Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24m11
(720 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0110 + 8500204-8500460,8502544-8502612,8502725-8502790,850... 63 2e-10
08_01_0577 + 5132876-5132894,5134352-5134845,5134937-5135162,513... 59 4e-09
09_02_0312 - 7168332-7168408,7168492-7168621,7168793-7168861,716... 58 5e-09
01_01_0508 + 3710435-3710980,3711086-3711238,3711323-3711408,371... 51 2e-08
07_03_0649 - 20260501-20260512,20260620-20260833,20261207-202614... 54 2e-07
07_03_0644 - 20242283-20242294,20242402-20242615,20242989-202432... 54 2e-07
05_01_0502 + 4191443-4191769,4191770-4191892,4194161-4194313,419... 49 4e-06
08_02_0305 + 15586044-15586073,15586846-15586968,15587060-155872... 43 2e-04
04_04_1697 - 35454337-35454576,35454657-35454888,35455045-354552... 35 0.057
08_01_0035 - 262750-262962,263046-263277,263420-263627,263762-26... 33 0.17
11_06_0223 - 21419128-21419397,21419493-21419747,21420243-214204... 30 1.6
05_06_0102 - 25589011-25589181,25589269-25589496,25589589-255899... 30 1.6
05_01_0165 - 1139271-1139417,1139549-1139777,1139889-1139992,114... 30 2.1
04_01_0031 + 381389-381841 29 2.8
03_02_0650 + 10174905-10175000,10175321-10175376,10175467-101755... 29 2.8
03_02_0611 + 9842550-9843035,9844313-9844416,9844586-9844814,984... 29 2.8
02_05_0652 + 30649857-30649933,30650026-30650141,30650307-306503... 29 2.8
06_03_1006 + 26844161-26844198,26844304-26844372,26844526-268445... 29 4.9
01_01_0977 - 7717808-7717837,7718227-7718327,7718449-7718548,771... 29 4.9
09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351 28 6.5
08_02_1420 + 26942777-26942905,26944415-26944511,26944596-269449... 28 6.5
12_01_0654 - 5542349-5542480,5542491-5542666,5542835-5542937,554... 28 8.6
>05_03_0110 +
8500204-8500460,8502544-8502612,8502725-8502790,
8502885-8502963,8504270-8504390,8504486-8504581,
8505403-8505515,8505612-8505689,8507777-8507893,
8508194-8508293,8508463-8508563,8509093-8509110
Length = 404
Score = 63.3 bits (147), Expect = 2e-10
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 1/176 (0%)
Frame = +2
Query: 14 RRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXXXXXXXXXXXGVR 193
R L+ GF WY L+ N++ K P+P +V G+
Sbjct: 96 RYPALVTGFFFFMWYFLNVIFNILNKKIFDYFPYPY-FVSVSHLLVGVLYCLVGWSFGLP 154
Query: 194 STRWPTNYWT-RVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFG 370
R P N ++L P+A+ + + S VS V VS+AHT+KA P + A ++ + G
Sbjct: 155 K-RAPINSTVLKLLFPVAVCHAIGHVTSTVSFAAVAVSFAHTIKALEPFFNAAASQFILG 213
Query: 371 ERVSRXXXXXXXXXXXXXXXXSLTELQFDXXXXXXXXXXXXXXXXQHLYSKRALQD 538
++V SLTEL F+ + +YSK+A+ D
Sbjct: 214 QQVPLTLWLSLAPVVIGVSMASLTELSFNWTGFVNAMISNISFTLRSVYSKKAMTD 269
>08_01_0577 +
5132876-5132894,5134352-5134845,5134937-5135162,
5135695-5135917,5136315-5136528,5136769-5136806,
5136977-5137142
Length = 459
Score = 58.8 bits (136), Expect = 4e-09
Identities = 37/176 (21%), Positives = 72/176 (40%)
Frame = +2
Query: 20 ETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXXXXXXXXXXXGVRST 199
+ L + A W+ L+ N+ K L P+P + + V +
Sbjct: 100 QKLKISIYFATWWALNVIFNIYNKKVLNAFPYPWLTSTLSLACGSAMMLVSWATRLVEAP 159
Query: 200 RWPTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERV 379
+ ++W +VL P+A+A + + + VS+ KV VS+ H +K+ P ++ ++R L GE
Sbjct: 160 KTDLDFW-KVLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSAEPAFSVLVSRFLLGETF 218
Query: 380 SRXXXXXXXXXXXXXXXXSLTELQFDXXXXXXXXXXXXXXXXQHLYSKRALQDSGV 547
++TEL F+ ++++SKR ++ V
Sbjct: 219 PVPVYLSLLPIIGGCALAAVTELNFNMVGFMGAMISNLAFVFRNIFSKRGMKGKSV 274
