Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24k04
(238 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC104927-1|AAI04928.1| 137|Homo sapiens keratin associated prot... 29 3.5
BC104925-1|AAI04926.1| 137|Homo sapiens keratin associated prot... 29 3.5
AB096942-1|BAE46357.1| 137|Homo sapiens keratin associated prot... 29 3.5
AL590438-3|CAH71530.1| 1276|Homo sapiens PR domain containing 16... 27 8.0
AL590438-2|CAH71529.1| 1257|Homo sapiens PR domain containing 16... 27 8.0
AL590438-1|CAH71531.1| 1276|Homo sapiens PR domain containing 16... 27 8.0
AL512383-3|CAH71134.1| 1276|Homo sapiens PR domain containing 16... 27 8.0
AL512383-2|CAH71133.1| 1257|Homo sapiens PR domain containing 16... 27 8.0
AL512383-1|CAH71132.1| 1276|Homo sapiens PR domain containing 16... 27 8.0
AL354743-3|CAI22790.1| 1276|Homo sapiens PR domain containing 16... 27 8.0
AL354743-2|CAI22789.1| 1257|Homo sapiens PR domain containing 16... 27 8.0
AL354743-1|CAI22788.1| 1276|Homo sapiens PR domain containing 16... 27 8.0
AL008733-3|CAI19629.1| 1276|Homo sapiens PR domain containing 16... 27 8.0
AL008733-2|CAI19631.1| 1257|Homo sapiens PR domain containing 16... 27 8.0
AL008733-1|CAI19630.1| 1276|Homo sapiens PR domain containing 16... 27 8.0
AF294278-1|AAG33382.1| 1276|Homo sapiens PR-domain-containing pr... 27 8.0
AB078876-1|BAB84297.1| 1257|Homo sapiens transcription factor ME... 27 8.0
AB051462-1|BAB21766.2| 1286|Homo sapiens KIAA1675 protein protein. 27 8.0
>BC104927-1|AAI04928.1| 137|Homo sapiens keratin associated protein
15-1 protein.
Length = 137
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 230 GKSSTNNCXQ*MCSATGRQTSKAFAKSKRTLRKCP 126
G S N C + C T QTS A+S +T CP
Sbjct: 44 GSSLYNGCQETYCEPTSCQTSCTLARSYQTSCYCP 78
>BC104925-1|AAI04926.1| 137|Homo sapiens keratin associated protein
15-1 protein.
Length = 137
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 230 GKSSTNNCXQ*MCSATGRQTSKAFAKSKRTLRKCP 126
G S N C + C T QTS A+S +T CP
Sbjct: 44 GSSLYNGCQETYCEPTSCQTSCTLARSYQTSCYCP 78
>AB096942-1|BAE46357.1| 137|Homo sapiens keratin associated protein
protein.
Length = 137
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 230 GKSSTNNCXQ*MCSATGRQTSKAFAKSKRTLRKCP 126
G S N C + C T QTS A+S +T CP
Sbjct: 44 GSSLYNGCQETYCEPTSCQTSCTLARSYQTSCYCP 78
>AL590438-3|CAH71530.1| 1276|Homo sapiens PR domain containing 16
protein.
Length = 1276
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 181 VGKRARRSQNQNGRSVNVHHVF 116
+G RAR SQN GR +HV+
Sbjct: 808 IGSRARASQNGGGREPRKNHVY 829
>AL590438-2|CAH71529.1| 1257|Homo sapiens PR domain containing 16
protein.
Length = 1257
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 181 VGKRARRSQNQNGRSVNVHHVF 116
+G RAR SQN GR +HV+
Sbjct: 807 IGSRARASQNGGGREPRKNHVY 828
>AL590438-1|CAH71531.1| 1276|Homo sapiens PR domain containing 16
protein.
Length = 1276
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 181 VGKRARRSQNQNGRSVNVHHVF 116
+G RAR SQN GR +HV+
Sbjct: 807 IGSRARASQNGGGREPRKNHVY 828
>AL512383-3|CAH71134.1| 1276|Homo sapiens PR domain containing 16
protein.
