Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24m11
         (720 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    24   4.1  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    24   4.1  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    24   5.4  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    23   7.2  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   9.5  
AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding pr...    23   9.5  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   9.5  

>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = +1

Query: 82  RGQTGINRATISTNYDSGTAVCSGLAECTRASPVWSTFDAMADELL 219
           RG   +  + ++  Y    AVCS   E       W    A ADELL
Sbjct: 434 RGNIHLVPSKVNDVYFLRMAVCSRFTEPADIDYSWKEVAAAADELL 479


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = +1

Query: 82  RGQTGINRATISTNYDSGTAVCSGLAECTRASPVWSTFDAMADELL 219
           RG   +  + ++  Y    AVCS   E       W    A ADELL
Sbjct: 465 RGNIHLVPSKVNDVYFLRMAVCSRFTEPADIDYSWKEVAAAADELL 510


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 367 KQYASQPRRPERSRRFHCVGIG 302
           K  A+ P  PER R F C+ +G
Sbjct: 494 KVRAAPPTPPERQRCFRCLEMG 515


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = -1

Query: 651 ATWARSTAPASRTNHNGAIGTSARPDNVASSRKWCTP 541
           +T  R T     T H  A  TS  PD   +S + C P
Sbjct: 313 STEHRYTTRTPTTTHRLAARTSTPPDPETTSSQQCHP 349


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 237 PWRSPNFLPHC 269
           P ++PN LPHC
Sbjct: 953 PVKAPNVLPHC 963


>AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding
           protein AgamOBP52 protein.
          Length = 170

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 237 PWRSPNFLPHCARKFPFGKCQSPMP 311
           P+R P F     ++FP  K QS +P
Sbjct: 9   PFRCPLFFSKHPKQFPPSKKQSELP 33


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 285 METCEHSVVRSLAIAKGTKTRVQ 217
           ++ C+H ++R    AKGT   +Q
Sbjct: 63  VDDCQHPLIRDCKTAKGTWDALQ 85


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,065
Number of Sequences: 2352
Number of extensions: 10433
Number of successful extensions: 70
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)