Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24m18
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016425-4|AAB65339.1| 518|Caenorhabditis elegans Hypothetical ... 83 2e-16
U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical pr... 79 2e-15
Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical pr... 79 4e-15
Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical p... 79 4e-15
AL110471-3|CAB63308.1| 818|Caenorhabditis elegans Hypothetical ... 66 2e-11
AL034364-6|CAA22254.2| 818|Caenorhabditis elegans Hypothetical ... 66 2e-11
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 65 6e-11
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 65 6e-11
Z81089-1|CAB03135.2| 957|Caenorhabditis elegans Hypothetical pr... 64 8e-11
AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical ... 60 1e-09
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U00032-5|AAA50636.2| 1009|Caenorhabditis elegans Yeast isw (imit... 60 2e-09
Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical pr... 59 4e-09
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 56 3e-08
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 52 3e-07
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 52 3e-07
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 52 3e-07
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 52 6e-07
Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical pr... 49 3e-06
AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical ... 49 3e-06
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 48 9e-06
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 48 9e-06
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 48 9e-06
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 46 2e-05
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 46 2e-05
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical p... 41 0.001
U41534-10|AAK68177.1| 687|Caenorhabditis elegans Hypothetical p... 41 0.001
U41534-9|AAM22029.1| 690|Caenorhabditis elegans Hypothetical pr... 41 0.001
AL110477-9|CAB54333.1| 540|Caenorhabditis elegans Hypothetical ... 39 0.004
Z68220-5|CAA92490.2| 282|Caenorhabditis elegans Hypothetical pr... 35 0.053
U97003-4|AAB52268.2| 370|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL023847-8|CAI46616.1| 262|Caenorhabditis elegans Hypothetical ... 30 2.0
U58730-1|AAC48058.1| 514|Caenorhabditis elegans Inward rectifyi... 29 4.6
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z92804-1|CAB07252.1| 338|Caenorhabditis elegans Hypothetical pr... 28 8.0
AL021175-2|CAA15966.1| 322|Caenorhabditis elegans Hypothetical ... 28 8.0
>AF016425-4|AAB65339.1| 518|Caenorhabditis elegans Hypothetical
protein F59A7.8 protein.
Length = 518
Score = 83.0 bits (196), Expect = 2e-16
Identities = 37/74 (50%), Positives = 54/74 (72%)
Frame = +2
Query: 8 GGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYIKQ 187
GGVGLNLIGGNH++M++ HWNP +E QA DRI RMGQ K ++++++ E +IE+ +
Sbjct: 418 GGVGLNLIGGNHLIMVDLHWNPALEQQACDRIYRMGQKKEVHIHRLIVKE--TIEQRVMS 475
Query: 188 RQDKKIAFVNTVFE 229
Q+KK+A +V E
Sbjct: 476 LQEKKLALAASVLE 489
>U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical protein
T23H2.3 protein.
Length = 1009
Score = 79.4 bits (187), Expect = 2e-15
Identities = 39/83 (46%), Positives = 55/83 (66%), Gaps = 7/83 (8%)
Frame = +2
Query: 8 GGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVE-------DNS 166
GGVGLNLIGGNH++M++ HWNP +E QA DRI RMGQ K ++++ LN+ +
Sbjct: 902 GGVGLNLIGGNHLIMVDLHWNPALEQQACDRIYRMGQKKEVFIHR-LNISKFCRLIVKGT 960
Query: 167 IEKYIKQRQDKKIAFVNTVFEET 235
IE+ + Q+KK+A +V E T
Sbjct: 961 IEQRVMDLQEKKLALAASVLEGT 983
>Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical protein
F54E12.2 protein.
Length = 1091
Score = 78.6 bits (185), Expect = 4e-15
Identities = 35/74 (47%), Positives = 52/74 (70%)
Frame = +2
Query: 8 GGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYIKQ 187
GGVGLNL GGNH+VM++ HWNP +E QA DRI RMGQ K+ +++++ V +IE+ +
Sbjct: 996 GGVGLNLTGGNHLVMVDLHWNPALEQQAFDRIYRMGQKKDVFIHRL--VTKGTIEQRVVM 1053
Query: 188 RQDKKIAFVNTVFE 229
Q K+A ++V +
Sbjct: 1054 LQKDKVALASSVLD 1067
>Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 78.6 bits (185), Expect = 4e-15
Identities = 35/74 (47%), Positives = 52/74 (70%)
Frame = +2
Query: 8 GGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYIKQ 187
GGVGLNL GGNH+VM++ HWNP +E QA DRI RMGQ K+ +++++ V +IE+ +
Sbjct: 996 GGVGLNLTGGNHLVMVDLHWNPALEQQAFDRIYRMGQKKDVFIHRL--VTKGTIEQRVVM 1053
Query: 188 RQDKKIAFVNTVFE 229
Q K+A ++V +
Sbjct: 1054 LQKDKVALASSVLD 1067
>AL110471-3|CAB63308.1| 818|Caenorhabditis elegans Hypothetical
protein W06D4.6 protein.
