Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24m11
         (720 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003539-1|AAO39543.1|  373|Drosophila melanogaster RE05288p pro...   161   7e-40
AE014298-3170|AAF50956.1|  373|Drosophila melanogaster CG14621-P...   161   7e-40
D83477-1|BAA11923.1| 1367|Drosophila melanogaster TamA protein.        30   2.8  
AY128453-1|AAM75046.1| 1149|Drosophila melanogaster LP05923p pro...    30   2.8  
AY119641-1|AAM50295.1|  581|Drosophila melanogaster RE44178p pro...    30   2.8  
AY051965-1|AAK93389.1|  974|Drosophila melanogaster LD43161p pro...    30   2.8  
AF195242-1|AAF63250.1|  581|Drosophila melanogaster FRIZZLED 3 p...    30   2.8  
AE014298-105|AAF45547.1|  581|Drosophila melanogaster CG16785-PA...    30   2.8  
AE014297-836|AAF54303.3| 1167|Drosophila melanogaster CG31349-PE...    30   2.8  
AE014297-835|AAN13402.2| 1149|Drosophila melanogaster CG31349-PF...    30   2.8  
AE014297-834|AAF54300.3| 1371|Drosophila melanogaster CG31349-PB...    30   2.8  
AE014297-833|AAN13403.2| 1293|Drosophila melanogaster CG31349-PC...    30   2.8  
AE014297-832|AAF54301.3| 2090|Drosophila melanogaster CG31349-PA...    30   2.8  
AB018565-1|BAA84677.1|  581|Drosophila melanogaster Dfrizzled-3 ...    30   2.8  
AE014134-908|AAF52239.3| 2267|Drosophila melanogaster CG14023-PA...    29   4.8  
AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p pro...    29   8.4  

>BT003539-1|AAO39543.1|  373|Drosophila melanogaster RE05288p
           protein.
          Length = 373

 Score =  161 bits (392), Expect = 7e-40
 Identities = 89/242 (36%), Positives = 126/242 (52%), Gaps = 4/242 (1%)
 Frame = +2

Query: 5   SGSRRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXXXXXXXXXXX 184
           +GSR   +++  +C  WY++SS++NV+GK+ L E PFP+T+T VQ               
Sbjct: 6   TGSRHIAVVL-LMCLFWYVISSSNNVIGKMVLNEFPFPMTVTLVQLCSITLYSGPFFNLW 64

Query: 185 GVRSTR-WPTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARV 361
            +R  +  P  Y+ R++VPLA+ KLL ++ S +S+WKVPVSYAHTVKAT PL+T  L RV
Sbjct: 65  RIRKYQDIPRPYYYRLIVPLALGKLLASVTSHISLWKVPVSYAHTVKATMPLFTVVLTRV 124

Query: 362 LFGERVSRXXXXXXXXXXXXXXXXSLTELQFDXXXXXXXXXXXXXXXXQHLYSKRALQDS 541
            FGE+                   ++TE+ FD                Q+++SK+ L+D+
Sbjct: 125 FFGEKQPTLVYLSLLPIITGVGIATVTEISFDMMGLISALISTMGFSMQNIFSKKVLKDT 184

Query: 542 GVHHXXXXXXXXXXXXVPMAPLWLVRDAGAVLRAQVAWN---RAGPLLLADGVLAWLQAV 712
            +HH                PLWL  D+ AV R     N   R   LL ADGVL WLQ +
Sbjct: 185 NIHHLRLLHLLGKLSLFIFLPLWLYMDSFAVFRHTAIKNLDYRVIALLFADGVLNWLQNI 244

Query: 713 AA 718
            A
Sbjct: 245 IA 246


>AE014298-3170|AAF50956.1|  373|Drosophila melanogaster CG14621-PA
           protein.
          Length = 373

 Score =  161 bits (392), Expect = 7e-40
 Identities = 89/242 (36%), Positives = 126/242 (52%), Gaps = 4/242 (1%)
 Frame = +2

Query: 5   SGSRRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXXXXXXXXXXX 184
           +GSR   +++  +C  WY++SS++NV+GK+ L E PFP+T+T VQ               
Sbjct: 6   TGSRHIAVVL-LMCLFWYVISSSNNVIGKMVLNEFPFPMTVTLVQLCSITLYSGPFFNLW 64

Query: 185 GVRSTR-WPTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARV 361
            +R  +  P  Y+ R++VPLA+ KLL ++ S +S+WKVPVSYAHTVKAT PL+T  L RV
Sbjct: 65  RIRKYQDIPRPYYYRLIVPLALGKLLASVTSHISLWKVPVSYAHTVKATMPLFTVVLTRV 124

Query: 362 LFGERVSRXXXXXXXXXXXXXXXXSLTELQFDXXXXXXXXXXXXXXXXQHLYSKRALQDS 541
            FGE+                   ++TE+ FD                Q+++SK+ L+D+
Sbjct: 125 FFGEKQPTLVYLSLLPIITGVGIATVTEISFDMMGLISALISTMGFSMQNIFSKKVLKDT 184

