Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24j04
(264 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 1.5
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 2.6
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 2.6
DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein. 21 3.4
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 21 3.4
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 3.4
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 20 4.5
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 20 4.5
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 20 4.5
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 20 4.5
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 19 7.8
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 19 7.8
AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. 19 7.8
AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta... 19 7.8
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 19 7.8
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 19 7.8
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 19 7.8
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 1.5
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -1
Query: 114 SEPYLPSIGFHGTRTLRQKRKLFPDLSA 31
SE P+ HG R RQ+ + D +
Sbjct: 472 SENNYPTTSIHGDRLQRQREEALADFKS 499
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.0 bits (42), Expect = 2.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 91 RIPWNSNAQAEKKTLPGPLG 32
+IPW+ N +A K G G
Sbjct: 334 QIPWDKNVEALAKWANGQTG 353
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 21.0 bits (42), Expect = 2.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 45 PDLSAASSGHFGLP 4
PDL+ S G GLP
Sbjct: 336 PDLAGTSQGSAGLP 349
>DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein.
Length = 135
Score = 20.6 bits (41), Expect = 3.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +3
Query: 141 VSGYSLRTLKIQVRDVR 191
V+ ++ LKIQ+RDV+
Sbjct: 14 VNAMTIEELKIQLRDVQ 30
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 20.6 bits (41), Expect = 3.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 239 PWRPAADMGTNRRDISTYIPHLNF 168
P+RP+ GT +DI+ + LNF
Sbjct: 285 PFRPS---GTVLKDINRQVDELNF 305
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 20.6 bits (41), Expect = 3.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 27 TPPRGPGRV 53
+PPRGPG V
Sbjct: 397 SPPRGPGGV 405
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 20.2 bits (40), Expect = 4.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 211 VPISAAGLQGEEPLVKKK 264
+PISA L E ++KK+
Sbjct: 444 IPISACSLPCEPGMIKKQ 461
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 20.2 bits (40), Expect = 4.5
Identities = 9/33 (27%), Positives = 14/33 (42%)
Frame = -1
Query: 180 SPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFH 82
SP S + +R CS + P+ + FH
Sbjct: 331 SPMTSTKSTIVRNHLNSTCSVTNSPHQKKLRFH 363
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 20.2 bits (40), Expect = 4.5
Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +2
Query: 71 VRVPWNPIEGRYGSEREEHRICG-GVRILSADLENSGEGCTWRC 199
+R+ + I+ + G +C + A +GE C W C
Sbjct: 566 LRLNMSAIQFKLGHPEPPESVCSLPCEVGQAKKYVAGEQCCWHC 609
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 20.2 bits (40), Expect = 4.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 211 VPISAAGLQGEEPLVKKK 264
+PISA L E ++KK+
Sbjct: 534 IPISACSLPCEPGMIKKQ 551
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 19.4 bits (38), Expect = 7.8
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -3
Query: 49 LPGPLGGVFRPL 14
+PG LGG+F L
Sbjct: 337 MPGILGGIFGAL 348
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 19.4 bits (38), Expect = 7.8
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -1
Query: 138 PQMRCSSRSEPYLPSIGFH 82
P C + YLPS G H
Sbjct: 230 PTFLCKGDGKWYLPSGGCH 248
>AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein.
Length = 145
Score = 19.4 bits (38), Expect = 7.8
Identities = 6/15 (40%), Positives = 8/15 (53%)
Frame = -1
Query: 228 CCGYGYEPARHLHVH 184
CC Y RH+ +H
Sbjct: 93 CCRESYLKERHITLH 107
>AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta
protein precursor protein.
Length = 145
Score = 19.4 bits (38), Expect = 7.8
Identities = 6/15 (40%), Positives = 8/15 (53%)
Frame = -1
Query: 228 CCGYGYEPARHLHVH 184
CC Y RH+ +H
Sbjct: 93 CCRESYLKERHITLH 107
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 19.4 bits (38), Expect = 7.8
Identities = 9/41 (21%), Positives = 18/41 (43%)
Frame = -3
Query: 145 DTAANAVLFAFRTISPFYRIPWNSNAQAEKKTLPGPLGGVF 23
D ++ ++ A I FY P + + K+ P P ++
Sbjct: 198 DFGSSVLIGAPNEIDKFYGTPGYTAPEVIKQNRPTPAADIY 238
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 19.4 bits (38), Expect = 7.8
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -1
Query: 93 IGFHGTRTLRQKRKLFPDLSAASSGHFG 10
+GFHG R R ++ S+ FG
Sbjct: 257 MGFHGMRGKRDAAGIYGSNSSTVGTIFG 284
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 19.4 bits (38), Expect = 7.8
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -1
Query: 93 IGFHGTRTLRQKRKLFPDLSAASSGHFG 10
+GFHG R R ++ S+ FG
Sbjct: 257 MGFHGMRGKRDAAGIYGSNSSTVGTIFG 284
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,986
Number of Sequences: 438
Number of extensions: 1709
Number of successful extensions: 18
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 4887441
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
- SilkBase 1999-2023 -