Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24k17
         (501 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L38563-1|AAB36578.1|  195|Homo sapiens immunoglobulin lambda lig...    29   6.9  
BC126480-1|AAI26481.1|  660|Homo sapiens zinc finger protein 540...    29   9.1  
BC126478-1|AAI26479.1|  660|Homo sapiens zinc finger protein 540...    29   9.1  
BC017940-1|AAH17940.1|  531|Homo sapiens Unknown (protein for IM...    29   9.1  
AL832315-1|CAD38611.1|  660|Homo sapiens hypothetical protein pr...    29   9.1  
AL832100-1|CAD91161.1|  628|Homo sapiens hypothetical protein pr...    29   9.1  
AK131388-1|BAD18539.1|  637|Homo sapiens protein ( Homo sapiens ...    29   9.1  

>L38563-1|AAB36578.1|  195|Homo sapiens immunoglobulin lambda light
           chain protein.
          Length = 195

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 404 WQSDPQPLAQQSGALTTVPLNQSPNKFS 321
           W++D  P+  + G  TT P NQS NKF+
Sbjct: 148 WKADSSPV--KGGVETTTPSNQSNNKFA 173


>BC126480-1|AAI26481.1|  660|Homo sapiens zinc finger protein 540
           protein.
          Length = 660

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = -3

Query: 271 DKYKVKTKIEQQN*LSLRSDYWKTIVSRVLSTPAKCEGST*NQRAYTS 128
           ++++ K++ E Q  L  RS   K IVS+ +ST  K    T NQR + S
Sbjct: 120 NEWQNKSEFEGQQGLKERSISQKKIVSKKMSTDRKRPSFTLNQRIHNS 167


>BC126478-1|AAI26479.1|  660|Homo sapiens zinc finger protein 540
           protein.
          Length = 660

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = -3

Query: 271 DKYKVKTKIEQQN*LSLRSDYWKTIVSRVLSTPAKCEGST*NQRAYTS 128
           ++++ K++ E Q  L  RS   K IVS+ +ST  K    T NQR + S
Sbjct: 120 NEWQNKSEFEGQQGLKERSISQKKIVSKKMSTDRKRPSFTLNQRIHNS 167


>BC017940-1|AAH17940.1|  531|Homo sapiens Unknown (protein for
           IMAGE:4278917) protein.
          Length = 531

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = -3

Query: 271 DKYKVKTKIEQQN*LSLRSDYWKTIVSRVLSTPAKCEGST*NQRAYTS 128
           ++++ K++ E Q  L  RS   K IVS+ +ST  K    T NQR + S
Sbjct: 120 NEWQNKSEFEGQQGLKERSISQKKIVSKKMSTDRKRPSFTLNQRIHNS 167


>AL832315-1|CAD38611.1|  660|Homo sapiens hypothetical protein
           protein.
          Length = 660

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = -3

Query: 271 DKYKVKTKIEQQN*LSLRSDYWKTIVSRVLSTPAKCEGST*NQRAYTS 128
           ++++ K++ E Q  L  RS   K IVS+ +ST  K    T NQR + S
Sbjct: 120 NEWQNKSEFEGQQGLKERSISQKKIVSKKMSTDRKRPSFTLNQRIHNS 167


>AL832100-1|CAD91161.1|  628|Homo sapiens hypothetical protein
           protein.
          Length = 628

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = -3

Query: 271 DKYKVKTKIEQQN*LSLRSDYWKTIVSRVLSTPAKCEGST*NQRAYTS 128
           ++++ K++ E Q  L  RS   K IVS+ +ST  K    T NQR + S
Sbjct: 88  NEWQNKSEFEGQQGLKERSISQKKIVSKKMSTDRKRPSFTLNQRIHNS 135


>AK131388-1|BAD18539.1|  637|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16465 fis, clone BRHIP2017553, weakly  similar
           to Zinc finger protein 184. ).
          Length = 637

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = -3

Query: 271 DKYKVKTKIEQQN*LSLRSDYWKTIVSRVLSTPAKCEGST*NQRAYTS 128
           ++++ K++ E Q  L  RS   K IVS+ +ST  K    T NQR + S
Sbjct: 97  NEWQNKSEFEGQQGLKERSISQKKIVSKKMSTDRKRPSFTLNQRIHNS 144


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,749,013
Number of Sequences: 237096
Number of extensions: 1433875
Number of successful extensions: 2958
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2958
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)