Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24n09
(308 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81485-2|CAB03974.2| 708|Caenorhabditis elegans Hypothetical pr... 31 0.16
AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical... 31 0.22
Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical pr... 28 1.2
AF067613-14|ABA54416.1| 395|Caenorhabditis elegans Hypothetical... 28 1.2
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 1.5
U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical pr... 28 1.5
U39666-3|AAA80410.2| 178|Caenorhabditis elegans Hypothetical pr... 27 2.0
AL110477-5|CAB54329.1| 314|Caenorhabditis elegans Hypothetical ... 27 2.0
Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical pr... 27 2.7
Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical pr... 27 3.5
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 27 3.5
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 26 4.7
U23520-3|AAC46555.2| 470|Caenorhabditis elegans Hypothetical pr... 26 4.7
U23520-2|AAR25655.1| 485|Caenorhabditis elegans Hypothetical pr... 26 4.7
Z49911-6|CAA90132.1| 831|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z83113-2|CAB05544.1| 479|Caenorhabditis elegans Hypothetical pr... 25 8.1
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 25 8.1
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 25 8.1
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 25 8.1
AF078788-1|AAC26965.2| 629|Caenorhabditis elegans Hypothetical ... 25 8.1
AC006729-5|AAK84599.2| 568|Caenorhabditis elegans Hypothetical ... 25 8.1
AB259784-1|BAF48662.1| 323|Caenorhabditis elegans ROG-1 protein. 25 8.1
>Z81485-2|CAB03974.2| 708|Caenorhabditis elegans Hypothetical
protein C49F5.2 protein.
Length = 708
Score = 31.1 bits (67), Expect = 0.16
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -2
Query: 307 RQSLCRCKRWVCRSSXHMTRFTNDSNELVYSLWM 206
R+ C C+ + CRS H +F+N +L+ S ++
Sbjct: 606 RRQRCLCRTFACRSGPHYEKFSNLDGKLIASCFV 639
>AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical
protein Y38H6C.17 protein.
Length = 454
Score = 30.7 bits (66), Expect = 0.22
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 229 ELVYSLWMFMIGQPPPFLARLILYSLFMP 143
E + +W F+ G PPPF +++ F+P
Sbjct: 151 EHIIEIWQFIAGSPPPFSKIVLILMYFVP 179
>Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical
protein C03E10.5 protein.
Length = 623
Score = 28.3 bits (60), Expect = 1.2
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 10 TCTSSPTSNPHAPTGATSSSLNTLLGGKKTT-CPTK*SELWSHPT 141
T TS+PTS + T A ++ + TT CPTK HPT
Sbjct: 192 TTTSTPTSEATSTTTAMITTTSGTTENPTTTDCPTKVCRYGFHPT 236
>AF067613-14|ABA54416.1| 395|Caenorhabditis elegans Hypothetical
protein F56D6.15 protein.
Length = 395
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 7 WTCTSSPTSNPHA--PTGATSSSLNTLLGGKKT 99
+ C+ PT P A PT T++++N LGG++T
Sbjct: 116 FVCSYDPTVQPKATTPTTTTAANVNCPLGGQQT 148
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 10 TCTSSPTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHPTWA*TTNT 162
T T++PT+ PT T+ + T TT PT ++ + PT TT T
Sbjct: 229 TTTTTPTTTTTTPTTTTTPATTT--SETTTTTPTTTTQTTTKPTTTTTTPT 277
>U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical
protein F37A4.4 protein.
Length = 1163
Score = 27.9 bits (59), Expect = 1.5
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -2
Query: 247 FTNDSNELVYSLWMFMIGQPPPFLARLILYSLFMPT*DGSTILITS 110
FT++ +L+++ G+ + R YSLFM DG +LI S
Sbjct: 787 FTSNGRNQYINLYLYYFGKTSDYEKRW-RYSLFMDRVDGKNVLIDS 831
>U39666-3|AAA80410.2| 178|Caenorhabditis elegans Hypothetical
protein K04E7.1 protein.
Length = 178
Score = 27.5 bits (58), Expect = 2.0
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 182 LFSQTNSVFVVHAHVGWLHNSDYFVGHVVFFPPKSVLSEELVAPVGACG 36
L++ + V+V ++ WLH S G+V FP + L LV CG
Sbjct: 45 LYAVSFVVYVTNSICSWLHISFVVKGYVTSFPLNTWLVVSLVV-TAVCG 92
>AL110477-5|CAB54329.1| 314|Caenorhabditis elegans Hypothetical
protein Y113G7B.7 protein.
Length = 314
Score = 27.5 bits (58), Expect = 2.0
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 93 EDYVPHEVIRIVEPSYVGMNN 155
+D + EV+R+ +PSY+G +N
Sbjct: 268 DDEIEPEVVRLFDPSYIGNDN 288
>Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical
protein W09G3.6 protein.
Length = 1125
Score = 27.1 bits (57), Expect = 2.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 16 TSSPTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHP 138
TSSPTS+ + P T +L T G + PT +W++P
Sbjct: 724 TSSPTSSNNVPKSDTDYTLTT---GSEGPTPTS-EHIWTNP 760
>Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical
protein H32K16.1 protein.
