Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24i17
(635 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC015941-1|AAH15941.1| 180|Homo sapiens nuclear import 7 homolo... 284 2e-76
AF132971-1|AAD27746.1| 180|Homo sapiens CGI-37 protein protein. 284 2e-76
AB112439-1|BAD05056.1| 180|Homo sapiens hypothetical protein pr... 284 2e-76
AB062479-1|BAB93504.1| 180|Homo sapiens OK/SW-CL.78 protein. 284 2e-76
AB062398-1|BAB93485.1| 180|Homo sapiens OK/SW-cl.76 protein. 284 2e-76
BC126472-1|AAI26473.1| 452|Homo sapiens tripartite motif-contai... 31 4.5
BC126470-1|AAI26471.1| 452|Homo sapiens tripartite motif-contai... 31 4.5
BC075020-1|AAH75020.1| 452|Homo sapiens ring finger protein 18 ... 31 4.5
BC075019-1|AAH75019.1| 452|Homo sapiens tripartite motif-contai... 31 4.5
AB037682-1|BAB03503.1| 452|Homo sapiens testis-specific RING Fi... 31 4.5
>BC015941-1|AAH15941.1| 180|Homo sapiens nuclear import 7 homolog
(S. cerevisiae) protein.
Length = 180
Score = 284 bits (696), Expect = 2e-76
Identities = 119/180 (66%), Positives = 155/180 (86%)
Frame = +1
Query: 88 MKVLSEDRTRILFEKLTKYIGVNVKLLIDRPDGTYCFREKKDRVYYISEKLLHLAQTVKP 267
M+ L+E+ TR++FEK+ KYIG N++LL+DRPDGTYCFR DRVYY+SEK++ LA +
Sbjct: 1 MRPLTEEETRVMFEKIAKYIGENLQLLVDRPDGTYCFRLHNDRVYYVSEKIMKLAANISG 60
Query: 268 DNLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGR 447
D LVS GTCFGKFTKT+KFRLH+TAL Y++PYA +KVW+KP AEQ FLYG+H++KSGLGR
Sbjct: 61 DKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAKYKVWIKPGAEQSFLYGNHVLKSGLGR 120
Query: 448 ITENTPKHQGVVVLTMSDIPIGFGVASRTTAECRHADPLATIVFHQADVGEYIRSEDTLT 627
ITENT ++QGVVV +M+DIP+GFGVA+++T +CR DP+A +VFHQAD+GEY+R E+TLT
Sbjct: 121 ITENTSQYQGVVVYSMADIPLGFGVAAKSTQDCRKVDPMAIVVFHQADIGEYVRHEETLT 180
>AF132971-1|AAD27746.1| 180|Homo sapiens CGI-37 protein protein.
Length = 180
Score = 284 bits (696), Expect = 2e-76
Identities = 119/180 (66%), Positives = 155/180 (86%)
Frame = +1
Query: 88 MKVLSEDRTRILFEKLTKYIGVNVKLLIDRPDGTYCFREKKDRVYYISEKLLHLAQTVKP 267
M+ L+E+ TR++FEK+ KYIG N++LL+DRPDGTYCFR DRVYY+SEK++ LA +
Sbjct: 1 MRPLTEEETRVMFEKIAKYIGENLQLLVDRPDGTYCFRLHNDRVYYVSEKIMKLAANISG 60
Query: 268 DNLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGR 447
D LVS GTCFGKFTKT+KFRLH+TAL Y++PYA +KVW+KP AEQ FLYG+H++KSGLGR
Sbjct: 61 DKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAKYKVWIKPGAEQSFLYGNHVLKSGLGR 120
Query: 448 ITENTPKHQGVVVLTMSDIPIGFGVASRTTAECRHADPLATIVFHQADVGEYIRSEDTLT 627
ITENT ++QGVVV +M+DIP+GFGVA+++T +CR DP+A +VFHQAD+GEY+R E+TLT
Sbjct: 121 ITENTSQYQGVVVYSMADIPLGFGVAAKSTQDCRKVDPMAIVVFHQADIGEYVRHEETLT 180
>AB112439-1|BAD05056.1| 180|Homo sapiens hypothetical protein
protein.
Length = 180
Score = 284 bits (696), Expect = 2e-76
Identities = 119/180 (66%), Positives = 155/180 (86%)
Frame = +1
Query: 88 MKVLSEDRTRILFEKLTKYIGVNVKLLIDRPDGTYCFREKKDRVYYISEKLLHLAQTVKP 267
M+ L+E+ TR++FEK+ KYIG N++LL+DRPDGTYCFR DRVYY+SEK++ LA +
Sbjct: 1 MRPLTEEETRVMFEKIAKYIGENLQLLVDRPDGTYCFRLHNDRVYYVSEKIMKLAANISG 60
Query: 268 DNLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGR 447
D LVS GTCFGKFTKT+KFRLH+TAL Y++PYA +KVW+KP AEQ FLYG+H++KSGLGR
Sbjct: 61 DKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAKYKVWIKPGAEQSFLYGNHVLKSGLGR 120
Query: 448 ITENTPKHQGVVVLTMSDIPIGFGVASRTTAECRHADPLATIVFHQADVGEYIRSEDTLT 627
ITENT ++QGVVV +M+DIP+GFGVA+++T +CR DP+A +VFHQAD+GEY+R E+TLT
Sbjct: 121 ITENTSQYQGVVVYSMADIPLGFGVAAKSTQDCRKVDPMAIVVFHQADIGEYVRHEETLT 180
>AB062479-1|BAB93504.1| 180|Homo sapiens OK/SW-CL.78 protein.
