Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24m12
(608 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC046434-1|AAH46434.1| 658|Homo sapiens zinc finger protein 135... 31 3.2
AK098011-1|BAC05214.1| 390|Homo sapiens protein ( Homo sapiens ... 31 3.2
AK094202-1|BAC04309.1| 616|Homo sapiens protein ( Homo sapiens ... 31 3.2
AF235809-1|AAK13939.1| 73|Homo sapiens immunoglobulin heavy ch... 31 3.2
AK097556-1|BAC05100.1| 518|Homo sapiens protein ( Homo sapiens ... 30 5.5
BC062339-1|AAH62339.1| 458|Homo sapiens alkB, alkylation repair... 29 9.7
BC046124-1|AAH46124.2| 805|Homo sapiens RSF1 protein protein. 29 9.7
AK001268-1|BAA91591.1| 572|Homo sapiens protein ( Homo sapiens ... 29 9.7
AF380176-1|AAK57515.1| 1431|Homo sapiens HBV pX associated prote... 29 9.7
AF227948-1|AAF61709.2| 1189|Homo sapiens HBV pX associated prote... 29 9.7
>BC046434-1|AAH46434.1| 658|Homo sapiens zinc finger protein 135
protein.
Length = 658
Score = 31.1 bits (67), Expect = 3.2
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +1
Query: 430 DEEPKPRIVLTIRSEKSNAKNSNMKVVSTEEKQEEFCPRRSSRTRGKWEWVCDS 591
D E +P++ L++ + + + SN ++ + R T G WEW C+S
Sbjct: 86 DLETRPKVKLSVLKQGISEEISNSVILVERFLWDGLWYCRGEDTEGHWEWSCES 139
>AK098011-1|BAC05214.1| 390|Homo sapiens protein ( Homo sapiens
cDNA FLJ40692 fis, clone THYMU2024748, highly similar to
ZINC FINGER PROTEIN 135. ).
Length = 390
Score = 31.1 bits (67), Expect = 3.2
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +1
Query: 430 DEEPKPRIVLTIRSEKSNAKNSNMKVVSTEEKQEEFCPRRSSRTRGKWEWVCDS 591
D E +P++ L++ + + + SN ++ + R T G WEW C+S
Sbjct: 98 DLETRPKVKLSVLKQGISEEISNSVILVERFLWDGLWYCRGEDTEGHWEWSCES 151
>AK094202-1|BAC04309.1| 616|Homo sapiens protein ( Homo sapiens
cDNA FLJ36883 fis, clone BLADE2000389, highly similar to
ZINC FINGER PROTEIN 135. ).
Length = 616
Score = 31.1 bits (67), Expect = 3.2
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +1
Query: 430 DEEPKPRIVLTIRSEKSNAKNSNMKVVSTEEKQEEFCPRRSSRTRGKWEWVCDS 591
D E +P++ L++ + + + SN ++ + R T G WEW C+S
Sbjct: 44 DLETRPKVKLSVLKQGISEEISNSVILVERFLWDGLWYCRGEDTEGHWEWSCES 97
>AF235809-1|AAK13939.1| 73|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 73
Score = 31.1 bits (67), Expect = 3.2
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -2
Query: 553 WICEDRTLLVFLPWILPSYYYF 488
+ C +++L + W+LPSYYY+
Sbjct: 44 YYCATKSVLRYFDWLLPSYYYY 65
>AK097556-1|BAC05100.1| 518|Homo sapiens protein ( Homo sapiens
cDNA FLJ40237 fis, clone TESTI2023414. ).
Length = 518
Score = 30.3 bits (65), Expect = 5.5
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Frame = +1
Query: 313 LESNMNTETEPSPKKKTDKIT---DNLTVSLEKC----DIKKIEKSDEEPKPRIVLTIRS 471
LE N+ ++ P ++T+ +T D T LE D KI+K+ E P+PR ++ +
Sbjct: 8 LELNIGSQLGPKSPERTEGVTAFEDYGTGLLENQLSVGDFVKIQKAFESPQPRKIICMSR 67
Query: 472 EKSNAKNSNMKVVSTEEKQEEFCPRRSSRTRGKWEW 579
E K + + T+E+ E + G W
Sbjct: 68 EDFTQKMTEIVGWGTKEEYGELFDKVDVAQDGFINW 103
>BC062339-1|AAH62339.1| 458|Homo sapiens alkB, alkylation repair
homolog 5 (E. coli) protein.
