Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24n15
(680 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 34 0.12
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 33 0.16
10_06_0131 - 11066033-11066251,11066548-11067012,11067102-110681... 32 0.48
04_03_0013 + 9393423-9393747,9396577-9396657,9397491-9397594,939... 31 1.1
01_06_1694 + 39246262-39247320,39247464-39247590,39248638-392487... 30 1.5
03_01_0248 - 1932992-1933423,1933440-1933489,1933558-1933606,193... 30 2.0
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 30 2.0
03_01_0247 - 1929000-1929475,1929566-1929614,1929732-1929884 29 2.6
03_06_0748 - 35971065-35971268,35972022-35972597 29 3.4
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663... 29 3.4
11_01_0530 - 4164590-4165264,4165378-4165467,4167482-4168011,416... 29 4.5
09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821 29 4.5
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 29 4.5
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 29 4.5
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 29 4.5
06_01_0897 - 6903294-6903401,6903781-6903855,6904239-6904379,690... 29 4.5
05_01_0123 - 846081-846167,846264-846404,846749-846866,847382-84... 28 6.0
01_01_0484 - 3558941-3559303,3559439-3559560,3560596-3560743,356... 28 6.0
12_02_0586 + 20831933-20832378,20832434-20833031,20833813-208339... 28 7.9
07_03_1510 + 27264999-27265371,27265485-27265546,27265768-272664... 28 7.9
01_01_1176 - 9372879-9373097,9373814-9374278,9374372-9375447,937... 28 7.9
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 499 WSTLYPLTHNDDLREQYLKELGNIRRWSDAIGGAKSVQEAVRQWGGS 639
WST PL H DL E+ ++ + W D G + + E VR+ G+
Sbjct: 38 WSTSSPLHHLPDLLEEESVQVNEMELWGDDDGRRRMMGEEVRRQAGA 84
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +1
Query: 409 LKSSLEHVNGLLEGHQYVLGDKISAADISIWSTLYPLTHNDDLREQYLKELGNIRRWSDA 588
LK +LE L +Y+ GD IS ADIS + T+Y L + L+ ++ W D
Sbjct: 140 LKKALEVYEAQLSKSKYLAGDFISLADISHFPTVYYLLAS--AHASVLEAYPRVKAWIDD 197
Query: 589 IGGAKSVQE 615
+ SV++
Sbjct: 198 VMQRPSVKK 206
>10_06_0131 -
11066033-11066251,11066548-11067012,11067102-11068177,
11068269-11068422,11068511-11068601,11069016-11069152
Length = 713
Score = 31.9 bits (69), Expect = 0.48
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 430 VNGLLEGHQYVLGDKISAADISIWSTLYPLTHN-DDLREQYLKELGNIRRWSDAI 591
V+G L +++G ++ ADI++WS L + + LR+ K+ N+ RW + I
Sbjct: 100 VDGYLMSRTFLVGHVLTIADITVWSNLAGIGQRWESLRKS--KKYQNLVRWFNGI 152
>04_03_0013 +
9393423-9393747,9396577-9396657,9397491-9397594,
9397777-9397832,9398713-9398807,9400900-9401067,
9401181-9401341
Length = 329
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +1
Query: 442 LEGHQYVLGDKISAADISIWSTLYP---LTHNDDLREQYLKELGN-IRRWSDAIGGAKSV 609
L+G ++ G K + AD++++ L P LT D+ E ++G+ +R DAIG +
Sbjct: 270 LDGRDFLGGSKPNLADLAVFGVLRPIRYLTAGKDMVEH--TQIGDWYQRMEDAIGEPSRI 327
Query: 610 QE 615
QE
Sbjct: 328 QE 329
>01_06_1694 +
39246262-39247320,39247464-39247590,39248638-39248783,
39248898-39248965,39249055-39249157,39249616-39249741
Length = 542
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -3
Query: 369 GT*GRLKASSLPFLKLLALSILGHVQNREQIL-DRRIAGKEP 247
GT GR+KA ++ L+AL L H NRE++ + AG+EP
Sbjct: 206 GTTGRVKAVAITHRNLIALMSL-HADNREKVAREAAEAGEEP 246
>03_01_0248 -
1932992-1933423,1933440-1933489,1933558-1933606,
1933688-1933840
Length = 227
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/90 (20%), Positives = 45/90 (50%)
Frame = +1