Length = 818
Score = 66.1 bits (154), Expect = 2e-11
Identities = 37/90 (41%), Positives = 52/90 (57%)
Frame = +2
Query: 2 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYI 181
K GG GLNLIG N +VM +P WNP + QA R+ R GQ K ++Y++L SIE+ +
Sbjct: 625 KAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKMCFIYRLL--ATGSIEEKM 682
Query: 182 KQRQDKKIAFVNTVFEETLINYEDIKKFFN 271
QRQ K A + V + ED+ + F+
Sbjct: 683 FQRQTHKKALSSCVVDAG----EDVARHFS 708
>AL034364-6|CAA22254.2| 818|Caenorhabditis elegans Hypothetical
protein W06D4.6 protein.
Length = 818
Score = 66.1 bits (154), Expect = 2e-11
Identities = 37/90 (41%), Positives = 52/90 (57%)
Frame = +2
Query: 2 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYI 181
K GG GLNLIG N +VM +P WNP + QA R+ R GQ K ++Y++L SIE+ +
Sbjct: 625 KAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKMCFIYRLL--ATGSIEEKM 682
Query: 182 KQRQDKKIAFVNTVFEETLINYEDIKKFFN 271
QRQ K A + V + ED+ + F+
Sbjct: 683 FQRQTHKKALSSCVVDAG----EDVARHFS 708
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 64.9 bits (151), Expect = 6e-11
Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Frame = +2
Query: 2 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLN---VEDNSIE 172
+ GGVG+NL G + ++ + WNP ++ QAQDR R+GQT+N +Y++++ +E+N +
Sbjct: 1264 RSGGVGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRNVSIYRLISERTIEENILR 1323
Query: 173 KYIKQRQDKKIAFVNTVFEETLINYED-IKKFFN 271
K ++R+ ++A F D I+ F+
Sbjct: 1324 KATQKRRLGELAIDEAGFTPEFFKQSDSIRDLFD 1357
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 64.9 bits (151), Expect = 6e-11
Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Frame = +2
Query: 2 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLN---VEDNSIE 172
+ GGVG+NL G + ++ + WNP ++ QAQDR R+GQT+N +Y++++ +E+N +
Sbjct: 1264 RSGGVGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRNVSIYRLISERTIEENILR 1323
Query: 173 KYIKQRQDKKIAFVNTVFEETLINYED-IKKFFN 271
K ++R+ ++A F D I+ F+
Sbjct: 1324 KATQKRRLGELAIDEAGFTPEFFKQSDSIRDLFD 1357
>Z81089-1|CAB03135.2| 957|Caenorhabditis elegans Hypothetical
protein F53H4.1 protein.
Length = 957
Score = 64.5 bits (150), Expect = 8e-11
Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Frame = +2
Query: 2 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIE--K 175
+ GG+GLNL N +++ +P WNPQ + QA++RI RMGQT + +Y++ V + +IE K
Sbjct: 598 RAGGLGLNLTCANKVIIFDPDWNPQADNQAKNRIYRMGQTNDVAIYRL--VSNGTIEDLK 655
Query: 176 YIKQRQDKKIA 208
+ KQ Q + +A
Sbjct: 656 FFKQVQKENLA 666
>AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical
protein Y116A8C.13 protein.
Length = 833
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +2
Query: 2 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYI 181
K GGVGLNLIG + +V+ + WNP + QA RI R GQ + ++Y+++ +IE+ +
Sbjct: 594 KAGGVGLNLIGASRLVLFDSDWNPANDQQAMARIWRDGQVRPCHIYRLITT--GTIEEKM 651
Query: 182 KQRQDKK 202
QRQ KK
Sbjct: 652 LQRQIKK 658
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical protein
H06O01.2 protein.