Length = 481
Score = 26.6 bits (56), Expect = 3.5
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 229 ELVYSLWMFMIGQPPPFLARLILYSLFMP 143
E V +W F PPPF +++ F+P
Sbjct: 179 EHVIEIWEFFADSPPPFSKCVMILMYFVP 207
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 26.6 bits (56), Expect = 3.5
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 10 TCTSSPTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHPT 141
T TS P+S+P T + SSS T + TT K S L S T
Sbjct: 1988 TQTSLPSSSPSPSTHSVSSSEGTTMSSGATTSGDKMSFLSSTGT 2031
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 26.2 bits (55), Expect = 4.7
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +1
Query: 10 TCTSSPTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHPTWA*TT 156
T T++PT+ APT T++S T KTT T ++ + T A TT
Sbjct: 307 TSTTTPTTTTTAPTTTTTASTTTF----KTTTITTTTQTTTPTTTATTT 351
>U23520-3|AAC46555.2| 470|Caenorhabditis elegans Hypothetical
protein C35B8.3a protein.
Length = 470
Score = 26.2 bits (55), Expect = 4.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 15 YLVANLKPTRPNRCYKFLAQHALRWEEDYVPHEVIRIV 128
+L+ L+ R + C K L LRWE+ + P +I+ V
Sbjct: 392 HLINELEFAR-DECIKELKLTGLRWEQAFTPEALIQCV 428
>U23520-2|AAR25655.1| 485|Caenorhabditis elegans Hypothetical
protein C35B8.3b protein.
Length = 485
Score = 26.2 bits (55), Expect = 4.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 15 YLVANLKPTRPNRCYKFLAQHALRWEEDYVPHEVIRIV 128
+L+ L+ R + C K L LRWE+ + P +I+ V
Sbjct: 407 HLINELEFAR-DECIKELKLTGLRWEQAFTPEALIQCV 443
>Z49911-6|CAA90132.1| 831|Caenorhabditis elegans Hypothetical
protein M28.8 protein.
Length = 831
Score = 25.8 bits (54), Expect = 6.2
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 82 LGGKKTTC-PTK*SELWSHPTWA*TTNTE 165
LGGKK PT+ ELW+ P + T+NTE
Sbjct: 721 LGGKKDQVRPTE--ELWATPILSSTSNTE 747
>Z83113-2|CAB05544.1| 479|Caenorhabditis elegans Hypothetical
protein K08H10.4 protein.
Length = 479
Score = 25.4 bits (53), Expect = 8.1
Identities = 18/81 (22%), Positives = 31/81 (38%)
Frame = -1
Query: 245 HKRLERVGVLAVDVHDWAAAALFSQTNSVFVVHAHVGWLHNSDYFVGHVVFFPPKSVLSE 66
HK V A D+ + + N V HVG+ + D+F H+ F + +
Sbjct: 195 HKPAAHRSVAAFDLGGGSTQLTYWPNNEA-VFSEHVGYERDIDFFGHHIRLFTHSFLGNG 253
Query: 65 ELVAPVGACGFEVGDEVHVHH 3
+ A + E +E+ H
Sbjct: 254 LIAARLNILQLETDNEIESTH 274
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 25.4 bits (53), Expect = 8.1
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 125 NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFEVGD 21
NS YFVGH F F +S ++++A V A + G+
Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGE 1513
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 25.4 bits (53), Expect = 8.1
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 125 NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFEVGD 21
NS YFVGH F F +S ++++A V A + G+
Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGE 1513
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 25.4 bits (53), Expect = 8.1
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 125 NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFEVGD 21
NS YFVGH F F +S ++++A V A + G+
Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGE 1513
>AF078788-1|AAC26965.2| 629|Caenorhabditis elegans Hypothetical
protein ZC190.4 protein.
Length = 629
Score = 25.4 bits (53), Expect = 8.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 110 RSNQNCGAILRGHEQRIQN 166
R+N+ G L GH+Q IQN
Sbjct: 140 RNNRGNGGHLNGHQQNIQN 158
>AC006729-5|AAK84599.2| 568|Caenorhabditis elegans Hypothetical
protein Y24D9A.2 protein.
Length = 568
Score = 25.4 bits (53), Expect = 8.1
Identities = 9/29 (31%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -2
Query: 295 CRCKRWVCRSSXHMTRFTN-DSNELVYSL 212
CRC+ + CR H+ + N ++ +L + L
Sbjct: 514 CRCRTFACRRGEHVKTYKNFETAQLAHCL 542
>AB259784-1|BAF48662.1| 323|Caenorhabditis elegans ROG-1 protein.
Length = 323
Score = 25.4 bits (53), Expect = 8.1
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +3
Query: 102 VPHEVIRIVEPSYVGMNNEYRISLAKKGGGCPIMNIHSEYTNSFESFVNRV 254
+P V R + GMN+E S G + HS + +SF+ R+
Sbjct: 205 MPSSVQRFRSEVFAGMNSEVLTSSMNSSGFNDSIGYHSYHRSSFDPRSGRI 255
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,594,426
Number of Sequences: 27780
Number of extensions: 151197
Number of successful extensions: 491
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 333802358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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