Query: 355 PSLSAALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAADISIWSTLYPLTHNDD 534
P L+ + ++ ++ L+ L + +L ++Y+ GD+ + AD+S + + ++
Sbjct: 129 PHLNIPQDHAVIAENEKKLQQVLNVYDEILSKNEYLAGDEFTLADLSHLPNSHYIVSSER 188
Query: 535 LREQYLKELGNIRRWSDAIGGAKSVQEAVR 624
R+ + N+ RW D I ++ ++ V+
Sbjct: 189 GRKLFTGR-KNVARWYDQISKRETWKQVVK 217
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 29.9 bits (64), Expect = 2.0
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 26/174 (14%)
Frame = +1
Query: 214 QLPLLEVDPELRFFSSNAAVQYLF-----PILDMSENGQCQQ---LQEW---EATR---- 348
++P+LE D +L + S A +Y+F L + E G ++ + W EA +
Sbjct: 54 EIPVLE-DGDLTLYQSRAIARYIFRKYKPEFLGLGEGGSLEESAMVDVWLDVEAHQHEAA 112
Query: 349 LQPSL-SAALGKSPASDVKQ-VLKSS---LEHVNGLLE----GHQYVLGDKISAADISIW 501
++P L + K D Q V+ S LE V G+ E G +Y+ GD+IS AD+S +
Sbjct: 113 VRPILWHCIINKFEGRDRDQGVVDESVRKLEKVLGVYEARLSGSRYLAGDRISLADLSHF 172
Query: 502 STL--YPLTHNDDLREQYLKELGNIRRWSDAIGGAKSVQEAVRQWGGSPTGPFG 657
S + + T + + Y +++ W +A+ +VQ+ + G P FG
Sbjct: 173 SNMRYFMATEYAGVVDAY----PHVKAWWEALLARPTVQKVMA--GMPPDFGFG 220
>03_01_0247 - 1929000-1929475,1929566-1929614,1929732-1929884
Length = 225
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/97 (18%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +1
Query: 355 PSLSAALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAADIS-IWSTLYPLTHND 531
P L+ ++ ++ ++ L+ L + +L ++Y+ GD+ + AD+S + ++ Y +
Sbjct: 125 PQLNIPADEARIAENERKLQQMLNVYDEILAKNKYLAGDEFTLADLSHLPNSHYIVNARS 184
Query: 532 DLREQYLKELGNIRRWSDAIGGAKSVQEAVRQWGGSP 642
++ ++ RW + I S ++ V+ P
Sbjct: 185 PRGKKLFTSKKHVARWYEEISNRASWKQVVKMQSEHP 221
>03_06_0748 - 35971065-35971268,35972022-35972597
Length = 259
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 473 LSPRTYWWPSNNPLTCSSDDFKTCFTSEAGDFPSAALRDG 354
LSP+ W ++ PL D +TC F +A LR G
Sbjct: 64 LSPQLRWEEAHEPLHNGIDSNRTCGVGPGMSFANALLRSG 103
>03_05_1096 - 30364144-30365310,30365825-30365971,30366087-30366393,
30366541-30366849,30367544-30370567,30370640-30372290,
30372373-30373463,30373544-30373646,30373737-30374439,
30374654-30375783,30375913-30376027,30376504-30376695,
30377443-30377616,30378438-30378494,30378581-30378716,
30378842-30378927,30379023-30379092,30379993-30380021,
30380444-30380456,30380762-30381006
Length = 3582
Score = 29.1 bits (62), Expect = 3.4
Identities = 39/133 (29%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Frame = +1
Query: 250 FFSSNAAVQYLFPILDMS-ENGQCQQLQEWEATRLQPSLS----AALGKSPASDVKQV-- 408
+ S+ + YL + S EN + Q Q A RL S+ +A GKS SDVK++
Sbjct: 3061 YSSAGIVLFYLLRLPPFSMENQKLQGGQFDHADRLFNSVKDTWVSAAGKSNTSDVKELIP 3120
Query: 409 ----LKSSLEHVNGLLEGHQYVLGDKISAADISIW----STLYPLTHNDDLREQYLKELG 564
L LE+ L G + G+K+ + W S + H + L Y+ E
Sbjct: 3121 EFYYLPEFLENQFNLDLGEKQ-SGEKVGDVVLPPWAKGSSREFIRKHREALESDYVSE-- 3177
Query: 565 NIRRWSDAIGGAK 603
N+ W D I G K
Sbjct: 3178 NLHHWIDLIFGYK 3190
>11_01_0530 -
4164590-4165264,4165378-4165467,4167482-4168011,
4168094-4168603,4172207-4172432
Length = 676
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 406 VLKSSLEHVNGLLEGHQYVLGDKISAADISIWSTLYPLTHNDDLREQYLK 555
V + L+ VNG+L+ H ++SA +++ H++ +RE YL+
Sbjct: 66 VAQGHLDQVNGVLQRHGQCNISEVSAESNTVFHVAAEQGHDELIREVYLR 115
>09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821
Length = 576
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 322 QLQEWEATRLQPSLSAALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAADIS 495
QL+E+E +L + L + D K+ + E GL + + VLGDK+ +S
Sbjct: 251 QLKEFEGKKLVSATKEGLKLDESEDEKKRQEELKEKFEGLCKVIKEVLGDKVEKVVVS 308
