Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24l08
(697 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC129990-1|AAI29991.1| 695|Homo sapiens nuclear fragile X menta... 33 0.97
BC108307-1|AAI08308.1| 695|Homo sapiens nuclear fragile X menta... 33 0.97
AY232289-1|AAP69984.1| 695|Homo sapiens proliferation-inducing ... 33 0.97
AJ493465-1|CAD38278.1| 695|Homo sapiens FMRP interacting protei... 33 0.97
AB037742-1|BAA92559.1| 714|Homo sapiens KIAA1321 protein protein. 33 0.97
AK126104-1|BAC86442.1| 988|Homo sapiens protein ( Homo sapiens ... 30 6.9
BC113841-1|AAI13842.1| 678|Homo sapiens EPB41 protein protein. 30 9.1
BC024314-1|AAH24314.1| 814|Homo sapiens actin filament associat... 30 9.1
AL355302-1|CAI14968.1| 814|Homo sapiens actin filament associat... 30 9.1
AL133384-1|CAI40128.1| 814|Homo sapiens actin filament associat... 30 9.1
>BC129990-1|AAI29991.1| 695|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 2 protein.
Length = 695
Score = 33.1 bits (72), Expect = 0.97
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +2
Query: 320 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 493
N + K+D IP N N N + D+D + TTP+++ N+ K
Sbjct: 175 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 234
Query: 494 ETLNIESDIIKTEQTDAP 547
E LNI D I ++T P
Sbjct: 235 ENLNIVQDKIMQQETSVP 252
>BC108307-1|AAI08308.1| 695|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 2 protein.
Length = 695
Score = 33.1 bits (72), Expect = 0.97
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +2
Query: 320 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 493
N + K+D IP N N N + D+D + TTP+++ N+ K
Sbjct: 175 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 234
Query: 494 ETLNIESDIIKTEQTDAP 547
E LNI D I ++T P
Sbjct: 235 ENLNIVQDKIMQQETSVP 252
>AY232289-1|AAP69984.1| 695|Homo sapiens proliferation-inducing
gene 1 protein.
Length = 695
Score = 33.1 bits (72), Expect = 0.97
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +2
Query: 320 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 493
N + K+D IP N N N + D+D + TTP+++ N+ K
Sbjct: 175 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 234
Query: 494 ETLNIESDIIKTEQTDAP 547
E LNI D I ++T P
Sbjct: 235 ENLNIVQDKIMQQETSVP 252
>AJ493465-1|CAD38278.1| 695|Homo sapiens FMRP interacting protein,
82kD protein.
Length = 695
Score = 33.1 bits (72), Expect = 0.97
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +2
Query: 320 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 493
N + K+D IP N N N + D+D + TTP+++ N+ K
Sbjct: 175 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 234
Query: 494 ETLNIESDIIKTEQTDAP 547
E LNI D I ++T P
Sbjct: 235 ENLNIVQDKIMQQETSVP 252
>AB037742-1|BAA92559.1| 714|Homo sapiens KIAA1321 protein protein.
Length = 714
Score = 33.1 bits (72), Expect = 0.97
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +2
Query: 320 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 493
N + K+D IP N N N + D+D + TTP+++ N+ K
Sbjct: 194 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 253
Query: 494 ETLNIESDIIKTEQTDAP 547
E LNI D I ++T P
Sbjct: 254 ENLNIVQDKIMQQETSVP 271
>AK126104-1|BAC86442.1| 988|Homo sapiens protein ( Homo sapiens
cDNA FLJ44116 fis, clone TESTI4046884. ).
Length = 988
Score = 30.3 bits (65), Expect = 6.9
Identities = 25/102 (24%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = +2
Query: 233 IKMKI-NLCNIQFQSLINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNSVPEE- 406
+KM I NL +IQ Q L+N L + + S+K +++ I + + +N+ LR++S +
Sbjct: 304 VKMPIENLSSIQ-QKLLNKKRLPKLQPLKMFSDKSESNTINFKENIQNILLRVHSFHSQL 362
Query: 407 CTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTE 532
T N D+ + D+ ++ ++P ++ +I+ +E
Sbjct: 363 LTYAVNIISDMLAVIKNKLDNEISQMEPSSISILKENIVASE 404
>BC113841-1|AAI13842.1| 678|Homo sapiens EPB41 protein protein.
Length = 678
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 422 NFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTEQTDAPATSGD 562
NF +P P + D ++ PF TLNI I E TD SGD
Sbjct: 548 NFMESVPEPRPSEWDKRLSTHSPFRTLNINGQIPTGEGTD--DNSGD 592
>BC024314-1|AAH24314.1| 814|Homo sapiens actin filament associated
protein 1-like 2 protein.
Length = 814
Score = 29.9 bits (64), Expect = 9.1
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +2
Query: 383 RLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTEQTDA--PATS 556
+L + EEC +++ +DL L+ E KD+ A TL D E A PA++
Sbjct: 715 KLKEIDEECRGEESRRVDLELSIMEVKDNLKKAEAGPVTLGTTVDTTHLENPKAVTPASA 774
Query: 557 GD 562
D
Sbjct: 775 PD 776
>AL355302-1|CAI14968.1| 814|Homo sapiens actin filament associated
protein 1-like 2 protein.
Length = 814
Score = 29.9 bits (64), Expect = 9.1
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +2
Query: 383 RLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTEQTDA--PATS 556
+L + EEC +++ +DL L+ E KD+ A TL D E A PA++
Sbjct: 715 KLKEIDEECRGEESRRVDLELSIMEVKDNLKKAEAGPVTLGTTVDTTHLENPKAVTPASA 774
Query: 557 GD 562
D
Sbjct: 775 PD 776
>AL133384-1|CAI40128.1| 814|Homo sapiens actin filament associated
protein 1-like 2 protein.
Length = 814
Score = 29.9 bits (64), Expect = 9.1
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +2
Query: 383 RLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTEQTDA--PATS 556
+L + EEC +++ +DL L+ E KD+ A TL D E A PA++
Sbjct: 715 KLKEIDEECRGEESRRVDLELSIMEVKDNLKKAEAGPVTLGTTVDTTHLENPKAVTPASA 774
Query: 557 GD 562
D
Sbjct: 775 PD 776
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,106,343
Number of Sequences: 237096
Number of extensions: 1640859
Number of successful extensions: 12495
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12495
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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