Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24l18
(714 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81140-4|CAJ55247.1| 463|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z81140-3|CAJ55246.1| 453|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z83228-3|CAB60998.1| 536|Caenorhabditis elegans Hypothetical pr... 35 0.050
AF145377-1|AAD39816.1| 536|Caenorhabditis elegans MOM-4 protein. 35 0.050
AF143242-1|AAD37359.1| 536|Caenorhabditis elegans protein kinas... 35 0.050
U40416-1|AAA81410.2| 822|Caenorhabditis elegans Protein kinase ... 31 0.62
AF403714-1|AAK97497.1| 822|Caenorhabditis elegans serine/threon... 31 0.62
Z95122-2|CAB08355.1| 363|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z48230-2|CAA88264.1| 363|Caenorhabditis elegans Hypothetical pr... 30 1.4
AL117193-13|CAB55004.2| 478|Caenorhabditis elegans Hypothetical... 30 1.4
Z66497-10|CAH19101.1| 346|Caenorhabditis elegans Hypothetical p... 30 1.9
Z66497-2|CAD59153.1| 336|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z66497-1|CAA91283.1| 521|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81594-1|CAB04745.1| 908|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 29 4.4
U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonin... 29 4.4
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 29 4.4
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 25 5.1
Z54342-11|CAA91146.1| 502|Caenorhabditis elegans Hypothetical p... 28 5.8
U40943-3|AAM69117.1| 325|Caenorhabditis elegans Hypothetical pr... 28 7.6
U40943-1|AAK72061.2| 398|Caenorhabditis elegans Hypothetical pr... 28 7.6
AJ012357-1|CAB41352.1| 371|Caenorhabditis elegans cyclic AMP-de... 28 7.6
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z81140-4|CAJ55247.1| 463|Caenorhabditis elegans Hypothetical
protein W10G6.2b protein.
Length = 463
Score = 36.3 bits (80), Expect = 0.022
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Frame = +3
Query: 480 GRFGKISILSHKPTSKLYLQKTIS-AHNFNVDEIK-----VHQLMND--HPNFIKIYFNH 635
G FG++ + HK T K+Y K +S H +E+K + L+N+ HP + ++F+
Sbjct: 144 GSFGRVYQVRHKETKKIYAMKILSKEHIRKKNEVKHVMAERNVLINNFKHPFLVSLHFSF 203
Query: 636 GFINNQVIVMDYIDCPDLFETLQ 704
V+D+++ +LF LQ
Sbjct: 204 QNKEKLYFVLDHLNGGELFSHLQ 226
>Z81140-3|CAJ55246.1| 453|Caenorhabditis elegans Hypothetical
protein W10G6.2a protein.
Length = 453
Score = 36.3 bits (80), Expect = 0.022
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Frame = +3
Query: 480 GRFGKISILSHKPTSKLYLQKTIS-AHNFNVDEIK-----VHQLMND--HPNFIKIYFNH 635
G FG++ + HK T K+Y K +S H +E+K + L+N+ HP + ++F+
Sbjct: 134 GSFGRVYQVRHKETKKIYAMKILSKEHIRKKNEVKHVMAERNVLINNFKHPFLVSLHFSF 193
Query: 636 GFINNQVIVMDYIDCPDLFETLQ 704
V+D+++ +LF LQ
Sbjct: 194 QNKEKLYFVLDHLNGGELFSHLQ 216
>Z83228-3|CAB60998.1| 536|Caenorhabditis elegans Hypothetical
protein F52F12.3 protein.
Length = 536
Score = 35.1 bits (77), Expect = 0.050
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 567 VDEIKVHQLMNDHPNFIKIY-FNHGFINNQVIVMDYIDCPDLFETL 701
+ E KV + +HPN IKIY N Q +VM+Y+DC + + L
Sbjct: 95 IREAKVMWDLRNHPNIIKIYGLYKSPRNGQGVVMEYMDCGSMADLL 140
>AF145377-1|AAD39816.1| 536|Caenorhabditis elegans MOM-4 protein.