Length = 458
Score = 29.5 bits (63), Expect = 9.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 382 GCL*FCLSFSLEMVRFPYSCCFQGLSKYQGQKM 284
G FC F L + FP+ CC GL GQ +
Sbjct: 409 GVFVFCFLFFLILYIFPWFCCLLGLKNRIGQDL 441
>BC046124-1|AAH46124.2| 805|Homo sapiens RSF1 protein protein.
Length = 805
Score = 29.5 bits (63), Expect = 9.7
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Frame = +1
Query: 316 ESNMNTETEPSPK--KKTDKITDNLTVSLEKCDIKKIEKSDE--EPKPRIVLTIRSE--K 477
++N+ SP+ + T K+ + + +K D K+ E DE E + T + E K
Sbjct: 569 KTNVGRTLRRSPRISRPTAKVAE---IRDQKADKKRGEGEDEVEEESTALQKTDKKEILK 625
Query: 478 SNAKNSNMKVVSTEEKQEEFCPRRSSRTRGKWEWVCDSDTSTS 606
+ K++N KV + K + SRTRG+W++ + ++ S
Sbjct: 626 KSEKDTNSKVSKVKPKGK--VRWTGSRTRGRWKYSSNDESEGS 666
>AK001268-1|BAA91591.1| 572|Homo sapiens protein ( Homo sapiens
cDNA FLJ10406 fis, clone NT2RM4000515. ).
Length = 572
Score = 29.5 bits (63), Expect = 9.7
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Frame = +1
Query: 316 ESNMNTETEPSPK--KKTDKITDNLTVSLEKCDIKKIEKSDE--EPKPRIVLTIRSE--K 477
++N+ SP+ + T K+ + + +K D K+ E DE E + T + E K
Sbjct: 272 KTNVGRTLRRSPRISRPTAKVAE---IRDQKADKKRGEGEDEVEEESTALQKTDKKEILK 328
Query: 478 SNAKNSNMKVVSTEEKQEEFCPRRSSRTRGKWEWVCDSDTSTS 606
+ K++N KV + K + SRTRG+W++ + ++ S
Sbjct: 329 KSEKDTNSKVSKVKPKGK--VRWTGSRTRGRWKYSSNDESEGS 369
>AF380176-1|AAK57515.1| 1431|Homo sapiens HBV pX associated protein 8
large isoform protein.
Length = 1431
Score = 29.5 bits (63), Expect = 9.7
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Frame = +1
Query: 316 ESNMNTETEPSPK--KKTDKITDNLTVSLEKCDIKKIEKSDE--EPKPRIVLTIRSE--K 477
++N+ SP+ + T K+ + + +K D K+ E DE E + T + E K
Sbjct: 758 KTNVGRTLRRSPRISRPTAKVAE---IRDQKADKKRGEGEDEVEEESTALQKTDKKEILK 814
Query: 478 SNAKNSNMKVVSTEEKQEEFCPRRSSRTRGKWEWVCDSDTSTS 606
+ K++N KV + K + SRTRG+W++ + ++ S
Sbjct: 815 KSEKDTNSKVSKVKPKGK--VRWTGSRTRGRWKYSSNDESEGS 855
>AF227948-1|AAF61709.2| 1189|Homo sapiens HBV pX associated
protein-8 protein.
Length = 1189
Score = 29.5 bits (63), Expect = 9.7
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Frame = +1
Query: 316 ESNMNTETEPSPK--KKTDKITDNLTVSLEKCDIKKIEKSDE--EPKPRIVLTIRSE--K 477
++N+ SP+ + T K+ + + +K D K+ E DE E + T + E K
Sbjct: 516 KTNVGRTLRRSPRISRPTAKVAE---IRDQKADKKRGEGEDEVEEESTALQKTDKKEILK 572
Query: 478 SNAKNSNMKVVSTEEKQEEFCPRRSSRTRGKWEWVCDSDTSTS 606
+ K++N KV + K + SRTRG+W++ + ++ S
Sbjct: 573 KSEKDTNSKVSKVKPKGK--VRWTGSRTRGRWKYSSNDESEGS 613
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,460,544
Number of Sequences: 237096
Number of extensions: 1797609
Number of successful extensions: 4872
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4850
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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