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 322 QLQEWEATRLQPSLSAALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAADIS 495
QL+E+E +L + L + D K+ + E GL + + VLGDK+ +S
Sbjct: 505 QLKEFEGKKLVSATKEGLKLDESEDEKKRQEELKEKFEGLCKVIKEVLGDKVEKVVVS 562
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 322 QLQEWEATRLQPSLSAALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAADIS 495
QL+E+E +L + L + D K+ + E GL + + VLGDK+ +S
Sbjct: 505 QLKEFEGKKLVSATKEGLKLDESEDEKKRQEELKEKFEGLCKVIKEVLGDKVEKVVVS 562
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 322 QLQEWEATRLQPSLSAALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAADIS 495
QL+E+E +L + L + D K+ + E GL + + VLGDK+ +S
Sbjct: 505 QLKEFEGKKLVSATKEGLKLDESEDEKKRKEELKEKFEGLCKVIKEVLGDKVEKVVVS 562
>06_01_0897 -
6903294-6903401,6903781-6903855,6904239-6904379,
6904496-6904646,6905035-6905178,6905276-6905366,
6906071-6906308
Length = 315
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 379 KSPASDVKQVLKSSLEHVNGLLEGH-QYVLGDKISAADISIWSTLY 513
K P +Q L S L + L+ + ++ G+ ISAAD+S+ LY
Sbjct: 184 KDPNDGTEQALLSELTSFDSYLKDNGPFINGETISAADLSLAPKLY 229
>05_01_0123 -
846081-846167,846264-846404,846749-846866,847382-847528,
848439-848441,848590-848627,848808-848851,848959-849016
Length = 211
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 379 KSPASDVKQVLKSSLEHVNGLLEGH-QYVLGDKISAADISIWSTLYPL 519
K P ++ L + L+ + L+ H ++ G ISAAD+S+ LY L
Sbjct: 112 KDPNDGSEKALLTELQALEEHLKAHGPFINGQNISAADLSLAPKLYHL 159
>01_01_0484 - 3558941-3559303,3559439-3559560,3560596-3560743,
3560853-3561491,3562154-3562450,3562553-3563407,
3564363-3564545,3565041-3565118,3565762-3565974,
3566075-3566238,3566357-3566445,3566761-3566891,
3566980-3567148,3567255-3567327,3567525-3567606,
3567677-3567808,3568743-3568818,3568965-3569065,
3569446-3569636,3569738-3569912,3570604-3570854,
3571327-3571603,3572184-3572267,3572496-3573206
Length = 1867
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 205 GPRQLPLLEVDPELRFFSS-NAAVQYLFPILDMSENGQCQQLQEWEA 342
G R+ + +V E FS +Q L P+L + ++GQ + ++EW A
Sbjct: 1593 GIRECLVEDVSEESSGFSCIKKCIQSLSPLLSLHKDGQPEFIEEWSA 1639
>12_02_0586 +
20831933-20832378,20832434-20833031,20833813-20833986,
20834208-20834570
Length = 526
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -2
Query: 490 CRPLRFCPRERIGGLPTIR*RVQATTSRLALRQKLG 383
C LR +GGLPT+R AT L LR G
Sbjct: 209 CPRLRRLRLSHVGGLPTLRLDAAATLEELHLRHLTG 244
>07_03_1510 +
27264999-27265371,27265485-27265546,27265768-27266436,
27266842-27267288
Length = 516
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -3
Query: 357 RLKASSLPFLKLLALSILGHVQNREQILDRRIAGKEP*FWVDLEERQLTGPCEYIVFKL 181
R K S PFL ILG + Q L R +AG +D + RQ G + ++ +L
Sbjct: 283 RYKISKHPFLLRNLAEILGDSSSNNQELRRLMAGILRNLAIDKDTRQEIGQMKMLITRL 341
>01_01_1176 -
9372879-9373097,9373814-9374278,9374372-9375447,
9375534-9375687,9375783-9375879,9376238-9376374
Length = 715
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +1
Query: 412 KSSLEHVNGLLEGHQYVLGDKISAADISIWSTLYPLTHN-DDLREQYLKELGNIRRWSDA 588
+++ ++G L +++ +S ADI +WS L + LR K+ N+ RW ++
Sbjct: 96 EAACSFLDGYLASRTFLVSYGLSIADIVVWSNLAGTGQRWESLRRS--KKYQNLVRWFNS 153
Query: 589 IGG-AKSVQEAVRQWGG 636
I + ++ E V + G
Sbjct: 154 IADYSDTLDEVVSAYVG 170
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,689,022
Number of Sequences: 37544
Number of extensions: 402448
Number of successful extensions: 1157
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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