Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24j04
(264 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0350 + 2534422-2535615 31 0.17
02_01_0344 + 2467191-2468282 29 0.51
01_04_0113 - 16133794-16134933,16135030-16135611,16135698-16135853 28 1.2
02_05_0300 + 27681204-27681656,27681745-27681840,27681933-276820... 27 2.1
01_01_0012 + 71903-72935,73468-73981,74619-76008 27 2.1
11_05_0087 + 18970741-18972702 26 3.6
06_01_1013 - 7931756-7935109 26 3.6
06_01_0493 - 3536207-3537056,3537603-3537826,3538234-3538503,353... 26 3.6
03_01_0563 + 4169144-4169516,4170362-4170648,4171339-4171576,417... 26 3.6
07_01_0217 + 1620625-1621419,1621982-1622152,1622581-1622865,162... 26 4.8
01_06_0456 + 29521282-29522064 26 4.8
09_02_0409 - 8656136-8656318,8656469-8656609,8658608-8658756,865... 25 6.3
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 25 6.3
05_04_0028 + 17302359-17302445,17303887-17303952,17305415-173054... 25 6.3
05_01_0071 + 482765-482825,483562-483776,484115-484693 25 6.3
02_05_0141 + 26225644-26225880 25 6.3
01_06_1198 + 35341375-35341635,35341750-35341953,35342151-353427... 25 6.3
01_03_0258 + 14309549-14309926 25 6.3
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 25 8.3
07_03_0845 - 21979581-21981281 25 8.3
06_02_0221 - 13209197-13209247,13209605-13209893,13209976-132101... 25 8.3
05_03_0626 - 16335816-16335917,16336331-16336558,16336694-163369... 25 8.3
05_03_0193 + 9543565-9543691,9544016-9544202,9544956-9545352 25 8.3
03_02_0630 + 9964593-9964738,9965548-9965603,9965895-9966745,996... 25 8.3
01_07_0170 - 41670694-41671634,41672014-41672982,41673050-41673605 25 8.3
01_05_0596 + 23511148-23512650 25 8.3
>06_01_0350 + 2534422-2535615
Length = 397
Score = 30.7 bits (66), Expect = 0.17
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 85 PWNSNAQAEKKTLPGPLGGVFRP 17
PW S+A+ E+K LP PL +F P
Sbjct: 42 PWRSSARLERKLLPPPLPWLFLP 64
>02_01_0344 + 2467191-2468282
Length = 363
Score = 29.1 bits (62), Expect = 0.51
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -2
Query: 257 FTRGSSPWRPAADMGTNRRDISTYIPHLNFQGPQRVSG 144
F G W+ +GT R+ S + P N++GP RV G
Sbjct: 291 FQVGDLVWKTILPLGTRSRESSKWSP--NWEGPYRVCG 326
>01_04_0113 - 16133794-16134933,16135030-16135611,16135698-16135853
Length = 625
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -1
Query: 222 GYGYEPARHLHVHPSPEFSRSAES-IRTPPQMRCSSRSEPYLPSI 91
G+ P+ H P P+ S R PP R S RSE P +
Sbjct: 26 GFDVTPSPHAEPSPRPQLRHDNPSRSRVPPLERVSRRSEVVFPPL 70
>02_05_0300 +
27681204-27681656,27681745-27681840,27681933-27682022,
27682126-27682227,27682310-27682456,27683608-27683748,
27683749-27683808,27685133-27685230,27685308-27685410,
27685954-27686037
Length = 457
Score = 27.1 bits (57), Expect = 2.1
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +2
Query: 95 EGRYGSEREEHRICGGVRILSADLENSGEGCT-WRC-RAGSYPYP 223
+GR+G++R HR+ G +A SG+ C WR R +P P
Sbjct: 6 DGRFGNKRVHHRL--GPANGAASSSTSGKVCIHWRAGRCNRFPCP 48
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 183 PSPEFSRSAESIRTPPQMRCSSRSEPYLPSI 91
PSP RS R+P + R S RS Y P +
Sbjct: 518 PSPSARRSKSRSRSPIKYRRSRRSRSYSPPV 548
>11_05_0087 + 18970741-18972702
Length = 653
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 71 VRVPWNPIEGRYGSEREEHR 130
