Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24l18
(714 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1B9.02c |sck1||serine/threonine protein kinase Sck1|Schizosa... 31 0.16
SPAC22E12.14c |sck2||serine/threonine protein kinase Sck2|Schizo... 30 0.29
SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces ... 29 0.87
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.5
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 27 2.7
SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase... 27 3.5
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 26 4.7
SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31 |... 26 4.7
SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces pomb... 26 6.1
SPAC14C4.03 |mek1||Cds1/Rad53/Chk2 family protein kinase Mek1 |S... 25 8.1
>SPAC1B9.02c |sck1||serine/threonine protein kinase
Sck1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 696
Score = 31.1 bits (67), Expect = 0.16
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Frame = +3
Query: 480 GRFGKISILSHKPTSKLYLQKTIS----------AHNFNVDEIKVHQLMNDHPNFIKIYF 629
G FG++ ++ T+++Y K IS H I V +++ P + + F
Sbjct: 311 GTFGQVYLVRKNDTNRIYAMKKISKKLIVRKKEVTHTLGERNILVRTSLDESPFIVGLKF 370
Query: 630 NHGFINNQVIVMDYIDCPDLFETLQIKG 713
+ ++ ++ DY+ +LF LQ +G
Sbjct: 371 SFQTASDLYLITDYMSGGELFWHLQHEG 398
>SPAC22E12.14c |sck2||serine/threonine protein kinase
Sck2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 646
Score = 30.3 bits (65), Expect = 0.29
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Frame = +3
Query: 480 GRFGKISILSHKPTSKLYLQKTIS----------AHNFNVDEIKVHQLMNDHPNFIKIYF 629
G FG++ ++ K T ++Y K +S AH +I V D P + + F
Sbjct: 275 GTFGQVYLVRKKDTERVYAMKVLSKKVIVRRKEVAHTVGERDILVQTSAADSPFIVALRF 334
Query: 630 NHGFINNQVIVMDYIDCPDLFETLQ 704
+ + +V DY+ +LF LQ
Sbjct: 335 SFQTPKDLYLVTDYMAGGELFWHLQ 359
>SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 496
Score = 28.7 bits (61), Expect = 0.87
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 573 EIKVHQLMNDHPNFIKIYFNHGFINNQVIVMDYIDCPDLFETLQ 704
EI++H+L N H N I Y + +V+++ DLF+ ++
Sbjct: 61 EIQLHKLCNGHKNIIHFYNTAENPQWRWVVLEFAQGGDLFDKIE 104
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 27.9 bits (59), Expect = 1.5
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +3
Query: 552 AHNFNVDEIKVHQLMNDHP-----NFIKIYFNHGFINNQVIVMDYI 674
A NFN EI+ + N P N I YFNH F N Q++ +I
Sbjct: 2282 ASNFNTLEIEFMKGSNLAPGCQFENIICPYFNHEFSNEQLLQQKFI 2327
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 27.1 bits (57), Expect = 2.7
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Frame = +3
Query: 480 GRFGKISILSHKPTSKLY----LQKTISAHNFNVDEIK----VHQLMN--DHPNFIKIYF 629
G FGK+ + +K K Y L+K N ++ +K V ++ N HP + ++
Sbjct: 673 GNFGKVMLAEYKVNKKFYAIKVLKKEAILKNEELESLKTEKHVFEVANKEKHPFLLNLFA 732
Query: 630 NHGFINNQVIVMDYIDCPDLFETLQ 704
+ VM+YI DL +Q
Sbjct: 733 SFQTSTRVYFVMEYILGGDLMVHIQ 757
>SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase
Cmk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 26.6 bits (56), Expect = 3.5
Identities = 18/85 (21%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Frame = +3
Query: 480 GRFGKISILSHKPTSKLYLQKTISA------HNFNVDEIKVHQLMN-DHPNFIKIYFNHG 638
G + + H T+K+Y K ++ +F +EI + + ++ +HPN + +
Sbjct: 40 GTYATVREAVHIETNKMYAAKIMNKKMMEKKQDFVKNEIAILKRVSYEHPNILHLVDFFE 99
Query: 639 FINNQVIVMDYIDCPDLFETLQIKG 713
+NN ++ + +LF+ + KG
Sbjct: 100 TVNNLYLITELATGGELFDRICAKG 124
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 26.2 bits (55), Expect = 4.7
Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 420 TLVQFYENCKNVKTRYKIINGRFGKISILSHKPTSKLYLQKTISA--HNFNVDEIKVHQL 593
+L++ + C N +RY K+S++ H+ L L+ +S N ++IK ++
Sbjct: 656 SLLKLFFKCANEGSRYNASAALSFKLSLMLHEKEEVLLLKTNVSCVLANHGYNDIKFEEM 715
Query: 594 M 596
+
Sbjct: 716 V 716
>SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1032
Score = 26.2 bits (55), Expect = 4.7
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Frame = +3
Query: 468 KIINGRFGKISILSHKPTSKLYLQKTISAHNFN-VDEIK--VHQLMNDH-----PNFIKI 623
+I G +G++ + + + K + K I + + + +IK + + N H PN +K+
Sbjct: 533 EINRGAYGRVYLAKKRSSGKYFALKMIPKSSLDSLKKIKGLLLEKRNMHIQRYGPNTVKL 592
Query: 624 YFNHGFINNQVIVMDYI---DCPDLFETL 701
Y+ + +VMDY DC L + L
Sbjct: 593 YYAFDSGDYLCLVMDYFNGGDCETLIQKL 621
>SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 347
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +1
Query: 391 PPPPQMLRCKRWYNFTKTAKTSKLGIK*STGVLAKYLFY 507
PP ++ WY+F + +G+ +G + Y+FY
Sbjct: 244 PPALFLIFATPWYHFIQLVLPHYIGVAGFSGAILGYVFY 282
>SPAC14C4.03 |mek1||Cds1/Rad53/Chk2 family protein kinase Mek1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 445
Score = 25.4 bits (53), Expect = 8.1
Identities = 17/59 (28%), Positives = 23/59 (38%)
Frame = +3
Query: 525 KLYLQKTISAHNFNVDEIKVHQLMNDHPNFIKIYFNHGFINNQVIVMDYIDCPDLFETL 701
K+ +K IS F D DHPN IK+ + I + + DLF L
Sbjct: 189 KIIDKKKISTKRFFEDHEMTILRKLDHPNIIKVNMEYNSETQFFIFEEMVTGGDLFSYL 247
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,827,527
Number of Sequences: 5004
Number of extensions: 58310
Number of successful extensions: 204
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 333194204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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