Query: 542 GVHHXXXXXXXXXXXXVPMAPLWLVRDAGAVLRAQVAWN---RAGPLLLADGVLAWLQAV 712
            +HH                PLWL  D+ AV R     N   R   LL ADGVL WLQ +
Sbjct: 185 NIHHLRLLHLLGKLSLFIFLPLWLYMDSFAVFRHTAIKNLDYRVIALLFADGVLNWLQNI 244

Query: 713 AA 718
            A
Sbjct: 245 IA 246


>D83477-1|BAA11923.1| 1367|Drosophila melanogaster TamA protein.
          Length = 1367

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 22/75 (29%), Positives = 37/75 (49%)
 Frame = -1

Query: 285 METCEHSVVRSLAIAKGTKTRVQ*FVGHRVERTPHRASAGTLSEAAAHSCTAVIVSGNGS 106
           +E  E++   ++ + + +   VQ  V  RV   P  A AG +    +HS ++V +  NGS
Sbjct: 83  LENVEYAT--AVQVLRDSGNTVQLVVKRRVPLNPINA-AGAVQHQHSHSLSSVGLMANGS 139

Query: 105 SVNASLPTTLLAELN 61
              A  P T L++ N
Sbjct: 140 GGVAPTPLTSLSQPN 154


>AY128453-1|AAM75046.1| 1149|Drosophila melanogaster LP05923p
           protein.
          Length = 1149

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 22/75 (29%), Positives = 37/75 (49%)
 Frame = -1

Query: 285 METCEHSVVRSLAIAKGTKTRVQ*FVGHRVERTPHRASAGTLSEAAAHSCTAVIVSGNGS 106
           +E  E++   ++ + + +   VQ  V  RV   P  A AG +    +HS ++V +  NGS
Sbjct: 83  LENVEYAT--AVQVLRDSGNTVQLVVKRRVPLNPINA-AGAVQHQHSHSLSSVGLMANGS 139

Query: 105 SVNASLPTTLLAELN 61
              A  P T L++ N
Sbjct: 140 GGVAPTPITSLSQPN 154


>AY119641-1|AAM50295.1|  581|Drosophila melanogaster RE44178p
           protein.
          Length = 581

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 654 HATWARSTAPASRTNHNGAIGTSARPDNV 568
           H TWA +T  A+   HNG + + A P+ +
Sbjct: 10  HLTWAVATIAANGAGHNGPVASGAGPNGL 38


>AY051965-1|AAK93389.1|  974|Drosophila melanogaster LD43161p
           protein.
          Length = 974

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 22/75 (29%), Positives = 37/75 (49%)
 Frame = -1

Query: 285 METCEHSVVRSLAIAKGTKTRVQ*FVGHRVERTPHRASAGTLSEAAAHSCTAVIVSGNGS 106
           +E  E++   ++ + + +   VQ  V  RV   P  A AG +    +HS ++V +  NGS
Sbjct: 254 LENVEYAT--AVQVLRDSGNTVQLVVKRRVPLNPINA-AGAVQHQHSHSLSSVGLMANGS 310

Query: 105 SVNASLPTTLLAELN 61
              A  P T L++ N
Sbjct: 311 GGVAPTPITSLSQPN 325


>AF195242-1|AAF63250.1|  581|Drosophila melanogaster FRIZZLED 3
           protein.
          Length = 581

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 654 HATWARSTAPASRTNHNGAIGTSARPDNV 568
           H TWA +T  A+   HNG + + A P+ +
Sbjct: 10  HLTWAVATIAANGAGHNGPVASGAGPNGL 38


>AE014298-105|AAF45547.1|  581|Drosophila melanogaster CG16785-PA
           protein.
          Length = 581

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 654 HATWARSTAPASRTNHNGAIGTSARPDNV 568
           H TWA +T  A+   HNG + + A P+ +
Sbjct: 10  HLTWAVATIAANGAGHNGPVASGAGPNGL 38


>AE014297-836|AAF54303.3| 1167|Drosophila melanogaster CG31349-PE,
           isoform E protein.
          Length = 1167

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 22/75 (29%), Positives = 37/75 (49%)
 Frame = -1

Query: 285 METCEHSVVRSLAIAKGTKTRVQ*FVGHRVERTPHRASAGTLSEAAAHSCTAVIVSGNGS 106
           +E  E++   ++ + + +   VQ  V  RV   P  A AG +    +HS ++V +  NGS
Sbjct: 447 LENVEYAT--AVQVLRDSGNTVQLVVKRRVPLNPINA-AGAVQHQHSHSLSSVGLMANGS 503

Query: 105 SVNASLPTTLLAELN 61
              A  P T L++ N
Sbjct: 504 GGVAPTPITSLSQPN 518


>AE014297-835|AAN13402.2| 1149|Drosophila melanogaster CG31349-PF,
           isoform F protein.
          Length = 1149