VR P P+ GR+G RE R
Sbjct: 56 VRAPRRPLHGRHGHHREHRR 75
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 26.2 bits (55), Expect = 3.6
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -1
Query: 216 GYEPARHLHVHPSPEFSRSAESIRTPP 136
G+EP R + +HP+P+ A + + P
Sbjct: 879 GWEPKRFITIHPTPKSKAPARILGSKP 905
>06_01_0493 -
3536207-3537056,3537603-3537826,3538234-3538503,
3539042-3539146
Length = 482
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -1
Query: 216 GYEPARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEP 106
GY P + P P++ + TP Q + SS +P
Sbjct: 427 GYMPPPRMPYPPPPQYPPYQPMLATPAQSQASSSQQP 463
>03_01_0563 +
4169144-4169516,4170362-4170648,4171339-4171576,
4172473-4172796,4172914-4172999,4173124-4173231,
4173315-4173619,4173733-4173960,4174109-4174877
Length = 905
Score = 26.2 bits (55), Expect = 3.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 156 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQK 58
+S R P R ++PYLPS G R LR+K
Sbjct: 205 QSTRELPTKRVFFSNKPYLPSETPPGLRELREK 237
>07_01_0217 +
1620625-1621419,1621982-1622152,1622581-1622865,
1623113-1623262
Length = 466
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 114 NAKSTAFAAVSGYSLRTLKIQVRDVRGDVAPVRTHI 221
+A S A++GYS TL++ DV G V TH+
Sbjct: 17 SAVSLVDGALAGYSAPTLRLLDIDVPGARLAVATHV 52
>01_06_0456 + 29521282-29522064
Length = 260
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 72 TLRQKRKLFPDLSAASSGHFGLPR 1
TLR+ ++FP +S++ G FG+ R
Sbjct: 171 TLRRHHQVFPHISSSCQGCFGVRR 194
>09_02_0409 -
8656136-8656318,8656469-8656609,8658608-8658756,
8658830-8658987,8659326-8659409,8659654-8659787,
8661255-8661389,8662159-8662551
Length = 458
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -3
Query: 136 ANAVLFAFRTISPFYRIPWNSNAQAEKKTLPGP 38
+ V F TIS +I W S KK+ P P
Sbjct: 264 SRGVAATFSTISSLSKIIWRSEPSPTKKSRPKP 296
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 224 ADMGTNRRDISTYIPHLNFQGPQRVSGHRRKCGALRVP 111
A + T+ +DI+T ++ P + G RRK G+ R P
Sbjct: 2094 ASLHTSGKDITTMPSEVDSGAPSKAPGRRRK-GSAREP 2130
>05_04_0028 +
17302359-17302445,17303887-17303952,17305415-17305489,
17305638-17305737,17305819-17305865,17305937-17305994,
17306161-17306210,17306417-17306473,17306561-17306703,
17306793-17306834,17307083-17307124,17308239-17308272,
17308342-17308443,17310373-17310652,17311202-17311332,
17311676-17311773,17312525-17312717
Length = 534
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 183 PSPEFSRSAESIRTPPQMRCSSRSEP 106
P E SRSA R+P + R SRS P
Sbjct: 238 PVKERSRSASQSRSPVKERSPSRSPP 263
>05_01_0071 + 482765-482825,483562-483776,484115-484693
Length = 284
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +2
Query: 65 LSVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEG 184
L++ + P+ RE+HR+ G + +LS +++S G
Sbjct: 17 LALDTQYGPMRFTDSIIREDHRLTGSLNVLSLKVKSSDVG 56
>02_05_0141 + 26225644-26225880
Length = 78
Score = 25.4 bits (53), Expect = 6.3
Identities = 9/29 (31%), Positives = 12/29 (41%)
Frame = +2
Query: 107 GSEREEHRICGGVRILSADLENSGEGCTW 193
G R HR C +++ D E TW
Sbjct: 22 GEPRRSHRACNAAPVVARDREEGKPRATW 50
>01_06_1198 +
35341375-35341635,35341750-35341953,35342151-35342737,
35342825-35342986,35343096-35343549
Length = 555
