Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24k12
(272 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022780-1|AAY55196.1| 617|Drosophila melanogaster IP14063p pro... 30 0.38
AE014134-2818|AAN10980.1| 1077|Drosophila melanogaster CG31784-P... 30 0.38
AE014134-2817|AAN10979.1| 1078|Drosophila melanogaster CG31784-P... 30 0.38
AE013599-2204|AAF58051.2| 1419|Drosophila melanogaster CG18243-P... 29 0.67
AE014134-1754|AAF52849.2| 1317|Drosophila melanogaster CG13131-P... 28 1.5
AE014296-864|AAF47914.1| 487|Drosophila melanogaster CG13720-PA... 27 2.7
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 27 3.6
M64621-1|AAA28843.1| 220|Drosophila melanogaster rab3 protein. 27 3.6
AY060449-1|AAL25488.1| 220|Drosophila melanogaster LP05860p pro... 27 3.6
AE013599-1159|AAF58762.1| 220|Drosophila melanogaster CG7576-PA... 27 3.6
AB112932-1|BAD07037.1| 220|Drosophila melanogaster Rab3 protein. 27 3.6
AY070966-1|AAL48588.1| 590|Drosophila melanogaster RE06471p pro... 27 4.7
AE014296-2567|AAF49587.1| 590|Drosophila melanogaster CG7297-PA... 27 4.7
>BT022780-1|AAY55196.1| 617|Drosophila melanogaster IP14063p
protein.
Length = 617
Score = 30.3 bits (65), Expect = 0.38
Identities = 19/78 (24%), Positives = 39/78 (50%)
Frame = +3
Query: 39 HRVDIINMDQFEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSVEIYGI 218
+ + + N+ EQ + L+ ++K DE S ++ + +K K LE L Y +
Sbjct: 414 NEIHMTNVAMVEQFLT-GLINEVVK--YDERTSVRLRRLLDKEKMLEELYLLVIDYQYEM 470
Query: 219 HDNRLNNKKIRNYYLKKK 272
H N+ + + +YY+++K
Sbjct: 471 HRNQALERSVADYYVRRK 488
>AE014134-2818|AAN10980.1| 1077|Drosophila melanogaster CG31784-PB,
isoform B protein.
Length = 1077
Score = 30.3 bits (65), Expect = 0.38
Identities = 19/78 (24%), Positives = 39/78 (50%)
Frame = +3
Query: 39 HRVDIINMDQFEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSVEIYGI 218
+ + + N+ EQ + L+ ++K DE S ++ + +K K LE L Y +
Sbjct: 385 NEIHMTNVAMVEQFLT-GLINEVVK--YDERTSVRLRRLLDKEKMLEELYLLVIDYQYEM 441
Query: 219 HDNRLNNKKIRNYYLKKK 272
H N+ + + +YY+++K
Sbjct: 442 HRNQALERSVADYYVRRK 459
>AE014134-2817|AAN10979.1| 1078|Drosophila melanogaster CG31784-PA,
isoform A protein.
Length = 1078
Score = 30.3 bits (65), Expect = 0.38
Identities = 19/78 (24%), Positives = 39/78 (50%)
Frame = +3
Query: 39 HRVDIINMDQFEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSVEIYGI 218
+ + + N+ EQ + L+ ++K DE S ++ + +K K LE L Y +
Sbjct: 385 NEIHMTNVAMVEQFLT-GLINEVVK--YDERTSVRLRRLLDKEKMLEELYLLVIDYQYEM 441
Query: 219 HDNRLNNKKIRNYYLKKK 272
H N+ + + +YY+++K
Sbjct: 442 HRNQALERSVADYYVRRK 459
>AE013599-2204|AAF58051.2| 1419|Drosophila melanogaster CG18243-PA
protein.