>09_02_0312 -
7168332-7168408,7168492-7168621,7168793-7168861,
7168947-7169066,7169356-7169440,7169565-7169650,
7169762-7169914,7170008-7170130,7170974-7171357
Length = 408
Score = 58.4 bits (135), Expect = 5e-09
Identities = 38/150 (25%), Positives = 63/150 (42%)
Frame = +2
Query: 8 GSRRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXXXXXXXXXXXG 187
G +TL +G L WY+ + N+ K L P+P+ +T VQ G
Sbjct: 100 GGLAKTLQLGALFGLWYLFNIYFNIYNKQVLKVFPYPINITNVQFAVGTVIALFMWIT-G 158
Query: 188 VRSTRWPTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLF 367
+ + ++PLA+ + L + +S+ KV VS+ HT+KA P ++ L+ +
Sbjct: 159 ILKRPKISGAQLAAILPLAMVHTMGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSALFL 218
Query: 368 GERVSRXXXXXXXXXXXXXXXXSLTELQFD 457
GE + SLTE F+
Sbjct: 219 GEMPTPFVVLSLVPIVGGVALASLTEASFN 248
>01_01_0508 +
3710435-3710980,3711086-3711238,3711323-3711408,
3711533-3711617,3711705-3711824,3711906-3711974,
3712088-3712217,3712336-3712406
Length = 419
Score = 51.2 bits (117), Expect(2) = 2e-08
Identities = 36/120 (30%), Positives = 52/120 (43%)
Frame = +2
Query: 98 LTELPFPLTMTAVQXXXXXXXXXXXXXXXGVRSTRWPTNYWTRVLVPLAIAKLLTTLCSQ 277
L LPFP T+TA Q + R + ++ PLA +L T+ +
Sbjct: 143 LQPLPFPYTITAFQLAFGSFVIFLMWALKLHPAPRISISQLAKI-APLAAGHMLGTVFTN 201
Query: 278 VSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVSRXXXXXXXXXXXXXXXXSLTELQFD 457
+S+ KV VS+ HT+KA+ P +T L+ GE S SLTEL F+
Sbjct: 202 MSLSKVAVSFTHTIKASEPFFTVLLSAFFLGETPSLLVLGSLVPIVGGVALASLTELSFN 261
Score = 25.0 bits (52), Expect(2) = 2e-08
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 8 GSRRETLIVGFLCAAWYMLSSASNVVGK 91
G+ ET +G + AWY+L+ N+ K
Sbjct: 87 GALAETAQLGAMIVAWYLLNIYFNIYNK 114
>07_03_0649 -
20260501-20260512,20260620-20260833,20261207-20261429,
20261706-20261931,20262051-20262494
Length = 372
Score = 53.6 bits (123), Expect = 2e-07
Identities = 34/172 (19%), Positives = 67/172 (38%)
Frame = +2
Query: 32 VGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXXXXXXXXXXXGVRSTRWPT 211
+G A W+ L+ N+ K L P+P + + +
Sbjct: 81 IGVYFATWWALNVIFNIYNKKVLNAFPYPWLTSTLSLAAGSAIMLASWATRIAEAPATDL 140
Query: 212 NYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVSRXX 391
++W + L P+AIA + + + VS+ KV VS+ H +K+ P ++ ++R GE
Sbjct: 141 DFW-KALSPVAIAHTIGHVAATVSMAKVAVSFTHIIKSGEPAFSVLVSRFFLGEHFPAPV 199
Query: 392 XXXXXXXXXXXXXXSLTELQFDXXXXXXXXXXXXXXXXQHLYSKRALQDSGV 547
++TEL F+ ++++SK+ ++ V
Sbjct: 200 YFSLLPIIGGCALAAITELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSV 251
>07_03_0644 -
20242283-20242294,20242402-20242615,20242989-20243211,
20243488-20243713,20243833-20244276
Length = 372
Score = 53.6 bits (123), Expect = 2e-07
Identities = 34/172 (19%), Positives = 67/172 (38%)
Frame = +2
Query: 32 VGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXXXXXXXXXXXGVRSTRWPT 211
+G A W+ L+ N+ K L P+P + + +
Sbjct: 81 IGVYFATWWALNVIFNIYNKKVLNAFPYPWLTSTLSLAAGSAIMLASWATRIAEAPATDL 140
Query: 212 NYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVSRXX 391
++W + L P+AIA + + + VS+ KV VS+ H +K+ P ++ ++R GE
Sbjct: 141 DFW-KALSPVAIAHTIGHVAATVSMAKVAVSFTHIIKSGEPAFSVLVSRFFLGEHFPAPV 199
Query: 392 XXXXXXXXXXXXXXSLTELQFDXXXXXXXXXXXXXXXXQHLYSKRALQDSGV 547
++TEL F+ ++++SK+ ++ V
Sbjct: 200 YFSLLPIIGGCALAAITELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSV 251
>05_01_0502 +
4191443-4191769,4191770-4191892,4194161-4194313,
4194420-4194505,4194648-4194732,4194871-4194990,
4195066-4195134,4195351-4195506
Length = 372
Score = 48.8 bits (111), Expect = 4e-06