Length = 180
Score = 284 bits (696), Expect = 2e-76
Identities = 119/180 (66%), Positives = 155/180 (86%)
Frame = +1
Query: 88 MKVLSEDRTRILFEKLTKYIGVNVKLLIDRPDGTYCFREKKDRVYYISEKLLHLAQTVKP 267
M+ L+E+ TR++FEK+ KYIG N++LL+DRPDGTYCFR DRVYY+SEK++ LA +
Sbjct: 1 MRPLTEEETRVMFEKIAKYIGENLQLLVDRPDGTYCFRLHNDRVYYVSEKIMKLAANISG 60
Query: 268 DNLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGR 447
D LVS GTCFGKFTKT+KFRLH+TAL Y++PYA +KVW+KP AEQ FLYG+H++KSGLGR
Sbjct: 61 DKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAKYKVWIKPGAEQSFLYGNHVLKSGLGR 120
Query: 448 ITENTPKHQGVVVLTMSDIPIGFGVASRTTAECRHADPLATIVFHQADVGEYIRSEDTLT 627
ITENT ++QGVVV +M+DIP+GFGVA+++T +CR DP+A +VFHQAD+GEY+R E+TLT
Sbjct: 121 ITENTSQYQGVVVYSMADIPLGFGVAAKSTQDCRKVDPMAIVVFHQADIGEYVRHEETLT 180
>AB062398-1|BAB93485.1| 180|Homo sapiens OK/SW-cl.76 protein.
Length = 180
Score = 284 bits (696), Expect = 2e-76
Identities = 119/180 (66%), Positives = 155/180 (86%)
Frame = +1
Query: 88 MKVLSEDRTRILFEKLTKYIGVNVKLLIDRPDGTYCFREKKDRVYYISEKLLHLAQTVKP 267
M+ L+E+ TR++FEK+ KYIG N++LL+DRPDGTYCFR DRVYY+SEK++ LA +
Sbjct: 1 MRPLTEEETRVMFEKIAKYIGENLQLLVDRPDGTYCFRLHNDRVYYVSEKIMKLAANISG 60
Query: 268 DNLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGR 447
D LVS GTCFGKFTKT+KFRLH+TAL Y++PYA +KVW+KP AEQ FLYG+H++KSGLGR
Sbjct: 61 DKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAKYKVWIKPGAEQSFLYGNHVLKSGLGR 120
Query: 448 ITENTPKHQGVVVLTMSDIPIGFGVASRTTAECRHADPLATIVFHQADVGEYIRSEDTLT 627
ITENT ++QGVVV +M+DIP+GFGVA+++T +CR DP+A +VFHQAD+GEY+R E+TLT
Sbjct: 121 ITENTSQYQGVVVYSMADIPLGFGVAAKSTQDCRKVDPMAIVVFHQADIGEYVRHEETLT 180
>BC126472-1|AAI26473.1| 452|Homo sapiens tripartite
motif-containing 49 protein.
Length = 452
Score = 30.7 bits (66), Expect = 4.5
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 238 LLHLAQTVKPDNLVSAGTCFGKFTKTNKFRLHIT 339
LLH+ Q + P+ +SAG G + N+FR+HIT
Sbjct: 259 LLHMPQPLNPE--LSAGPITGLRDRLNQFRVHIT 290
>BC126470-1|AAI26471.1| 452|Homo sapiens tripartite
motif-containing 49 protein.
Length = 452
Score = 30.7 bits (66), Expect = 4.5
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 238 LLHLAQTVKPDNLVSAGTCFGKFTKTNKFRLHIT 339
LLH+ Q + P+ +SAG G + N+FR+HIT
Sbjct: 259 LLHMPQPLNPE--LSAGPITGLRDRLNQFRVHIT 290
>BC075020-1|AAH75020.1| 452|Homo sapiens ring finger protein 18
protein.
Length = 452
Score = 30.7 bits (66), Expect = 4.5
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 238 LLHLAQTVKPDNLVSAGTCFGKFTKTNKFRLHIT 339
LLH+ Q + P+ +SAG G + N+FR+HIT
Sbjct: 259 LLHMPQPLNPE--LSAGPITGLRDRLNQFRVHIT 290
>BC075019-1|AAH75019.1| 452|Homo sapiens tripartite
motif-containing 49 protein.
Length = 452
Score = 30.7 bits (66), Expect = 4.5
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 238 LLHLAQTVKPDNLVSAGTCFGKFTKTNKFRLHIT 339
LLH+ Q + P+ +SAG G + N+FR+HIT
Sbjct: 259 LLHMPQPLNPE--LSAGPITGLRDRLNQFRVHIT 290
>AB037682-1|BAB03503.1| 452|Homo sapiens testis-specific RING
Finger protein protein.
Length = 452
Score = 30.7 bits (66), Expect = 4.5
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 238 LLHLAQTVKPDNLVSAGTCFGKFTKTNKFRLHIT 339
LLH+ Q + P+ +SAG G + N+FR+HIT
Sbjct: 259 LLHMPQPLNPE--LSAGPITGLRDRLNQFRVHIT 290
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,200,179
Number of Sequences: 237096
Number of extensions: 1984639
Number of successful extensions: 5063
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5062
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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