Length = 536
Score = 35.1 bits (77), Expect = 0.050
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 567 VDEIKVHQLMNDHPNFIKIY-FNHGFINNQVIVMDYIDCPDLFETL 701
+ E KV + +HPN IKIY N Q +VM+Y+DC + + L
Sbjct: 95 IREAKVMWDLRNHPNIIKIYGLYKSPRNGQGVVMEYMDCGSMADLL 140
>AF143242-1|AAD37359.1| 536|Caenorhabditis elegans protein kinase
MOM-4 protein.
Length = 536
Score = 35.1 bits (77), Expect = 0.050
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 567 VDEIKVHQLMNDHPNFIKIY-FNHGFINNQVIVMDYIDCPDLFETL 701
+ E KV + +HPN IKIY N Q +VM+Y+DC + + L
Sbjct: 95 IREAKVMWDLRNHPNIIKIYGLYKSPRNGQGVVMEYMDCGSMADLL 140
>U40416-1|AAA81410.2| 822|Caenorhabditis elegans Protein kinase
protein 29 protein.
Length = 822
Score = 31.5 bits (68), Expect = 0.62
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Frame = +3
Query: 480 GRFGKISILSHKPTSKLYLQKTISAHNFNVD-------EIKVHQLMNDHPNFIKIYFNHG 638
G F + I HK K+I + + E+K+ +++ DHP+ +K Y
Sbjct: 25 GNFATVRIARHKIAKTKVAIKSIDVSALDRENLIKLEREVKIVKVI-DHPHIVKSYEIMR 83
Query: 639 FINNQVIVMDYIDCPDLFETLQIKG 713
N IV +Y +L+ETL KG
Sbjct: 84 VDNMLYIVSEYCSSGELYETLIEKG 108
>AF403714-1|AAK97497.1| 822|Caenorhabditis elegans serine/threonine
kinase KIN-29 protein.
Length = 822
Score = 31.5 bits (68), Expect = 0.62
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Frame = +3
Query: 480 GRFGKISILSHKPTSKLYLQKTISAHNFNVD-------EIKVHQLMNDHPNFIKIYFNHG 638
G F + I HK K+I + + E+K+ +++ DHP+ +K Y
Sbjct: 25 GNFATVRIARHKIAKTKVAIKSIDVSALDRENLIKLEREVKIVKVI-DHPHIVKSYEIMR 83
Query: 639 FINNQVIVMDYIDCPDLFETLQIKG 713
N IV +Y +L+ETL KG
Sbjct: 84 VDNMLYIVSEYCSSGELYETLIEKG 108
>Z95122-2|CAB08355.1| 363|Caenorhabditis elegans Hypothetical
protein F42G10.2 protein.
Length = 363
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 450 NVKTRYKIINGRFGKISILSHKPTSKLYLQKTISAHNFNVDEIKVHQLMNDHPNFIK 620
N++ I NG FG + + HK T KL K I + N+ + +L+ +H +K
Sbjct: 65 NLQDLGAIGNGNFGTVYKMRHKETGKLIAVKRIRCN--NIGHREQIRLLREHDTIVK 119
>Z48230-2|CAA88264.1| 363|Caenorhabditis elegans Hypothetical
protein F42G10.2 protein.
Length = 363
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 450 NVKTRYKIINGRFGKISILSHKPTSKLYLQKTISAHNFNVDEIKVHQLMNDHPNFIK 620
N++ I NG FG + + HK T KL K I + N+ + +L+ +H +K
Sbjct: 65 NLQDLGAIGNGNFGTVYKMRHKETGKLIAVKRIRCN--NIGHREQIRLLREHDTIVK 119
>AL117193-13|CAB55004.2| 478|Caenorhabditis elegans Hypothetical
protein Y105C5A.24 protein.