Identities = 35/151 (23%), Positives = 60/151 (39%)
Frame = +2
Query: 86 GKLALTELPFPLTMTAVQXXXXXXXXXXXXXXXGVRSTRWPTNYWTRVLVPLAIAKLLTT 265
G L +PFP T+T Q R + ++L PLA+ +
Sbjct: 107 GLQVLKSVPFPYTITTFQFASGSFFITLMWLLNLHPKPRLSLGQYAKIL-PLALVHTMGN 165
Query: 266 LCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVSRXXXXXXXXXXXXXXXXSLTE 445
+ + +S+ KV VS+ HT+KA P ++ L+ + GE S S+TE
Sbjct: 166 VFTNMSLGKVAVSFTHTIKAMEPFFSVLLSVLFLGETPSFLVLGSLVPIVGGVVLASMTE 225
Query: 446 LQFDXXXXXXXXXXXXXXXXQHLYSKRALQD 538
+ F+ ++++SK+ L D
Sbjct: 226 VSFNWIGFWSAMASNLTNQSRNVFSKKLLAD 256
>08_02_0305 +
15586044-15586073,15586846-15586968,15587060-15587212,
15587313-15587398,15588327-15588411,15588796-15588864,
15589261-15589326
Length = 203
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/122 (24%), Positives = 50/122 (40%)
Frame = +2
Query: 92 LALTELPFPLTMTAVQXXXXXXXXXXXXXXXGVRSTRWPTNYWTRVLVPLAIAKLLTTLC 271
+ L P+P+ +T VQ +R + +L PLA+ + L
Sbjct: 10 MVLKVFPYPINITTVQFAVGTVVALFMWITGILRRPKISGAQLFAIL-PLAVVHTMGNLF 68
Query: 272 SQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVSRXXXXXXXXXXXXXXXXSLTELQ 451
+ +S+ KV VS+ HT+KA P ++ L+ + GE + SLTE
Sbjct: 69 TNMSLGKVAVSFTHTIKAMEPFFSVLLSAIFLGELPTVWVILSLLPIVGGVALASLTEAS 128
Query: 452 FD 457
F+
Sbjct: 129 FN 130
>04_04_1697 -
35454337-35454576,35454657-35454888,35455045-35455252,
35455380-35455629,35456232-35456354
Length = 350
Score = 35.1 bits (77), Expect = 0.057
Identities = 20/84 (23%), Positives = 37/84 (44%)
Frame = +2
Query: 206 PTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVSR 385
P + W R+ P++ + + VS+ +PVS+ T+K+ TP T L +++ +
Sbjct: 80 PEDRWRRIF-PMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVILQWLVWSKHFEW 138
Query: 386 XXXXXXXXXXXXXXXXSLTELQFD 457
S+TEL F+
Sbjct: 139 RIWASLVPIVGGILLTSITELSFN 162
>08_01_0035 -
262750-262962,263046-263277,263420-263627,263762-264011,
265232-265342
Length = 337
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/84 (23%), Positives = 37/84 (44%)
Frame = +2
Query: 206 PTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVSR 385
P + W R+ P++ + + VS+ +PVS+ T+K+ TP T L +++ +
Sbjct: 76 PEDRWRRIF-PMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVILQWLVWRKYFEW 134
Query: 386 XXXXXXXXXXXXXXXXSLTELQFD 457
S+TEL F+
Sbjct: 135 RIWASLVPIVGGIMLTSITELSFN 158
>11_06_0223 -
21419128-21419397,21419493-21419747,21420243-21420414,
21420530-21420757,21420916-21421049,21421309-21421392,
21421554-21421760,21421871-21422203,21422343-21422449,
21422823-21422988,21423127-21423230,21423347-21423507,
21423595-21424495,21424642-21424732,21424837-21425127,
21425491-21425575,21425665-21425747,21427653-21427773,
21427785-21428260
Length = 1422
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 275 QVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVS 382
Q++I K+PV Y H P WT G+A +L VS
Sbjct: 625 QLTIKKLPVFYKHRDFLFFPAWTFGVANILLKVPVS 660
>05_06_0102 -
25589011-25589181,25589269-25589496,25589589-25589933,
25590406-25590777,25590957-25591049,25591150-25591401,
25592019-25593224
Length = 888
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -1
Query: 357 RASPAVQRGVVAFTVWA*ETGTFQMETCEHSVVRSLAIAKGTKTRVQ*FVGHR 199
R P GV AF W+ ++ +F + +C+ R L + KG + FVGHR
Sbjct: 136 RTIPGFAAGVTAFD-WSPDS-SFLLASCKDLTARLLPVKKGLGGKPFLFVGHR 186
>05_01_0165 -
1139271-1139417,1139549-1139777,1139889-1139992,
1140097-1140639
Length = 340
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 260 TTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGER 376
