Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24l17
         (682 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT014660-1|AAT27284.1| 1357|Drosophila melanogaster LD09358p pro...    35   0.12 
AE014297-329|AAF51971.2| 1264|Drosophila melanogaster CG1347-PA,...    35   0.12 
AE014297-328|AAS65100.1| 1357|Drosophila melanogaster CG1347-PB,...    35   0.12 
AY113445-1|AAM29450.1| 1524|Drosophila melanogaster RE29777p pro...    29   4.5  
AE014297-2942|AAF55859.1|  338|Drosophila melanogaster CG5802-PA...    29   4.5  
AE013599-2523|AAF57823.2| 1524|Drosophila melanogaster CG10936-P...    29   4.5  
AE013599-2522|AAM68482.1| 1524|Drosophila melanogaster CG10936-P...    29   4.5  

>BT014660-1|AAT27284.1| 1357|Drosophila melanogaster LD09358p protein.
          Length = 1357

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 348  IKKSLIVVKRSAMRLARE-SREGSNVNASYTQIAAIKQNAYESEPRGPLTKPNALVFKSH 524
            +K+ +  + +   RL  E S+E S      + +AA++ +AY+    GPLT+  + V  SH
Sbjct: 914  LKEKIDYLNKDKCRLEEELSQEKSRRQEMESSVAAMRSSAYDLNVGGPLTRSKSGVSSSH 973

Query: 525  R 527
            R
Sbjct: 974  R 974


>AE014297-329|AAF51971.2| 1264|Drosophila melanogaster CG1347-PA,
            isoform A protein.
          Length = 1264

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 348  IKKSLIVVKRSAMRLARE-SREGSNVNASYTQIAAIKQNAYESEPRGPLTKPNALVFKSH 524
            +K+ +  + +   RL  E S+E S      + +AA++ +AY+    GPLT+  + V  SH
Sbjct: 914  LKEKIDYLNKDKCRLEEELSQEKSRRQEMESSVAAMRSSAYDLNVGGPLTRSKSGVSSSH 973

Query: 525  R 527
            R
Sbjct: 974  R 974


>AE014297-328|AAS65100.1| 1357|Drosophila melanogaster CG1347-PB,
            isoform B protein.
          Length = 1357

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 348  IKKSLIVVKRSAMRLARE-SREGSNVNASYTQIAAIKQNAYESEPRGPLTKPNALVFKSH 524
            +K+ +  + +   RL  E S+E S      + +AA++ +AY+    GPLT+  + V  SH
Sbjct: 914  LKEKIDYLNKDKCRLEEELSQEKSRRQEMESSVAAMRSSAYDLNVGGPLTRSKSGVSSSH 973

Query: 525  R 527
            R
Sbjct: 974  R 974


>AY113445-1|AAM29450.1| 1524|Drosophila melanogaster RE29777p protein.
          Length = 1524

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 292  TRRAITSKRLTGEHHGLNENSRFFMWRST 206
            T++ I  KR T   HG N ++ +  WRST
Sbjct: 1407 TKQPIKPKRFTNSMHGSNSSNIYDSWRST 1435


>AE014297-2942|AAF55859.1|  338|Drosophila melanogaster CG5802-PA
           protein.
          Length = 338

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +2

Query: 248 MMLTGEPFTGDSTSCESALVC--TIVLPISSTHLSNKKKPYRSETFGHEARP 397
           ++LT  P   D+T+  S + C  T +L + ST+++ +  PY +   G  A+P
Sbjct: 69  VLLTIRPQKEDTTNAGSYVACSLTYLLAMVSTNMAMRWVPYPTAVVGKSAKP 120


>AE013599-2523|AAF57823.2| 1524|Drosophila melanogaster CG10936-PB,
            isoform B protein.
          Length = 1524

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 292  TRRAITSKRLTGEHHGLNENSRFFMWRST 206
            T++ I  KR T   HG N ++ +  WRST
Sbjct: 1407 TKQPIKPKRFTNSMHGSNSSNIYDSWRST 1435


>AE013599-2522|AAM68482.1| 1524|Drosophila melanogaster CG10936-PA,
            isoform A protein.
          Length = 1524

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 292  TRRAITSKRLTGEHHGLNENSRFFMWRST 206
            T++ I  KR T   HG N ++ +  WRST
Sbjct: 1407 TKQPIKPKRFTNSMHGSNSSNIYDSWRST 1435


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,130,817
Number of Sequences: 53049
Number of extensions: 597671
Number of successful extensions: 919
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)