Length = 478
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Frame = +3
Query: 441 NCKNVKTRYKIINGRFGKISILSHKPT-SKLYLQKTI---SAHNFNVDEIKVHQLMN--D 602
NC + + + G FG + ++ T Y I SA + ++ + + + N +
Sbjct: 39 NCIDELNSHFLGKGTFGVVEKTKYRKTRDDTYRPAAIKYASATHLSILKREAKHMWNLRN 98
Query: 603 HPNFIKIY-FNHGFINNQVIVMDYIDC 680
H N IKIY N Q +VM+Y+DC
Sbjct: 99 HVNIIKIYGMYESHRNGQGLVMEYMDC 125
>Z66497-10|CAH19101.1| 346|Caenorhabditis elegans Hypothetical
protein K08F8.1d protein.
Length = 346
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = +3
Query: 480 GRFGKISILSHKPTSKLYLQKTISAHNFNVDEIKVHQLMNDHPNFIKI--YFNHGFINNQ 653
G GK+ K T + + K + E+++H L N H N + I + + F N +
Sbjct: 103 GESGKVMACYQKVTGEKFALKVLRDSQKARREVELHWLTNAHENVVSILDIYENTFDNVK 162
Query: 654 --VIVMDYIDCPDLFETLQIKG 713
++V+++++ DL + +G
Sbjct: 163 CLLMVVEFLEGGDLLSQFESQG 184
>Z66497-2|CAD59153.1| 336|Caenorhabditis elegans Hypothetical
protein K08F8.1b protein.
Length = 336
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = +3
Query: 480 GRFGKISILSHKPTSKLYLQKTISAHNFNVDEIKVHQLMNDHPNFIKI--YFNHGFINNQ 653
G GK+ K T + + K + E+++H L N H N + I + + F N +
Sbjct: 153 GESGKVMACYQKVTGEKFALKVLRDSQKARREVELHWLTNAHENVVSILDIYENTFDNVK 212
Query: 654 --VIVMDYIDCPDLFETLQIKG 713
++V+++++ DL + +G
Sbjct: 213 CLLMVVEFLEGGDLLSQFESQG 234
>Z66497-1|CAA91283.1| 521|Caenorhabditis elegans Hypothetical
protein K08F8.1a protein.
Length = 521
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = +3
Query: 480 GRFGKISILSHKPTSKLYLQKTISAHNFNVDEIKVHQLMNDHPNFIKI--YFNHGFINNQ 653
G GK+ K T + + K + E+++H L N H N + I + + F N +
Sbjct: 153 GESGKVMACYQKVTGEKFALKVLRDSQKARREVELHWLTNAHENVVSILDIYENTFDNVK 212
Query: 654 --VIVMDYIDCPDLFETLQIKG 713
++V+++++ DL + +G
Sbjct: 213 CLLMVVEFLEGGDLLSQFESQG 234
>Z81594-1|CAB04745.1| 908|Caenorhabditis elegans Hypothetical
protein T20F10.1 protein.
