHWCAAMPSY 697
P ++ Y+S F A+G A T S P +C + P Y
Sbjct: 19 PQRSSPYLSTFRSATGASGSACTCLSCPCYCLSSPRY 55
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,860,486
Number of Sequences: 237096
Number of extensions: 1793954
Number of successful extensions: 9723
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9680
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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