+ + VS+ +PVS+ V ATTP +TA LA + R
Sbjct: 122 SVVAGNVSLRYLPVSFNQAVGATTPFFTAVLAYAVAARR 160
>04_01_0031 + 381389-381841
Length = 150
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -1
Query: 660 RFHATWARSTAPASRTNHNGAIGTSARPDNVASSRKWCTPESCSARFEY 514
R H +W R P RT+ G T P R+WCTP + + R E+
Sbjct: 42 RRHGSWGR--LPLPRTD--GRTRTGVPPPRTRE-RRWCTPRTSTLRREW 85
>03_02_0650 +
10174905-10175000,10175321-10175376,10175467-10175540,
10176215-10176753,10176845-10177186,10177520-10177879,
10177982-10178193,10178881-10179169,10179469-10180152
Length = 883
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = +1
Query: 121 NYDSGTAVCSGLAECTRASPVWSTFDAMADELLDPCLSTLGDRQTSYHTVLASFHLESAS 300
NY+SG AV L + + S STFD A + D L R+ Y +E A
Sbjct: 500 NYNSGNAVAYALLDGNKQSAFLSTFDKSAFKSSDKLLLAYKPRRGRYAVYDNEVTMEEAE 559
Query: 301 LL 306
L
Sbjct: 560 SL 561
>03_02_0611 +
9842550-9843035,9844313-9844416,9844586-9844814,
9846121-9846270
Length = 322
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 260 TTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVS 382
+ + VS+ +PVS+ V ATTP +TA A ++ +R S
Sbjct: 103 SVVSGNVSLRYLPVSFNQAVGATTPFFTAVFAYIMTVKRES 143
>02_05_0652 +
30649857-30649933,30650026-30650141,30650307-30650392,
30650511-30650605,30650774-30650899,30651009-30651162
Length = 217
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 633 TAPASRTNHNGAIGTSARPDNVASSR 556
T+ S T NGA+GT RP+N +SR
Sbjct: 75 TSRFSATVINGALGTKTRPENATASR 100
>06_03_1006 +
26844161-26844198,26844304-26844372,26844526-26844591,
26844831-26844902,26844982-26845053,26846179-26846244,
26846409-26846881,26846966-26847324,26847429-26847697,
26847780-26847918,26848323-26848462,26848612-26848768,
26848925-26848978,26849457-26849539,26851085-26851136
Length = 702
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -1
Query: 636 STAPASRTNHNGAIGTSARPDNVASSRK 553
S+AP SRT N + G + R DN++SS+K
Sbjct: 188 SSAPPSRTPSNSSDGPTTR-DNISSSKK 214
>01_01_0977 -
7717808-7717837,7718227-7718327,7718449-7718548,
7718706-7718822,7718913-7718990,7719980-7720058,
7720184-7720249,7720373-7720441,7720890-7721188
Length = 312
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 26 LIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAV 136
LI GF WY L+ N++ K P+P ++ +
Sbjct: 114 LITGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVI 150
>09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351
Length = 415
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = -1
Query: 198 VERTPHRASAGTLSEAAAHSCTAVIVSGNGSSVNASLPTTLLAELNIYHAAHRKPTISVS 19
+E TP R S+G + A+ + A GSS+ SL + HR + S
Sbjct: 281 IELTPERRSSGVKRQLASGTSLAKKPRSQGSSITCSLCKVTMTSPRAL-VEHRASLLHRS 339
Query: 18 RLEPL 4
L PL
Sbjct: 340 NLAPL 344
>08_02_1420 +
26942777-26942905,26944415-26944511,26944596-26944962,
26945286-26945793
Length = 366
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 250 QTSYHTVLASFHLESASLLCPH 315
QTSYHTV + S+SL+CP+
Sbjct: 73 QTSYHTVGDHSNAASSSLVCPY 94
>12_01_0654 -
5542349-5542480,5542491-5542666,5542835-5542937,
5542971-5543084,5543104-5543163,5543258-5544316
Length = 547
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +1
Query: 109 TISTNYDSGTAVCSGLAECTRASPVWSTFDAMADEL 216
++STN+++ T + + T + P + T+DA+ + L
Sbjct: 262 SVSTNFNAETLISKIIQSVTLSKPSFDTYDALQEHL 297
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,396,486
Number of Sequences: 37544
Number of extensions: 282986
Number of successful extensions: 982
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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