Length = 908
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Frame = +3
Query: 480 GRFGKISILSHKPTSKLYLQKTISAHNFNVDEIKVHQLMN-------DHPNFIKIYFNHG 638
G FGK+S++ T K+Y K++ + + + H D P ++++F+
Sbjct: 511 GAFGKVSLVRKNDTRKVYAMKSLEKADVIMKQQAAHVKAERDILAEADSPWIVRLFFSFQ 570
Query: 639 FINNQVIVMDYIDCPDLFETLQIKG 713
+M+Y+ D+ L KG
Sbjct: 571 DDACLYFIMEYVPGGDMMTLLIQKG 595
>Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 11/95 (11%)
Frame = +3
Query: 462 RYKIIN----GRFGKISILSHKPTSKLYLQKTISAHNFNVD-------EIKVHQLMNDHP 608
+YK++ G F K+ + H T K I N E+K+ + + DHP
Sbjct: 39 KYKLLKTIGKGNFAKVKLAKHVITGHEVAIKIIDKTALNPSSLQKLFREVKIMKQL-DHP 97
Query: 609 NFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKG 713
N +K+Y +V++Y ++F+ L G
Sbjct: 98 NIVKLYQVMETEQTLYLVLEYASGGEVFDYLVAHG 132
>Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 11/95 (11%)
Frame = +3
Query: 462 RYKIIN----GRFGKISILSHKPTSKLYLQKTISAHNFNVD-------EIKVHQLMNDHP 608
+YK++ G F K+ + H T K I N E+K+ + + DHP
Sbjct: 121 KYKLLKTIGKGNFAKVKLAKHVITGHEVAIKIIDKTALNPSSLQKLFREVKIMKQL-DHP 179
Query: 609 NFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKG 713
N +K+Y +V++Y ++F+ L G
Sbjct: 180 NIVKLYQVMETEQTLYLVLEYASGGEVFDYLVAHG 214
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 11/95 (11%)
Frame = +3
Query: 462 RYKIIN----GRFGKISILSHKPTSKLYLQKTISAHNFNVD-------EIKVHQLMNDHP 608
+YK++ G F K+ + H T K I N E+K+ + + DHP
Sbjct: 169 KYKLLKTIGKGNFAKVKLAKHVITGHEVAIKIIDKTALNPSSLQKLFREVKIMKQL-DHP 227
Query: 609 NFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKG 713
N +K+Y +V++Y ++F+ L G
Sbjct: 228 NIVKLYQVMETEQTLYLVLEYASGGEVFDYLVAHG 262
>Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 11/95 (11%)
Frame = +3
Query: 462 RYKIIN----GRFGKISILSHKPTSKLYLQKTISAHNFNVD-------EIKVHQLMNDHP 608
+YK++ G F K+ + H T K I N E+K+ + + DHP
Sbjct: 39 KYKLLKTIGKGNFAKVKLAKHVITGHEVAIKIIDKTALNPSSLQKLFREVKIMKQL-DHP 97
Query: 609 NFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKG 713
N +K+Y +V++Y ++F+ L G
Sbjct: 98 NIVKLYQVMETEQTLYLVLEYASGGEVFDYLVAHG 132
>Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 11/95 (11%)
Frame = +3
Query: 462 RYKIIN----GRFGKISILSHKPTSKLYLQKTISAHNFNVD-------EIKVHQLMNDHP 608
+YK++ G F K+ + H T K I N E+K+ + + DHP
Sbjct: 121 KYKLLKTIGKGNFAKVKLAKHVITGHEVAIKIIDKTALNPSSLQKLFREVKIMKQL-DHP 179
Query: 609 NFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKG 713
N +K+Y +V++Y ++F+ L G
Sbjct: 180 NIVKLYQVMETEQTLYLVLEYASGGEVFDYLVAHG 214
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 11/95 (11%)
Frame = +3
Query: 462 RYKIIN----GRFGKISILSHKPTSKLYLQKTISAHNFNVD-------EIKVHQLMNDHP 608
+YK++ G F K+ + H T K I N E+K+ + + DHP
Sbjct: 169 KYKLLKTIGKGNFAKVKLAKHVITGHEVAIKIIDKTALNPSSLQKLFREVKIMKQL-DHP 227
Query: 609 NFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKG 713
N +K+Y +V++Y ++F+ L G
Sbjct: 228 NIVKLYQVMETEQTLYLVLEYASGGEVFDYLVAHG 262
>U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1096
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 11/95 (11%)
Frame = +3
Query: 462 RYKIIN----GRFGKISILSHKPTSKLYLQKTISAHNFNVD-------EIKVHQLMNDHP 608
+YK++ G F K+ + H T K I N E+K+ + + DHP
Sbjct: 121 KYKLLKTIGKGNFAKVKLAKHVITGHEVAIKIIDKTALNPSSLQKLFREVKIMKQL-DHP 179
Query: 609 NFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKG 713
N +K+Y +V++Y ++F+ L G
Sbjct: 180 NIVKLYQVMETEQTLYLVLEYASGGEVFDYLVAHG 214
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 11/95 (11%)
Frame = +3
Query: 462 RYKIIN----GRFGKISILSHKPTSKLYLQKTISAHNFNVD-------EIKVHQLMNDHP 608
+YK++ G F K+ + H T K I N E+K+ + + DHP
Sbjct: 169 KYKLLKTIGKGNFAKVKLAKHVITGHEVAIKIIDKTALNPSSLQKLFREVKIMKQL-DHP 227
Query: 609 NFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIKG 713
N +K+Y +V++Y ++F+ L G
Sbjct: 228 NIVKLYQVMETEQTLYLVLEYASGGEVFDYLVAHG 262
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 24.6 bits (51), Expect(2) = 5.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 380 RHGHHHRH 403
RHGHHH H
Sbjct: 412 RHGHHHHH 419
Score = 22.2 bits (45), Expect(2) = 5.1
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = +2
Query: 383 HGHHHRHKC 409
H HHH H C
Sbjct: 415 HHHHHHHGC 423
>Z54342-11|CAA91146.1| 502|Caenorhabditis elegans Hypothetical
protein C08H9.5 protein.
