Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24m01
         (673 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   2.2  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    24   5.0  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    23   8.8  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = +2

Query: 527  PERKGGRREGPSRAPP-HPILDYKE 598
            PE KG  +   SR PP  P LDY +
Sbjct: 2479 PEHKGSSQRNCSRGPPCSPGLDYDD 2503


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -3

Query: 386 PLNQYSQRSMFWSTNNGWIFRGIG 315
           P +QY   S  +S  NGW   G G
Sbjct: 49  PHSQYGAHSANFSAQNGWPTDGFG 72


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +2

Query: 236 SLLVSLHMDTVTFFFLERILQGTM 307
           S+L SL    +T+F+ ER++QG M
Sbjct: 352 SILFSL---PITYFYEERLIQGKM 372


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,969
Number of Sequences: 2352
Number of extensions: 13883
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)