Length = 1461
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/76 (34%), Positives = 46/76 (60%)
Frame = +2
Query: 2 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYI 181
+ GG+G+NL + +++ + WNPQ +LQA R R+GQTK +Y++ V S+E+ I
Sbjct: 788 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRL--VTKGSVEEEI 845
Query: 182 KQRQDKKIAFVNTVFE 229
+R +K+ + V +
Sbjct: 846 VERAKRKLVLDHLVIQ 861
>U00032-5|AAA50636.2| 1009|Caenorhabditis elegans Yeast isw
(imitation swi) homologprotein 1 protein.
Length = 1009
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/77 (31%), Positives = 49/77 (63%)
Frame = +2
Query: 2 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYI 181
+ GG+G+NL + +++ + WNPQ +LQA DR R+GQ K V+++ + +N++++ I
Sbjct: 512 RAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRL--ITENTVDERI 569
Query: 182 KQRQDKKIAFVNTVFEE 232
++ + K+ N V ++
Sbjct: 570 IEKAEAKLRLDNIVIQQ 586
>Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical protein
F15D4.1 protein.
Length = 1529
Score = 59.3 bits (137), Expect = 3e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +2
Query: 8 GGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKML 148
GGVGLNL G + ++ L+ WNP +LQA DR R+GQT+N VY+++
Sbjct: 1386 GGVGLNLTGADTVIFLDHDWNPMKDLQAIDRAHRLGQTRNVNVYRLI 1432
>Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical protein
F15D4.1 protein.
Length = 1529
Score = 59.3 bits (137), Expect = 3e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +2
Query: 8 GGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKML 148
GGVGLNL G + ++ L+ WNP +LQA DR R+GQT+N VY+++
Sbjct: 1386 GGVGLNLTGADTVIFLDHDWNPMKDLQAIDRAHRLGQTRNVNVYRLI 1432
>Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical protein
C27B7.4 protein.
Length = 1274
Score = 58.8 bits (136), Expect = 4e-09
Identities = 27/81 (33%), Positives = 47/81 (58%)
Frame = +2
Query: 2 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYI 181
+ G +G+NL+ N ++++ WNP + QA R+ R GQ K T+VY++ + DNS+E+ I
Sbjct: 867 RAGSLGINLVSANRCIIIDACWNPCHDAQAVCRVYRYGQQKKTFVYRL--IMDNSMERSI 924
Query: 182 KQRQDKKIAFVNTVFEETLIN 244
RQ K V ++ ++
Sbjct: 925 FNRQISKHGLQQRVVDDAQVD 945
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 55.6 bits (128), Expect = 3e-08
Identities = 25/78 (32%), Positives = 44/78 (56%)
Frame = +2
Query: 2 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYI 181
+ GG+G+NL + +++ + WNPQ +LQAQ R R+GQ K VY++ + N+ E+ +
Sbjct: 1588 RAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQKKLVKVYRL--ITSNTYEREM 1645
Query: 182 KQRQDKKIAFVNTVFEET 235
+ K+ V + T
Sbjct: 1646 FDKASLKLGLDKAVLQST 1663
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/60 (38%), Positives = 38/60 (63%)
Frame = +2
Query: 2 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYI 181
+ GG+GLNL + +++ + WNP ++QAQDR R+GQ K V +++ NS+E+ I
Sbjct: 927 RAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITA--NSVEEKI 984
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/60 (38%), Positives = 38/60 (63%)
Frame = +2
Query: 2 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYI 181
+ GG+GLNL + +++ + WNP ++QAQDR R+GQ K V +++ NS+E+ I
Sbjct: 927 RAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITA--NSVEEKI 984
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/60 (38%), Positives = 38/60 (63%)
Frame = +2
Query: 2 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYI 181
+ GG+GLNL + +++ + WNP ++QAQDR R+GQ K V +++ NS+E+ I
Sbjct: 927 RAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITA--NSVEEKI 984
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/80 (30%), Positives = 44/80 (55%)
Frame = +2
Query: 2 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYI 181
+ G +G N++ N +++ + WNP + Q+ R+ R GQTK Y+Y+ + ++E+ I
Sbjct: 1051 RAGSLGTNMVAANRVIIFDACWNPSHDTQSLFRVYRFGQTKPVYIYRF--IAQGTMEERI 1108
Query: 182 KQRQDKKIAFVNTVFEETLI 241
+RQ K + V +E I
Sbjct: 1109 YKRQVTKESTSMRVVDEAQI 1128
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/80 (30%), Positives = 44/80 (55%)
Frame = +2
Query: 2 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYI 181
+ G +G N++ N +++ + WNP + Q+ R+ R GQTK Y+Y+ + ++E+ I
Sbjct: 1051 RAGSLGTNMVAANRVIIFDACWNPSHDTQSLFRVYRFGQTKPVYIYRF--IAQGTMEERI 1108
Query: 182 KQRQDKKIAFVNTVFEETLI 241
+RQ K + V +E I
Sbjct: 1109 YKRQVTKESTSMRVVDEAQI 1128
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 51.6 bits (118), Expect = 6e-07
Identities = 22/60 (36%), Positives = 38/60 (63%)
Frame = +2
Query: 2 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYI 181
+ GG+GLNL + +++ + WNP ++QAQDR R+GQ V++++ NS+E+ I
Sbjct: 760 RAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKAEVRVFRLITA--NSVEEKI 817
>Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/50 (40%), Positives = 34/50 (68%)
Frame = +2
Query: 2 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLN 151
+ GG+G+NL NHI++ + +NP + QA+DR RMGQ K +V ++++
Sbjct: 829 RAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRMGQEKPVHVTRLVS 878
>AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/50 (40%), Positives = 34/50 (68%)
Frame = +2
Query: 2 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLN 151
+ GG+G+NL NHI++ + +NP + QA+DR RMGQ K +V ++++
Sbjct: 829 RAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRMGQEKPVHVTRLVS 878
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical protein
T14G8.1 protein.