Length = 502
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 570 DEIKVHQLMNDHPNFIKIYFNHGFINNQVIVMDYIDCPDLFETLQ 704
DE+KV + HPN + + F ++IV ++++ DL L+
Sbjct: 229 DELKVMCAVGKHPNILALVGGITFGERKMIVSEFVENGDLLSFLR 273
>U40943-3|AAM69117.1| 325|Caenorhabditis elegans Hypothetical
protein F47F2.1c protein.
Length = 325
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Frame = +3
Query: 480 GRFGKISILSHKPTSKLYLQKTISAHNFNVDEIKVHQLMND--------HPNFIKIYFNH 635
G FG++ + K T Y K ++ VD + + N+ HP +K+Y +
Sbjct: 26 GTFGRVELARDKITGAHYALKVLNIRRV-VDMRQTQHVHNEKRVLLQLKHPFIVKMYASE 84
Query: 636 GFINNQVIVMDYIDCPDLFETLQ 704
N+ ++M+++ ++F L+
Sbjct: 85 KDSNHLYMIMEFVPGGEMFSYLR 107
>U40943-1|AAK72061.2| 398|Caenorhabditis elegans Hypothetical
protein F47F2.1b protein.
Length = 398
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Frame = +3
Query: 480 GRFGKISILSHKPTSKLYLQKTISAHNFNVDEIKVHQLMND--------HPNFIKIYFNH 635
G FG++ + K T Y K ++ VD + + N+ HP +K+Y +
Sbjct: 99 GTFGRVELARDKITGAHYALKVLNIRRV-VDMRQTQHVHNEKRVLLQLKHPFIVKMYASE 157
Query: 636 GFINNQVIVMDYIDCPDLFETLQ 704
N+ ++M+++ ++F L+
Sbjct: 158 KDSNHLYMIMEFVPGGEMFSYLR 180
>AJ012357-1|CAB41352.1| 371|Caenorhabditis elegans cyclic
AMP-dependent protein kinase,catalytic subunit protein.
Length = 371
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Frame = +3
Query: 480 GRFGKISILSHKPTSKLYLQKTISAHNFNVDEIKVHQLMND--------HPNFIKIYFNH 635
G FG++ + K T Y K ++ VD + + N+ HP +K+Y +
Sbjct: 72 GTFGRVELARDKITGAHYALKVLNIRRV-VDMRQTQHVHNEKRVLLQLKHPFIVKMYASE 130
Query: 636 GFINNQVIVMDYIDCPDLFETLQ 704
N+ ++M+++ ++F L+
Sbjct: 131 KDSNHLYMIMEFVPGGEMFSYLR 153
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 124 MKRLVINVRDPSLRQSLYNTIAYIERLLNI 35
M+RL N DP QS YN + Y R N+
Sbjct: 140 MERLPDNRHDPHQNQSNYNMLQYFSRKYNL 169
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,739,368
Number of Sequences: 27780
Number of extensions: 334667
Number of successful extensions: 1204
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1199
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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