Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24m01
(673 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X96783-1|CAA65579.1| 386|Homo sapiens synaptotagmin V protein. 34 0.53
DQ090951-1|AAY99640.1| 385|Homo sapiens synaptotagmin V protein. 34 0.53
BC046157-1|AAH46157.1| 386|Homo sapiens synaptotagmin V protein. 34 0.53
M55047-1|AAA60609.1| 422|Homo sapiens synaptotagmin p65 protein. 33 0.70
BC058917-1|AAH58917.1| 422|Homo sapiens SYT1 protein protein. 33 0.70
U22680-1|AAA98503.1| 1088|Homo sapiens X2 box repressor protein. 31 2.8
U22314-1|AAB17211.1| 1097|Homo sapiens REST protein protein. 31 2.8
U13879-1|AAC50115.1| 681|Homo sapiens neuron-restrictive silenc... 31 2.8
BC132859-1|AAI32860.1| 1097|Homo sapiens RE1-silencing transcrip... 31 2.8
BC038985-1|AAH38985.1| 454|Homo sapiens Similar to RE1-silencin... 31 2.8
BC017822-1|AAH17822.1| 460|Homo sapiens Unknown (protein for IM... 31 2.8
AF228045-1|AAF61710.1| 149|Homo sapiens truncated neuron restri... 31 2.8
AB209750-1|BAD92987.1| 1126|Homo sapiens RE1-silencing transcrip... 31 2.8
BC100817-1|AAI00818.1| 419|Homo sapiens synaptotagmin II protein. 31 5.0
BC100816-1|AAI00817.1| 317|Homo sapiens SYT2 protein protein. 31 5.0
BC100815-1|AAI00816.1| 419|Homo sapiens synaptotagmin II protein. 31 5.0
BC100814-1|AAI00815.1| 419|Homo sapiens synaptotagmin II protein. 31 5.0
AK094430-1|BAC04354.1| 419|Homo sapiens protein ( Homo sapiens ... 31 5.0
AK090672-1|BAC03500.1| 419|Homo sapiens protein ( Homo sapiens ... 31 5.0
BC093832-1|AAH93832.1| 426|Homo sapiens synaptotagmin XIII prot... 30 6.6
BC093830-1|AAH93830.1| 426|Homo sapiens synaptotagmin XIII prot... 30 6.6
BC037406-1|AAH37406.1| 421|Homo sapiens synaptotagmin XII protein. 30 6.6
BC031067-1|AAH31067.1| 590|Homo sapiens SYT3 protein protein. 30 6.6
BC028379-1|AAH28379.1| 590|Homo sapiens SYT3 protein protein. 30 6.6
BC004518-1|AAH04518.1| 474|Homo sapiens synaptotagmin XVII prot... 30 6.6
AL833834-1|CAD38694.1| 361|Homo sapiens hypothetical protein pr... 30 6.6
AF220560-1|AAF37825.1| 474|Homo sapiens B/K protein protein. 30 6.6
AC003003-1|AAC05436.1| 361|Homo sapiens Homolog of rat B/K prot... 30 6.6
AB037848-1|BAA92665.1| 439|Homo sapiens KIAA1427 protein protein. 30 6.6
>X96783-1|CAA65579.1| 386|Homo sapiens synaptotagmin V protein.
Length = 386
Score = 33.9 bits (74), Expect = 0.53
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 117 AAEPAAEGRHWAQMAHETRKAVAMWHTLR 203
AA A RHWA M R+ +A WH+LR
Sbjct: 347 AAAGGAGLRHWADMLANPRRPIAQWHSLR 375
>DQ090951-1|AAY99640.1| 385|Homo sapiens synaptotagmin V protein.
Length = 385
Score = 33.9 bits (74), Expect = 0.53
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 117 AAEPAAEGRHWAQMAHETRKAVAMWHTLR 203
AA A RHWA M R+ +A WH+LR
Sbjct: 346 AAAGGAGLRHWADMLANPRRPIAQWHSLR 374
>BC046157-1|AAH46157.1| 386|Homo sapiens synaptotagmin V protein.
Length = 386
Score = 33.9 bits (74), Expect = 0.53
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 117 AAEPAAEGRHWAQMAHETRKAVAMWHTLR 203
AA A RHWA M R+ +A WH+LR
Sbjct: 347 AAAGGAGLRHWADMLANPRRPIAQWHSLR 375
>M55047-1|AAA60609.1| 422|Homo sapiens synaptotagmin p65 protein.
Length = 422
Score = 33.5 bits (73), Expect = 0.70
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 132 AEGRHWAQMAHETRKAVAMWHTLR 203
AE RHW+ M R+ +A WHTL+
Sbjct: 386 AELRHWSDMLANPRRPIAQWHTLQ 409
>BC058917-1|AAH58917.1| 422|Homo sapiens SYT1 protein protein.