Length = 1276
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 181 VGKRARRSQNQNGRSVNVHHVF 116
+G RAR SQN GR +HV+
Sbjct: 808 IGSRARASQNGGGREPRKNHVY 829
>AL512383-2|CAH71133.1| 1257|Homo sapiens PR domain containing 16
protein.
Length = 1257
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 181 VGKRARRSQNQNGRSVNVHHVF 116
+G RAR SQN GR +HV+
Sbjct: 807 IGSRARASQNGGGREPRKNHVY 828
>AL512383-1|CAH71132.1| 1276|Homo sapiens PR domain containing 16
protein.
Length = 1276
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 181 VGKRARRSQNQNGRSVNVHHVF 116
+G RAR SQN GR +HV+
Sbjct: 807 IGSRARASQNGGGREPRKNHVY 828
>AL354743-3|CAI22790.1| 1276|Homo sapiens PR domain containing 16
protein.
Length = 1276
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 181 VGKRARRSQNQNGRSVNVHHVF 116
+G RAR SQN GR +HV+
Sbjct: 808 IGSRARASQNGGGREPRKNHVY 829
>AL354743-2|CAI22789.1| 1257|Homo sapiens PR domain containing 16
protein.
Length = 1257
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 181 VGKRARRSQNQNGRSVNVHHVF 116
+G RAR SQN GR +HV+
Sbjct: 807 IGSRARASQNGGGREPRKNHVY 828
>AL354743-1|CAI22788.1| 1276|Homo sapiens PR domain containing 16
protein.
Length = 1276
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 181 VGKRARRSQNQNGRSVNVHHVF 116
+G RAR SQN GR +HV+
Sbjct: 807 IGSRARASQNGGGREPRKNHVY 828
>AL008733-3|CAI19629.1| 1276|Homo sapiens PR domain containing 16
protein.
Length = 1276
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 181 VGKRARRSQNQNGRSVNVHHVF 116
+G RAR SQN GR +HV+
Sbjct: 808 IGSRARASQNGGGREPRKNHVY 829
>AL008733-2|CAI19631.1| 1257|Homo sapiens PR domain containing 16
protein.
Length = 1257
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 181 VGKRARRSQNQNGRSVNVHHVF 116
+G RAR SQN GR +HV+
Sbjct: 807 IGSRARASQNGGGREPRKNHVY 828
>AL008733-1|CAI19630.1| 1276|Homo sapiens PR domain containing 16
protein.
Length = 1276
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 181 VGKRARRSQNQNGRSVNVHHVF 116
+G RAR SQN GR +HV+
Sbjct: 807 IGSRARASQNGGGREPRKNHVY 828
>AF294278-1|AAG33382.1| 1276|Homo sapiens PR-domain-containing
protein 16 protein.
Length = 1276
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 181 VGKRARRSQNQNGRSVNVHHVF 116
+G RAR SQN GR +HV+
Sbjct: 808 IGSRARASQNGGGREPRKNHVY 829
>AB078876-1|BAB84297.1| 1257|Homo sapiens transcription factor MEL1
protein.
Length = 1257
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 181 VGKRARRSQNQNGRSVNVHHVF 116
+G RAR SQN GR +HV+
Sbjct: 807 IGSRARASQNGGGREPRKNHVY 828
>AB051462-1|BAB21766.2| 1286|Homo sapiens KIAA1675 protein protein.
Length = 1286
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 181 VGKRARRSQNQNGRSVNVHHVF 116
+G RAR SQN GR +HV+
Sbjct: 817 IGSRARASQNGGGREPRKNHVY 838
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,124,954
Number of Sequences: 237096
Number of extensions: 543761
Number of successful extensions: 1089
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 76,859,062
effective HSP length: 57
effective length of database: 63,344,590
effective search space used: 1330236390
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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