Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24n22
         (719 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK027056-1|BAB15641.1|  544|Homo sapiens protein ( Homo sapiens ...    30   7.3  
BC003168-1|AAH03168.2|  764|Homo sapiens oxysterol binding prote...    30   9.6  
AK000370-1|BAA91118.1|  591|Homo sapiens protein ( Homo sapiens ...    30   9.6  
AF392451-1|AAL40664.1|  764|Homo sapiens oxysterol-binding prote...    30   9.6  
AB209872-1|BAD93109.1|  537|Homo sapiens oxysterol-binding prote...    30   9.6  

>AK027056-1|BAB15641.1|  544|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23403 fis, clone HEP18857. ).
          Length = 544

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = -1

Query: 128 VELSVFLIVKNIYFYLFISKCYNLGSKTCFTTAHNKFSLLI 6
           + LS ++ V++IY ++FI KC+    K  FT +  +  L +
Sbjct: 215 LSLSSWICVEDIYAHIFILKCWRESEKPIFTMSAQQSQLKV 255


>BC003168-1|AAH03168.2|  764|Homo sapiens oxysterol binding
           protein-like 10 protein.
          Length = 764

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -2

Query: 451 ISCKIRGQICGTLIYIFSN--IKYADSTTLKLYNRSVSLLDDKHQLVS 314
           I CK  G+  GTL + ++N   K  D+TTL +Y + +  L+ +  + S
Sbjct: 651 IVCKAHGEWNGTLEFTYNNGETKVIDTTTLPVYPKKIRPLEKQGPMES 698


>AK000370-1|BAA91118.1|  591|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20363 fis, clone HEP17001. ).
          Length = 591

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -2

Query: 451 ISCKIRGQICGTLIYIFSN--IKYADSTTLKLYNRSVSLLDDKHQLVS 314
           I CK  G+  GTL + ++N   K  D+TTL +Y + +  L+ +  + S
Sbjct: 478 IVCKAHGEWNGTLEFTYNNGETKVIDTTTLPVYPKKIRPLEKQGPMES 525


>AF392451-1|AAL40664.1|  764|Homo sapiens oxysterol-binding
           protein-like protein OSBPL10 protein.
          Length = 764

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -2

Query: 451 ISCKIRGQICGTLIYIFSN--IKYADSTTLKLYNRSVSLLDDKHQLVS 314
           I CK  G+  GTL + ++N   K  D+TTL +Y + +  L+ +  + S
Sbjct: 651 IVCKAHGEWNGTLEFTYNNGETKVIDTTTLPVYPKKIRPLEKQGPMES 698


>AB209872-1|BAD93109.1|  537|Homo sapiens oxysterol-binding
           protein-like protein 10 variant protein.
          Length = 537

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -2

Query: 451 ISCKIRGQICGTLIYIFSN--IKYADSTTLKLYNRSVSLLDDKHQLVS 314
           I CK  G+  GTL + ++N   K  D+TTL +Y + +  L+ +  + S
Sbjct: 419 IVCKAHGEWNGTLEFTYNNGETKVIDTTTLPVYPKKIRPLEKQGPMES 466


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,672,100
Number of Sequences: 237096
Number of extensions: 1718690
Number of successful extensions: 2453
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2453
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)