Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24m01
         (673 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8MQJ2 Cluster: RE01517p; n=4; Sophophora|Rep: RE01517p...    37   0.51 
UniRef50_UPI0000F2D09F Cluster: PREDICTED: hypothetical protein;...    36   1.2  
UniRef50_UPI00015B587F Cluster: PREDICTED: similar to GA15723-PA...    35   1.6  
UniRef50_UPI0000D55D49 Cluster: PREDICTED: similar to CG10617-PA...    35   1.6  
UniRef50_Q21DM8 Cluster: Unsaturated uronyl hydrolase-like prote...    34   3.6  
UniRef50_O00445 Cluster: Synaptotagmin-5; n=35; Bilateria|Rep: S...    34   3.6  
UniRef50_UPI0000E463E8 Cluster: PREDICTED: hypothetical protein;...    33   4.8  
UniRef50_P21579 Cluster: Synaptotagmin-1; n=84; Eumetazoa|Rep: S...    33   4.8  
UniRef50_Q16RS0 Cluster: Synaptotagmin-12; n=1; Aedes aegypti|Re...    33   6.3  

>UniRef50_Q8MQJ2 Cluster: RE01517p; n=4; Sophophora|Rep: RE01517p -
           Drosophila melanogaster (Fruit fly)
          Length = 787

 Score = 36.7 bits (81), Expect = 0.51
 Identities = 16/30 (53%), Positives = 17/30 (56%)
 Frame = +3

Query: 141 RHWAQMAHETRKAVAMWHTLR*THNKTSLT 230
           RHW QM    RK VAMWH LR   N+   T
Sbjct: 733 RHWHQMLSSLRKPVAMWHVLRRAVNQPIFT 762


>UniRef50_UPI0000F2D09F Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 91

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +2

Query: 479 YPVEG-GNEPGCRTTEPPERKGGRREGPSRAPPHP 580
           +P +G GNEPG   TEPPE        P R PP P
Sbjct: 26  FPGQGWGNEPGDPGTEPPEPGAAEPPAPPRPPPPP 60


>UniRef50_UPI00015B587F Cluster: PREDICTED: similar to GA15723-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           GA15723-PA - Nasonia vitripennis
          Length = 727

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 13/19 (68%), Positives = 13/19 (68%)
 Frame = +3

Query: 144 HWAQMAHETRKAVAMWHTL 200
           HW  M    RKAVAMWHTL
Sbjct: 708 HWQNMTQSPRKAVAMWHTL 726


>UniRef50_UPI0000D55D49 Cluster: PREDICTED: similar to CG10617-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG10617-PA - Tribolium castaneum
          Length = 490

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +3

Query: 144 HWAQMAHETRKAVAMWHTLR 203
           HW QM    RK VAMWHTLR
Sbjct: 470 HWNQMLTALRKPVAMWHTLR 489


>UniRef50_Q21DM8 Cluster: Unsaturated uronyl hydrolase-like protein;
           n=1; Saccharophagus degradans 2-40|Rep: Unsaturated
           uronyl hydrolase-like protein - Saccharophagus degradans
           (strain 2-40 / ATCC 43961 / DSM 17024)
          Length = 389

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -3

Query: 374 YSQRSMFWSTNNGWIFRGI 318
           + QR +FWS  NGW+F GI
Sbjct: 235 HKQRKLFWSRGNGWVFGGI 253


>UniRef50_O00445 Cluster: Synaptotagmin-5; n=35; Bilateria|Rep:
           Synaptotagmin-5 - Homo sapiens (Human)
          Length = 386

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 117 AAEPAAEGRHWAQMAHETRKAVAMWHTLR 203
           AA   A  RHWA M    R+ +A WH+LR
Sbjct: 347 AAAGGAGLRHWADMLANPRRPIAQWHSLR 375


>UniRef50_UPI0000E463E8 Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 322

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = +3

Query: 144 HWAQMAHETRKAVAMWHTLR 203
           HW QM    RK VAMWH+LR
Sbjct: 302 HWNQMLISLRKPVAMWHSLR 321


>UniRef50_P21579 Cluster: Synaptotagmin-1; n=84; Eumetazoa|Rep:
           Synaptotagmin-1 - Homo sapiens (Human)
          Length = 422

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +3

Query: 132 AEGRHWAQMAHETRKAVAMWHTLR 203
           AE RHW+ M    R+ +A WHTL+
Sbjct: 386 AELRHWSDMLANPRRPIAQWHTLQ 409


>UniRef50_Q16RS0 Cluster: Synaptotagmin-12; n=1; Aedes aegypti|Rep:
           Synaptotagmin-12 - Aedes aegypti (Yellowfever mosquito)
          Length = 832

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 141 RHWAQMAHETRKAVAMWHTLR*THNK 218
           RHW QM    RK V MWH L+ T  +
Sbjct: 791 RHWHQMLTTLRKPVTMWHALKTTSER 816


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,195,680
Number of Sequences: 1657284
Number of extensions: 12756601
Number of successful extensions: 35287
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 33412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35242
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)