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -1
Query: 192 HVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPS 94
H H P SA R P ++ S PYLP+
Sbjct: 439 HNHDVPAARGSAALYRPAPPAAAATSSHPYLPN 471
>01_03_0258 + 14309549-14309926
Length = 125
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 38 RSGKSFLFCLSVRVPWNPIEGRYGSEREEHRICG 139
R G S++ + R P++ E RYG+ R+ + +CG
Sbjct: 42 RMGSSYVDDMRRRPPFS--EARYGAARKVYVVCG 73
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 25.0 bits (52), Expect = 8.3
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -1
Query: 207 PARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSI 91
P RH HP P A R PP M + R LP +
Sbjct: 230 PHRHPAAHPPPPPHHPAP--RPPPPMAAAPRQPAALPPV 266
>07_03_0845 - 21979581-21981281
Length = 566
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 50 SFLFCLSVRVPWNPIEGRYGSEREEHRIC 136
+FL +++VP NP++ SE E IC
Sbjct: 362 AFLKIANIKVPGNPMQLNVQSEEECRSIC 390
>06_02_0221 -
13209197-13209247,13209605-13209893,13209976-13210146,
13210257-13211110,13211197-13211643,13211722-13212021,
13212130-13212450
Length = 810
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 119 EEHRICGGVRILSADLENSGEGCTWRC 199
E+ R+ ++ L AD + S E C+ RC
Sbjct: 199 EDQRVYEAIKELVADQQASQEACSQRC 225
>05_03_0626 -
16335816-16335917,16336331-16336558,16336694-16336973,
16337596-16338560
Length = 524
Score = 25.0 bits (52), Expect = 8.3
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = -1
Query: 207 PARHLH--VHPS-PEFSRSAESIR--TPPQMRCSSRSEPYLP 97
PARH + PS P F +R PP RCS+ PY P
Sbjct: 97 PARHCSTPLSPSSPPFQPRGLLVRWAPPPAPRCSTPLSPYSP 138
>05_03_0193 + 9543565-9543691,9544016-9544202,9544956-9545352
Length = 236
Score = 25.0 bits (52), Expect = 8.3
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -2
Query: 188 YIPHLNFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQA 18
+I LN+ G ++GH+R+ + P H + + + LE R +N S R L +
Sbjct: 101 HITRLNYAGTSLLAGHQRES---QTPAHFNCI-HVVGLEERMRVKNGSSLPRTSLSS 153
>03_02_0630 +
9964593-9964738,9965548-9965603,9965895-9966745,
9966848-9967046,9967246-9967425,9967591-9967967,
9968625-9968765
Length = 649
Score = 25.0 bits (52), Expect = 8.3
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = -1
Query: 174 EFSRSAESIRTPPQMRCSSRSEPYLP----SIGFHGTRTLRQKR 55
E ++E + PP+ + S+ SEP +P S + +R+L Q R
Sbjct: 126 EAGGTSEKTKRPPKAKPSTPSEPIVPIRRSSFSYTPSRSLGQSR 169
>01_07_0170 - 41670694-41671634,41672014-41672982,41673050-41673605
Length = 821
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -3
Query: 247 ALHLGDLLRIWVRTGATSPRTSLT*IFKVRREY 149
AL G R WV ATS + +F + EY
Sbjct: 178 ALRRGHCRRFWVMAKATSTNNAFLSVFNLDMEY 210
>01_05_0596 + 23511148-23512650
Length = 500
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 2 RGNPKWPEDAAERSGKSFLFCL 67
RG+ +P + R G+SF +CL
Sbjct: 277 RGSLSFPSQISRRFGRSFSYCL 298
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,036,648
Number of Sequences: 37544
Number of extensions: 161078
Number of successful extensions: 651
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 14,793,348
effective HSP length: 66
effective length of database: 12,315,444
effective search space used: 258624324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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