Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24p05
(713 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.94
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.94
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 24 1.6
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 2.9
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 23 3.8
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 3.8
U15954-1|AAA67442.1| 53|Apis mellifera abaecin precursor protein. 22 5.0
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 5.0
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 5.0
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 5.0
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 5.0
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 5.0
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 5.0
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 5.0
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 5.0
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 5.0
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 5.0
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 5.0
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 5.0
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 5.0
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 5.0
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 5.0
AF442147-1|AAL35348.1| 33|Apis mellifera abaecin precursor pro... 22 5.0
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 22 6.6
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 8.8
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 21 8.8
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 21 8.8
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.94
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = -1
Query: 425 VPMLEQVEV*AMKLTLAS*EVEVV*VILHFRGNQQHMEEVMAPAVE 288
VP+L + + AM L S V VV + +HFR Q H MAP V+
Sbjct: 304 VPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHK---MAPWVK 346
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.94
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = -1
Query: 425 VPMLEQVEV*AMKLTLAS*EVEVV*VILHFRGNQQHMEEVMAPAVE 288
VP+L + + AM L S V VV + +HFR Q H MAP V+
Sbjct: 304 VPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHK---MAPWVK 346
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.8 bits (49), Expect = 1.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -1
Query: 425 VPMLEQVEV*AMKLTLAS*EVEVV*VILHFRGNQQHMEEVMAPAV 291
VP+L + + M L S V VV + +HFR Q H VMAP V
Sbjct: 300 VPLLGKFVLFTMILDTFSICVTVVVLNVHFRSPQTH---VMAPWV 341
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 23.0 bits (47), Expect = 2.9
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 614 AFVPVQSAAGCALTACSAPHW 676
AF P+ G + CSAP W
Sbjct: 533 AFSPLSLLGGPLVMVCSAPVW 553
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 308 VMAPAVELSLTAPLAKQVQLVATFGSVCDGCQT 210
+ +P+V T P +++AT SV + CQT
Sbjct: 15 ICSPSVHCG-TRPSFVSDEMIATAASVVNACQT 46
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 DRRAEGRAGSRRIFPPQFKLQV 151
DRR GR+ RI P + Q+
Sbjct: 317 DRRGRGRSREHRIIPSHYIEQI 338
>U15954-1|AAA67442.1| 53|Apis mellifera abaecin precursor protein.
Length = 53
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = +2
Query: 464 CSPLTLAHPPVAPEPPRKPFKLF 532
C+ P P+P R+PF F
Sbjct: 15 CAAFAYVPLPNVPQPGRRPFPTF 37
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 DRRAEGRAGSRRIFPPQFKLQV 151
DRR GR+ RI P + Q+
Sbjct: 69 DRRERGRSREHRIIPSHYIEQI 90
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 DRRAEGRAGSRRIFPPQFKLQV 151
DRR GR+ RI P + Q+
Sbjct: 69 DRRERGRSREHRIIPSHYIEQI 90
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 DRRAEGRAGSRRIFPPQFKLQV 151
DRR GR+ RI P + Q+
Sbjct: 69 DRRERGRSREHRIIPSHYIEQI 90
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 DRRAEGRAGSRRIFPPQFKLQV 151
DRR GR+ RI P + Q+
Sbjct: 69 DRRERGRSREHRIIPSHYIEQI 90
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 DRRAEGRAGSRRIFPPQFKLQV 151
DRR GR+ RI P + Q+
Sbjct: 69 DRRERGRSREHRIIPSHYIEQI 90
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 DRRAEGRAGSRRIFPPQFKLQV 151
DRR GR+ RI P + Q+
Sbjct: 69 DRRERGRSREHRIIPSHYIEQI 90
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 DRRAEGRAGSRRIFPPQFKLQV 151
DRR GR+ RI P + Q+
Sbjct: 69 DRRERGRSREHRIIPSHYIEQI 90
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 DRRAEGRAGSRRIFPPQFKLQV 151
DRR GR+ RI P + Q+
Sbjct: 318 DRRERGRSREHRIIPSHYIEQI 339
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 DRRAEGRAGSRRIFPPQFKLQV 151
DRR GR+ RI P + Q+
Sbjct: 318 DRRERGRSREHRIIPSHYIEQI 339
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 DRRAEGRAGSRRIFPPQFKLQV 151
DRR GR+ RI P + Q+
Sbjct: 318 DRRERGRSREHRIIPSHYIEQI 339
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 DRRAEGRAGSRRIFPPQFKLQV 151
DRR GR+ RI P + Q+
Sbjct: 318 DRRERGRSREHRIIPSHYIEQI 339
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 DRRAEGRAGSRRIFPPQFKLQV 151
DRR GR+ RI P + Q+
Sbjct: 318 DRRERGRSREHRIIPSHYIEQI 339
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 DRRAEGRAGSRRIFPPQFKLQV 151
DRR GR+ RI P + Q+
Sbjct: 318 DRRERGRSREHRIIPSHYIEQI 339
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 DRRAEGRAGSRRIFPPQFKLQV 151
DRR GR+ RI P + Q+
Sbjct: 302 DRRERGRSREHRIIPSHYIEQI 323
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 86 DRRAEGRAGSRRIFPPQFKLQV 151
DRR GR+ RI P + Q+
Sbjct: 318 DRRERGRSREHRIIPSHYIEQI 339
>AF442147-1|AAL35348.1| 33|Apis mellifera abaecin precursor
protein.
Length = 33
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = +2
Query: 464 CSPLTLAHPPVAPEPPRKPFKLF 532
C+ P P+P R+PF F
Sbjct: 1 CAAFAYVPLPNVPQPGRRPFPTF 23
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.8 bits (44), Expect = 6.6
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 387 FHCLHLYLFKHWYSRQQNL*IYQYGDV 467
F+ L+ + + QQ+L +YQY D+
Sbjct: 434 FYQLYKKVMNLYQQYQQSLPVYQYNDL 460
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.4 bits (43), Expect = 8.8
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = -3
Query: 75 GAGCVWAAAILLWIRVRVLVDG 10
G G +W ++ + R V+V G
Sbjct: 136 GCGSIWTMTMIAFDRYNVIVKG 157
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 21.4 bits (43), Expect = 8.8
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = -3
Query: 75 GAGCVWAAAILLWIRVRVLVDG 10
G G +W ++ + R V+V G
Sbjct: 102 GCGSIWTMTMIAFDRYNVIVKG 123
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 21.4 bits (43), Expect = 8.8
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = -3
Query: 75 GAGCVWAAAILLWIRVRVLVDG 10
G G +W ++ + R V+V G
Sbjct: 12 GCGSIWTMTMIAFDRYNVIVKG 33
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,203
Number of Sequences: 438
Number of extensions: 3509
Number of successful extensions: 34
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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