Length = 422
Score = 33.5 bits (73), Expect = 0.70
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 132 AEGRHWAQMAHETRKAVAMWHTLR 203
AE RHW+ M R+ +A WHTL+
Sbjct: 386 AELRHWSDMLANPRRPIAQWHTLQ 409
>U22680-1|AAA98503.1| 1088|Homo sapiens X2 box repressor protein.
Length = 1088
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +1
Query: 217 KHLLLHFTTR*FTHGHCDLFFSRKN-----IAGHDGPRPIPRKIHP 339
KHL HF + +T G C+ F RKN + H G RP ++ P
Sbjct: 264 KHLRNHFPRKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCP 309
>U22314-1|AAB17211.1| 1097|Homo sapiens REST protein protein.
Length = 1097
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +1
Query: 217 KHLLLHFTTR*FTHGHCDLFFSRKN-----IAGHDGPRPIPRKIHP 339
KHL HF + +T G C+ F RKN + H G RP ++ P
Sbjct: 265 KHLRNHFPRKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCP 310
>U13879-1|AAC50115.1| 681|Homo sapiens neuron-restrictive silencer
factor protein.
Length = 681
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +1
Query: 217 KHLLLHFTTR*FTHGHCDLFFSRKN-----IAGHDGPRPIPRKIHP 339
KHL HF + +T G C+ F RKN + H G RP ++ P
Sbjct: 347 KHLRNHFPRKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCP 392
>BC132859-1|AAI32860.1| 1097|Homo sapiens RE1-silencing
transcription factor protein.
Length = 1097
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +1
Query: 217 KHLLLHFTTR*FTHGHCDLFFSRKN-----IAGHDGPRPIPRKIHP 339
KHL HF + +T G C+ F RKN + H G RP ++ P
Sbjct: 265 KHLRNHFPRKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCP 310
>BC038985-1|AAH38985.1| 454|Homo sapiens Similar to RE1-silencing
transcription factor protein.
Length = 454
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +1
Query: 217 KHLLLHFTTR*FTHGHCDLFFSRKN-----IAGHDGPRPIPRKIHP 339
KHL HF + +T G C+ F RKN + H G RP ++ P
Sbjct: 265 KHLRNHFPRKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCP 310
>BC017822-1|AAH17822.1| 460|Homo sapiens Unknown (protein for
IMAGE:4690075) protein.
Length = 460
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +1
Query: 217 KHLLLHFTTR*FTHGHCDLFFSRKN-----IAGHDGPRPIPRKIHP 339
KHL HF + +T G C+ F RKN + H G RP ++ P
Sbjct: 265 KHLRNHFPRKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCP 310
>AF228045-1|AAF61710.1| 149|Homo sapiens truncated neuron
restrictive silencer factor isoform protein.
Length = 149
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +1
Query: 217 KHLLLHFTTR*FTHGHCDLFFSRKN-----IAGHDGPRPIPRKIHP 339
KHL HF + +T G C+ F RKN + H G RP ++ P
Sbjct: 74 KHLRNHFPRKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCP 119
>AB209750-1|BAD92987.1| 1126|Homo sapiens RE1-silencing
transcription factor variant protein.
Length = 1126
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +1
Query: 217 KHLLLHFTTR*FTHGHCDLFFSRKN-----IAGHDGPRPIPRKIHP 339
KHL HF + +T G C+ F RKN + H G RP ++ P
Sbjct: 294 KHLRNHFPRKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCP 339
>BC100817-1|AAI00818.1| 419|Homo sapiens synaptotagmin II protein.
Length = 419
Score = 30.7 bits (66), Expect = 5.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 135 EGRHWAQMAHETRKAVAMWHTLR 203
E RHW+ M R+ +A WH+L+
Sbjct: 384 ELRHWSDMLANPRRPIAQWHSLK 406
>BC100816-1|AAI00817.1| 317|Homo sapiens SYT2 protein protein.
Length = 317
Score = 30.7 bits (66), Expect = 5.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 135 EGRHWAQMAHETRKAVAMWHTLR 203
E RHW+ M R+ +A WH+L+
Sbjct: 282 ELRHWSDMLANPRRPIAQWHSLK 304
>BC100815-1|AAI00816.1| 419|Homo sapiens synaptotagmin II protein.
Length = 419
Score = 30.7 bits (66), Expect = 5.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 135 EGRHWAQMAHETRKAVAMWHTLR 203
E RHW+ M R+ +A WH+L+
Sbjct: 384 ELRHWSDMLANPRRPIAQWHSLK 406
>BC100814-1|AAI00815.1| 419|Homo sapiens synaptotagmin II protein.
Length = 419
Score = 30.7 bits (66), Expect = 5.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 135 EGRHWAQMAHETRKAVAMWHTLR 203
E RHW+ M R+ +A WH+L+
Sbjct: 384 ELRHWSDMLANPRRPIAQWHSLK 406
>AK094430-1|BAC04354.1| 419|Homo sapiens protein ( Homo sapiens
cDNA FLJ37111 fis, clone BRACE2021254, highly similar to
SYNAPTOTAGMIN II. ).
