Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24n09
(308 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB209127-1|BAD92364.1| 400|Homo sapiens liver phosphofructokina... 29 2.1
BC009973-1|AAH09973.1| 650|Homo sapiens dihydrouridine synthase... 29 2.8
BC008362-1|AAH08362.1| 613|Homo sapiens DUS3L protein protein. 29 2.8
BC004549-1|AAH04549.1| 408|Homo sapiens DUS3L protein protein. 29 2.8
AY496232-1|AAS77218.1| 211|Homo sapiens truncated alpha-1,4-gal... 29 2.8
AL365411-1|CAB96955.1| 465|Homo sapiens hypothetical protein, s... 29 2.8
AK023958-1|BAB14740.1| 650|Homo sapiens protein ( Homo sapiens ... 29 2.8
AF091072-1|AAC72941.1| 223|Homo sapiens unknown protein. 29 2.8
Z71621-1|CAA96283.1| 372|Homo sapiens Wnt-13 protein. 28 6.4
U17760-1|AAC51352.1| 1172|Homo sapiens laminin S B3 chain protein. 28 6.4
D37766-1|BAA22263.1| 1172|Homo sapiens Laminin-5 beta3 chain pro... 28 6.4
BC141825-1|AAI41826.1| 391|Homo sapiens wingless-type MMTV inte... 28 6.4
BC075838-1|AAH75838.1| 1172|Homo sapiens laminin, beta 3 protein. 28 6.4
AY035783-1|AAK61364.1| 1172|Homo sapiens laminin 5 beta 3 subuni... 28 6.4
AL354760-5|CAI22311.1| 299|Homo sapiens wingless-type MMTV inte... 28 6.4
AL354760-4|CAI22310.1| 391|Homo sapiens wingless-type MMTV inte... 28 6.4
AL354760-3|CAI22309.1| 372|Homo sapiens wingless-type MMTV inte... 28 6.4
AL109932-11|CAI22710.1| 299|Homo sapiens wingless-type MMTV int... 28 6.4
AL109932-10|CAI22709.1| 391|Homo sapiens wingless-type MMTV int... 28 6.4
AL109932-7|CAI22706.1| 372|Homo sapiens wingless-type MMTV inte... 28 6.4
AL031316-2|CAI20062.1| 1172|Homo sapiens laminin, beta 3 protein. 28 6.4
AL023754-1|CAI19989.1| 1172|Homo sapiens laminin, beta 3 protein. 28 6.4
AF028701-1|AAC39552.1| 117|Homo sapiens Wnt-like protein Wnt13 ... 28 6.4
AB045117-1|BAB11985.1| 391|Homo sapiens WNT-2B Isoform 2 protein. 28 6.4
AB045116-1|BAB11984.1| 372|Homo sapiens WNT-2B Isoform 1 protein. 28 6.4
>AB209127-1|BAD92364.1| 400|Homo sapiens liver phosphofructokinase
isoform a variant protein.
Length = 400
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 295 CRCKRWVCRSSXHMTRFTNDSNELVYSLWMFMIGQPPP 182
C C W CR+ +TR + S E ++++ + Q PP
Sbjct: 11 CGCTPWRCRAVHGVTRIPSRSFENNWNIYKLLAHQKPP 48
>BC009973-1|AAH09973.1| 650|Homo sapiens dihydrouridine synthase
3-like (S. cerevisiae) protein.
Length = 650
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 120 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIHSEY 221
R VE +V +N I L KKGGGC +MN +++
Sbjct: 383 RTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKF 417
>BC008362-1|AAH08362.1| 613|Homo sapiens DUS3L protein protein.
Length = 613
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 120 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIHSEY 221
R VE +V +N I L KKGGGC +MN +++
Sbjct: 346 RTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKF 380
>BC004549-1|AAH04549.1| 408|Homo sapiens DUS3L protein protein.
Length = 408
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 120 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIHSEY 221
R VE +V +N I L KKGGGC +MN +++
Sbjct: 141 RTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKF 175
>AY496232-1|AAS77218.1| 211|Homo sapiens truncated
alpha-1,4-galactosyltransferase protein.
Length = 211
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 63 TCSTCWGVWV*GWRRGTRPSP 1
TC TCW W G GT P P
Sbjct: 144 TCWTCWNSWTCGSCSGTHPWP 164
>AL365411-1|CAB96955.1| 465|Homo sapiens hypothetical protein,
similar to (AF091072.1) predicted protein [Homo sapiens]
protein.
Length = 465
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 120 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIHSEY 221
R VE +V +N I L KKGGGC +MN +++
Sbjct: 366 RTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKF 400
>AK023958-1|BAB14740.1| 650|Homo sapiens protein ( Homo sapiens
cDNA FLJ13896 fis, clone THYRO1001703, weakly similar to
NIFR3-LIKE PROTEIN. ).
Length = 650
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 120 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIHSEY 221
R VE +V +N I L KKGGGC +MN +++
Sbjct: 383 RTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKF 417
>AF091072-1|AAC72941.1| 223|Homo sapiens unknown protein.
Length = 223
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 120 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIHSEY 221
R VE +V +N I L KKGGGC +MN +++
Sbjct: 7 RTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKF 41
>Z71621-1|CAA96283.1| 372|Homo sapiens Wnt-13 protein.
Length = 372
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 306 GRVCADVNDGF--VEVLPI*RGSQTTRTSWCTRCGC 205
GRVC+ + G E++ RG TTR + T+C C
Sbjct: 303 GRVCSKTSKGTDGCEIMCCGRGYDTTRVTRVTQCEC 338
>U17760-1|AAC51352.1| 1172|Homo sapiens laminin S B3 chain protein.
Length = 1172
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 222 CTRCGCS*LGSRRPF*PD*FCIRCSC-PRRMAPQ 124
C RC C+ LGSRR D RC C P + P+
Sbjct: 428 CHRCDCNILGSRRDMPCDEESGRCLCLPNVVGPK 461
>D37766-1|BAA22263.1| 1172|Homo sapiens Laminin-5 beta3 chain
protein.
Length = 1172
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 222 CTRCGCS*LGSRRPF*PD*FCIRCSC-PRRMAPQ 124
C RC C+ LGSRR D RC C P + P+
Sbjct: 428 CHRCDCNILGSRRDMPCDEESGRCLCLPNVVGPK 461
>BC141825-1|AAI41826.1| 391|Homo sapiens wingless-type MMTV
integration site family, member 2B protein.
Length = 391
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 306 GRVCADVNDGF--VEVLPI*RGSQTTRTSWCTRCGC 205
GRVC+ + G E++ RG TTR + T+C C
Sbjct: 322 GRVCSKTSKGTDGCEIMCCGRGYDTTRVTRVTQCEC 357
>BC075838-1|AAH75838.1| 1172|Homo sapiens laminin, beta 3 protein.
Length = 1172
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 222 CTRCGCS*LGSRRPF*PD*FCIRCSC-PRRMAPQ 124
C RC C+ LGSRR D RC C P + P+
Sbjct: 428 CHRCDCNILGSRRDMPCDEESGRCLCLPNVVGPK 461
>AY035783-1|AAK61364.1| 1172|Homo sapiens laminin 5 beta 3 subunit
protein.
Length = 1172
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 222 CTRCGCS*LGSRRPF*PD*FCIRCSC-PRRMAPQ 124
C RC C+ LGSRR D RC C P + P+
Sbjct: 428 CHRCDCNILGSRRDMPCDEESGRCLCLPNVVGPK 461
>AL354760-5|CAI22311.1| 299|Homo sapiens wingless-type MMTV
integration site family, member 2B protein.
Length = 299
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 306 GRVCADVNDGF--VEVLPI*RGSQTTRTSWCTRCGC 205
GRVC+ + G E++ RG TTR + T+C C
Sbjct: 230 GRVCSKTSKGTDGCEIMCCGRGYDTTRVTRVTQCEC 265
>AL354760-4|CAI22310.1| 391|Homo sapiens wingless-type MMTV
integration site family, member 2B protein.