Length = 1787
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/74 (29%), Positives = 39/74 (52%)
Frame = +2
Query: 2 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYI 181
+ GG+G+NL + +++ + WNP ++QA R R+GQ +Y+ V S+E+ I
Sbjct: 1017 RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRF--VTKGSVEERI 1074
Query: 182 KQRQDKKIAFVNTV 223
KK+ + V
Sbjct: 1075 TSVAKKKMLLTHLV 1088
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical protein
T14G8.1 protein.
Length = 1787
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/74 (29%), Positives = 39/74 (52%)
Frame = +2
Query: 2 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYI 181
+ GG+G+NL + +++ + WNP ++QA R R+GQ +Y+ V S+E+ I
Sbjct: 1017 RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRF--VTKGSVEERI 1074
Query: 182 KQRQDKKIAFVNTV 223
KK+ + V
Sbjct: 1075 TSVAKKKMLLTHLV 1088
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/74 (29%), Positives = 39/74 (52%)
Frame = +2
Query: 2 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYI 181
+ GG+G+NL + +++ + WNP ++QA R R+GQ +Y+ V S+E+ I
Sbjct: 1017 RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRF--VTKGSVEERI 1074
Query: 182 KQRQDKKIAFVNTV 223
KK+ + V
Sbjct: 1075 TSVAKKKMLLTHLV 1088
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 2 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYI 181
+ GG+G+NL + +++ + WNP ++QA R R+GQ +Y+ V S+E+ I
Sbjct: 1003 RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRF--VTKKSVEEKI 1060
Query: 182 KQRQDKKI 205
KK+
Sbjct: 1061 TSVAKKKM 1068
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 2 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYI 181
+ GG+G+NL + +++ + WNP ++QA R R+GQ +Y+ V S+E+ I
Sbjct: 1003 RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRF--VTKKSVEEKI 1060
Query: 182 KQRQDKKI 205
KK+
Sbjct: 1061 TSVAKKKM 1068
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical protein
T05A12.4a protein.
Length = 1622
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +2
Query: 17 GLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYIKQRQD 196
GLN+ G NHI+ L+P + QA RI+R GQ ++ VY +L D S++ +++
Sbjct: 1505 GLNMTGANHIIFLDPPHLQSVLNQAIGRINRFGQKRDMNVYHLL--VDGSLDIELRETAK 1562
Query: 197 K 199
K
Sbjct: 1563 K 1563
>U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical
protein C16A3.1b protein.
Length = 686
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +2
Query: 11 GVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKML--NVEDNSIEKYIK 184
GVG+ L + +V E H+NP +QA+DR R+GQ + +V ++ D+ + ++
Sbjct: 552 GVGITLTAASVVVFAEIHFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKTADDVMWNMVQ 611
Query: 185 QRQD 196
Q+ D
Sbjct: 612 QKLD 615
>U41534-10|AAK68177.1| 687|Caenorhabditis elegans Hypothetical
protein C16A3.1a protein.
Length = 687
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +2
Query: 11 GVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKML--NVEDNSIEKYIK 184
GVG+ L + +V E H+NP +QA+DR R+GQ + +V ++ D+ + ++
Sbjct: 553 GVGITLTAASVVVFAEIHFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKTADDVMWNMVQ 612
Query: 185 QRQD 196
Q+ D
Sbjct: 613 QKLD 616
>U41534-9|AAM22029.1| 690|Caenorhabditis elegans Hypothetical
protein C16A3.1c protein.