Length = 1419
Score = 29.5 bits (63), Expect = 0.67
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 141 NIKSMSEKLKRLECDNLTDSVEIYGIHDNRLNNKKIRNYYLKK 269
N++ ++ +K E L D E+ +HD +K+ +YY KK
Sbjct: 1199 NVRGLTVTIKSKEVLELYDRTELTVVHDKYGLKEKVIHYYFKK 1241
>AE014134-1754|AAF52849.2| 1317|Drosophila melanogaster CG13131-PA
protein.
Length = 1317
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 75 QLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSVE 206
Q N S L + IK QID+++ IK + K +L +DSVE
Sbjct: 966 QKYNHSKLSNAIKKQIDKSLQQKIKKIMTKPIKLLKSTDSDSVE 1009
>AE014296-864|AAF47914.1| 487|Drosophila melanogaster CG13720-PA
protein.
Length = 487
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +3
Query: 93 LLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSVEIYGIHDNRLNNKKIR 251
LLK+ + DE V++ +K S CDN ++ HD +K++
Sbjct: 237 LLKNATQYLPDEGVTNEVKRSSICSNATNCDNRRRRQRLFKQHDKSAEREKLK 289
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +3
Query: 57 NMDQFEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSVEIYGIHDNRLN 236
++ F+ +I + LLK T +N + NI + E ++ L CD++ + + N+++
Sbjct: 90 SLSSFDAIIGLDLLKQGNATLDFKNKTLNINNEVESIQFLRCDSVNFANIENIVVPNQIS 149
Query: 237 NK 242
NK
Sbjct: 150 NK 151
>M64621-1|AAA28843.1| 220|Drosophila melanogaster rab3 protein.
Length = 220
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = +3
Query: 51 IINMDQFEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSVE 206
+I+ ++ QL + L +T ENV N+K++ E+L + CD +++S++
Sbjct: 143 VISFERGRQLAD-QLGVEFFETSAKENV--NVKAVFERLVDIICDKMSESLD 191
>AY060449-1|AAL25488.1| 220|Drosophila melanogaster LP05860p
protein.
Length = 220
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = +3
Query: 51 IINMDQFEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSVE 206
+I+ ++ QL + L +T ENV N+K++ E+L + CD +++S++
Sbjct: 143 VISFERGRQLAD-QLGVEFFETSAKENV--NVKAVFERLVDIICDKMSESLD 191
>AE013599-1159|AAF58762.1| 220|Drosophila melanogaster CG7576-PA
protein.
Length = 220
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = +3
Query: 51 IINMDQFEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSVE 206
+I+ ++ QL + L +T ENV N+K++ E+L + CD +++S++
Sbjct: 143 VISFERGRQLAD-QLGVEFFETSAKENV--NVKAVFERLVDIICDKMSESLD 191
>AB112932-1|BAD07037.1| 220|Drosophila melanogaster Rab3 protein.
Length = 220
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = +3
Query: 51 IINMDQFEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSVE 206
+I+ ++ QL + L +T ENV N+K++ E+L + CD +++S++
Sbjct: 143 VISFERGRQLAD-QLGVEFFETSAKENV--NVKAVFERLVDIICDKMSESLD 191
>AY070966-1|AAL48588.1| 590|Drosophila melanogaster RE06471p
protein.
Length = 590
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -1
Query: 140 VRHVFVDLRFDQRLEQRHVNQLFKLIHINYINPMRIWCVKY 18
V H+F D F R + N KLI NY IW +Y
Sbjct: 348 VGHLFRDGNFQIRYTNKDKNSEKKLISRNYRRVAEIWLDEY 388
>AE014296-2567|AAF49587.1| 590|Drosophila melanogaster CG7297-PA
protein.
Length = 590
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -1
Query: 140 VRHVFVDLRFDQRLEQRHVNQLFKLIHINYINPMRIWCVKY 18
V H+F D F R + N KLI NY IW +Y
Sbjct: 348 VGHLFRDGNFQIRYTNKDKNSEKKLISRNYRRVAEIWLDEY 388
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,761,993
Number of Sequences: 53049
Number of extensions: 114959
Number of successful extensions: 507
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 24,988,368
effective HSP length: 69
effective length of database: 21,327,987
effective search space used: 447887727
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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