Length = 391
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 306 GRVCADVNDGF--VEVLPI*RGSQTTRTSWCTRCGC 205
GRVC+ + G E++ RG TTR + T+C C
Sbjct: 322 GRVCSKTSKGTDGCEIMCCGRGYDTTRVTRVTQCEC 357
>AL354760-3|CAI22309.1| 372|Homo sapiens wingless-type MMTV
integration site family, member 2B protein.
Length = 372
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 306 GRVCADVNDGF--VEVLPI*RGSQTTRTSWCTRCGC 205
GRVC+ + G E++ RG TTR + T+C C
Sbjct: 303 GRVCSKTSKGTDGCEIMCCGRGYDTTRVTRVTQCEC 338
>AL109932-11|CAI22710.1| 299|Homo sapiens wingless-type MMTV
integration site family, member 2B protein.
Length = 299
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 306 GRVCADVNDGF--VEVLPI*RGSQTTRTSWCTRCGC 205
GRVC+ + G E++ RG TTR + T+C C
Sbjct: 230 GRVCSKTSKGTDGCEIMCCGRGYDTTRVTRVTQCEC 265
>AL109932-10|CAI22709.1| 391|Homo sapiens wingless-type MMTV
integration site family, member 2B protein.
Length = 391
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 306 GRVCADVNDGF--VEVLPI*RGSQTTRTSWCTRCGC 205
GRVC+ + G E++ RG TTR + T+C C
Sbjct: 322 GRVCSKTSKGTDGCEIMCCGRGYDTTRVTRVTQCEC 357
>AL109932-7|CAI22706.1| 372|Homo sapiens wingless-type MMTV
integration site family, member 2B protein.
Length = 372
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 306 GRVCADVNDGF--VEVLPI*RGSQTTRTSWCTRCGC 205
GRVC+ + G E++ RG TTR + T+C C
Sbjct: 303 GRVCSKTSKGTDGCEIMCCGRGYDTTRVTRVTQCEC 338
>AL031316-2|CAI20062.1| 1172|Homo sapiens laminin, beta 3 protein.
Length = 1172
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 222 CTRCGCS*LGSRRPF*PD*FCIRCSC-PRRMAPQ 124
C RC C+ LGSRR D RC C P + P+
Sbjct: 428 CHRCDCNILGSRRDMPCDEESGRCLCLPNVVGPK 461
>AL023754-1|CAI19989.1| 1172|Homo sapiens laminin, beta 3 protein.
Length = 1172
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 222 CTRCGCS*LGSRRPF*PD*FCIRCSC-PRRMAPQ 124
C RC C+ LGSRR D RC C P + P+
Sbjct: 428 CHRCDCNILGSRRDMPCDEESGRCLCLPNVVGPK 461
>AF028701-1|AAC39552.1| 117|Homo sapiens Wnt-like protein Wnt13
protein.
Length = 117
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 306 GRVCADVNDGF--VEVLPI*RGSQTTRTSWCTRCGC 205
GRVC+ + G E++ RG TTR + T+C C
Sbjct: 80 GRVCSKTSKGTDGCEIMCCGRGYDTTRVTRVTQCEC 115
>AB045117-1|BAB11985.1| 391|Homo sapiens WNT-2B Isoform 2 protein.
Length = 391
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 306 GRVCADVNDGF--VEVLPI*RGSQTTRTSWCTRCGC 205
GRVC+ + G E++ RG TTR + T+C C
Sbjct: 322 GRVCSKTSKGTDGCEIMCCGRGYDTTRVTRVTQCEC 357
>AB045116-1|BAB11984.1| 372|Homo sapiens WNT-2B Isoform 1 protein.
Length = 372
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 306 GRVCADVNDGF--VEVLPI*RGSQTTRTSWCTRCGC 205
GRVC+ + G E++ RG TTR + T+C C
Sbjct: 303 GRVCSKTSKGTDGCEIMCCGRGYDTTRVTRVTQCEC 338
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,711,278
Number of Sequences: 237096
Number of extensions: 1001372
Number of successful extensions: 3099
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3098
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1400773776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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