Length = 690
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +2
Query: 11 GVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKML--NVEDNSIEKYIK 184
GVG+ L + +V E H+NP +QA+DR R+GQ + +V ++ D+ + ++
Sbjct: 556 GVGITLTAASVVVFAEIHFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKTADDVMWNMVQ 615
Query: 185 QRQD 196
Q+ D
Sbjct: 616 QKLD 619
>AL110477-9|CAB54333.1| 540|Caenorhabditis elegans Hypothetical
protein Y113G7B.14 protein.
Length = 540
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 20 LNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVY--KMLNVEDNSIEKYIKQRQ 193
+NL G H+++L HWN +E +A + + Q ++ K+ ++ +EK +
Sbjct: 461 INLHGATHVILLGMHWNLALEQEACSCVCNIAQKNIVTIHRIKVAGTNEDDVEKAQDDKS 520
Query: 194 DKKIAFVNTVFEETLIN 244
D+ + + E T I+
Sbjct: 521 DRSVGAETPIRESTPIS 537
>Z68220-5|CAA92490.2| 282|Caenorhabditis elegans Hypothetical
protein T20D3.8 protein.
Length = 282
Score = 35.1 bits (77), Expect = 0.053
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -1
Query: 228 SKTVLTNAIFLSWRCLMYFSMLLSSTFSILYTYVFFVCPIRLI 100
S T+ S C+ FS+ LS F++L+ ++ F+CP+ LI
Sbjct: 217 SSTIFCFLSLFSIYCISDFSLELSICFALLHIFILFICPLILI 259
>U97003-4|AAB52268.2| 370|Caenorhabditis elegans Hypothetical
protein F47C10.3 protein.
Length = 370
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 298 PDTLLAMFATSWCTCLKKRLVTCRLRPLRFTNNVWPLLKTVLCC 429
PD LL MF+ + ++ RL T R R L+ ++ LL +L C
Sbjct: 242 PDRLLQMFSLDFLNNIRSRLAT-RFRELKVSSEEHMLLNLILFC 284
>AL023847-8|CAI46616.1| 262|Caenorhabditis elegans Hypothetical
protein Y57A10C.11 protein.
Length = 262
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -1
Query: 156 STFSILYTYVFFVCPIRLIRSCACNSICGFQ*GS-SITMWFPPIKFNP 16
++ ++YT +FFVC S +C + FQ +I W P + F P
Sbjct: 152 TSLQMIYTIIFFVCSQTYYISLSCMTYYPFQQEKIAIKFWSPTLLFCP 199
>U58730-1|AAC48058.1| 514|Caenorhabditis elegans Inward rectifying
k (potassium)channel family protein 2 protein.
Length = 514
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 219 VLTNAIFLSWR-CLMYFSMLLSSTFSILYTYVFFV 118
+ T I + WR CL+YFS+ ++S T F +
Sbjct: 108 IFTTVIEMKWRWCLLYFSLSFMISWSFFATVYFLI 142
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 658 CECPQSQLHVCCSAAP*TPCSRA 590
C C Q+ CS P TPCS A
Sbjct: 38 CSCQQASQQYSCSCQPSTPCSCA 60
>Z92804-1|CAB07252.1| 338|Caenorhabditis elegans Hypothetical
protein K05D4.2 protein.
Length = 338
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = -1
Query: 267 KNFLMSS*LIRVSSKTVLTNAIFLSWRCLMYFSMLLSSTFSILYTYVFFVCPIRLIR 97
++F++ S ++RV+ + + LS C + +L T Y Y+ CP +L+R
Sbjct: 73 RSFVIFS-VLRVTKLSKPVAEVGLSLMCASFGILLALLTIHFYYRYICVACPKKLLR 128
>AL021175-2|CAA15966.1| 322|Caenorhabditis elegans Hypothetical
protein Y6E2A.2 protein.
Length = 322
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = -1
Query: 240 IRVSSKTVLTNAIFLSWRCLMYFSMLLSSTFSILYTYVFFVCPIRLIRSCA 88
IR+S + + N L C Y ML T Y Y+ CP +L R A
Sbjct: 82 IRLSKRKTMMNV--LGMYCSCYGMMLSLLTIHFYYRYLSVTCPSQLSRFSA 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,969,760
Number of Sequences: 27780
Number of extensions: 356647
Number of successful extensions: 1123
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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