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 22/75 (29%), Positives = 37/75 (49%)
 Frame = -1

Query: 285 METCEHSVVRSLAIAKGTKTRVQ*FVGHRVERTPHRASAGTLSEAAAHSCTAVIVSGNGS 106
           +E  E++   ++ + + +   VQ  V  RV   P  A AG +    +HS ++V +  NGS
Sbjct: 83  LENVEYAT--AVQVLRDSGNTVQLVVKRRVPLNPINA-AGAVQHQHSHSLSSVGLMANGS 139

Query: 105 SVNASLPTTLLAELN 61
              A  P T L++ N
Sbjct: 140 GGVAPTPITSLSQPN 154


>AE014297-834|AAF54300.3| 1371|Drosophila melanogaster CG31349-PB,
           isoform B protein.
          Length = 1371

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 22/75 (29%), Positives = 37/75 (49%)
 Frame = -1

Query: 285 METCEHSVVRSLAIAKGTKTRVQ*FVGHRVERTPHRASAGTLSEAAAHSCTAVIVSGNGS 106
           +E  E++   ++ + + +   VQ  V  RV   P  A AG +    +HS ++V +  NGS
Sbjct: 83  LENVEYAT--AVQVLRDSGNTVQLVVKRRVPLNPINA-AGAVQHQHSHSLSSVGLMANGS 139

Query: 105 SVNASLPTTLLAELN 61
              A  P T L++ N
Sbjct: 140 GGVAPTPITSLSQPN 154


>AE014297-833|AAN13403.2| 1293|Drosophila melanogaster CG31349-PC,
           isoform C protein.
          Length = 1293

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 22/75 (29%), Positives = 37/75 (49%)
 Frame = -1

Query: 285 METCEHSVVRSLAIAKGTKTRVQ*FVGHRVERTPHRASAGTLSEAAAHSCTAVIVSGNGS 106
           +E  E++   ++ + + +   VQ  V  RV   P  A AG +    +HS ++V +  NGS
Sbjct: 83  LENVEYAT--AVQVLRDSGNTVQLVVKRRVPLNPINA-AGAVQHQHSHSLSSVGLMANGS 139

Query: 105 SVNASLPTTLLAELN 61
              A  P T L++ N
Sbjct: 140 GGVAPTPITSLSQPN 154


>AE014297-832|AAF54301.3| 2090|Drosophila melanogaster CG31349-PA,
           isoform A protein.
          Length = 2090

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 22/75 (29%), Positives = 37/75 (49%)
 Frame = -1

Query: 285 METCEHSVVRSLAIAKGTKTRVQ*FVGHRVERTPHRASAGTLSEAAAHSCTAVIVSGNGS 106
           +E  E++   ++ + + +   VQ  V  RV   P  A AG +    +HS ++V +  NGS
Sbjct: 83  LENVEYAT--AVQVLRDSGNTVQLVVKRRVPLNPINA-AGAVQHQHSHSLSSVGLMANGS 139

Query: 105 SVNASLPTTLLAELN 61
              A  P T L++ N
Sbjct: 140 GGVAPTPITSLSQPN 154


>AB018565-1|BAA84677.1|  581|Drosophila melanogaster Dfrizzled-3
           protein.
          Length = 581

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 654 HATWARSTAPASRTNHNGAIGTSARPDNV 568
           H TWA +T  A+   HNG + + A P+ +
Sbjct: 10  HLTWAVATIAANGAGHNGPVASGAGPNGL 38


>AE014134-908|AAF52239.3| 2267|Drosophila melanogaster CG14023-PA
            protein.
          Length = 2267

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 28/96 (29%), Positives = 40/96 (41%)
 Frame = -1

Query: 363  STRASPAVQRGVVAFTVWA*ETGTFQMETCEHSVVRSLAIAKGTKTRVQ*FVGHRVERTP 184
            S   SP V       T+    T T Q  T +    R L +A    T V   V   V  + 
Sbjct: 1533 SINPSPVVVAAAATATLTTSSTPTTQ--TTQLICDRKLPVAMPPMTTVNNVVVATVNSSS 1590

Query: 183  HRASAGTLSEAAAHSCTAVIVSGNGSSVNASLPTTL 76
              A+  TLS  +  S  ++I +   +S  A+LP+TL
Sbjct: 1591 --AALSTLSSVSTASSASIITTSTSTSSPAALPSTL 1624


>AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p
           protein.
          Length = 906

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 17/58 (29%), Positives = 24/58 (41%)
 Frame = -2

Query: 314 CGHRRLALSKWKLASTVW*EVWRSPRVLRHGSNSSSAIASNVLHTGLARVHSARPLHT 141
           CG R L    W     +W +   SPR  R  + + S   + +L TG    +   P HT
Sbjct: 129 CGQRYLVGGDWNARHWLWGDTCNSPRG-RELAEALSVTGAKILATGSPTRYPYVPSHT 185


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,149,823
Number of Sequences: 53049
Number of extensions: 438532
Number of successful extensions: 1377
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)