Length = 419
Score = 30.7 bits (66), Expect = 5.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 135 EGRHWAQMAHETRKAVAMWHTLR 203
E RHW+ M R+ +A WH+L+
Sbjct: 384 ELRHWSDMLANPRRPIAQWHSLK 406
>AK090672-1|BAC03500.1| 419|Homo sapiens protein ( Homo sapiens
cDNA FLJ33353 fis, clone BRACE2005118, highly similar to
SYNAPTOTAGMIN II. ).
Length = 419
Score = 30.7 bits (66), Expect = 5.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 135 EGRHWAQMAHETRKAVAMWHTLR 203
E RHW+ M R+ +A WH+L+
Sbjct: 384 ELRHWSDMLANPRRPIAQWHSLK 406
>BC093832-1|AAH93832.1| 426|Homo sapiens synaptotagmin XIII
protein.
Length = 426
Score = 30.3 bits (65), Expect = 6.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 132 AEGRHWAQMAHETRKAVAMWHTL 200
+E HW +M R+ +AMWH L
Sbjct: 402 SERSHWEEMLKNPRRQIAMWHQL 424
>BC093830-1|AAH93830.1| 426|Homo sapiens synaptotagmin XIII
protein.
Length = 426
Score = 30.3 bits (65), Expect = 6.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 132 AEGRHWAQMAHETRKAVAMWHTL 200
+E HW +M R+ +AMWH L
Sbjct: 402 SERSHWEEMLKNPRRQIAMWHQL 424
>BC037406-1|AAH37406.1| 421|Homo sapiens synaptotagmin XII protein.
Length = 421
Score = 30.3 bits (65), Expect = 6.6
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = +3
Query: 126 PAAEGR---HWAQMAHETRKAVAMWHTLR 203
P+A G HW QM R+ V+MWH +R
Sbjct: 391 PSASGMGTTHWNQMLATLRRPVSMWHAVR 419
>BC031067-1|AAH31067.1| 590|Homo sapiens SYT3 protein protein.
Length = 590
Score = 30.3 bits (65), Expect = 6.6
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +3
Query: 117 AAEPAAEGRHWAQMAHETRKAVAMWHTLR*THNKTSLT 230
AA+P HWA+M RK V WH L TS T
Sbjct: 541 AADPHGR-EHWAEMLANPRKPVEHWHQLVEEKTVTSFT 577
>BC028379-1|AAH28379.1| 590|Homo sapiens SYT3 protein protein.
Length = 590
Score = 30.3 bits (65), Expect = 6.6
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +3
Query: 117 AAEPAAEGRHWAQMAHETRKAVAMWHTLR*THNKTSLT 230
AA+P HWA+M RK V WH L TS T
Sbjct: 541 AADPHGR-EHWAEMLANPRKPVEHWHQLVEEKTVTSFT 577
>BC004518-1|AAH04518.1| 474|Homo sapiens synaptotagmin XVII
protein.
Length = 474
Score = 30.3 bits (65), Expect = 6.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 132 AEGRHWAQMAHETRKAVAMWHTLR 203
+E HW +M + R AV WH+LR
Sbjct: 435 SETNHWRRMLNTHRTAVEQWHSLR 458
>AL833834-1|CAD38694.1| 361|Homo sapiens hypothetical protein
protein.
Length = 361
Score = 30.3 bits (65), Expect = 6.6
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = +3
Query: 126 PAAEGR---HWAQMAHETRKAVAMWHTLR 203
P+A G HW QM R+ V+MWH +R
Sbjct: 331 PSASGMGTTHWNQMLATLRRPVSMWHAVR 359
>AF220560-1|AAF37825.1| 474|Homo sapiens B/K protein protein.
Length = 474
Score = 30.3 bits (65), Expect = 6.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 132 AEGRHWAQMAHETRKAVAMWHTLR 203
+E HW +M + R AV WH+LR
Sbjct: 435 SETNHWRRMLNTHRTAVEQWHSLR 458
>AC003003-1|AAC05436.1| 361|Homo sapiens Homolog of rat B/K protein
product protein.
Length = 361
Score = 30.3 bits (65), Expect = 6.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 132 AEGRHWAQMAHETRKAVAMWHTLR 203
+E HW +M + R AV WH+LR
Sbjct: 322 SETNHWRRMLNTHRTAVEQWHSLR 345
>AB037848-1|BAA92665.1| 439|Homo sapiens KIAA1427 protein protein.
Length = 439
Score = 30.3 bits (65), Expect = 6.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 132 AEGRHWAQMAHETRKAVAMWHTL 200
+E HW +M R+ +AMWH L
Sbjct: 415 SERSHWEEMLKNPRRQIAMWHQL 437
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,739,590
Number of Sequences: 237096
Number of extensions: 2067811
Number of successful extensions: 5358
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5320
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -