Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24i17
         (635 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80437-17|AAB37628.1|  180|Caenorhabditis elegans Hypothetical p...   230   7e-61
AL132862-18|CAB70230.2|  481|Caenorhabditis elegans Hypothetical...    30   1.2  
AL110490-11|CAB54452.1|  620|Caenorhabditis elegans Hypothetical...    28   4.9  
AF100672-1|AAC68997.2|  334|Caenorhabditis elegans Hypothetical ...    28   6.4  
AC024779-4|AAK68484.1|  439|Caenorhabditis elegans Hypothetical ...    28   6.4  
AC024202-10|AAF36032.1|  327|Caenorhabditis elegans Hypothetical...    28   6.4  
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr...    27   8.5  
Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p...    27   8.5  
Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical pr...    27   8.5  
U53336-1|AAA96174.1|  158|Caenorhabditis elegans Temporarily ass...    27   8.5  
AF303253-1|AAG50211.1|  158|Caenorhabditis elegans tissue inhibi...    27   8.5  

>U80437-17|AAB37628.1|  180|Caenorhabditis elegans Hypothetical
           protein C43E11.9 protein.
          Length = 180

 Score =  230 bits (562), Expect = 7e-61
 Identities = 99/179 (55%), Positives = 137/179 (76%)
 Frame = +1

Query: 88  MKVLSEDRTRILFEKLTKYIGVNVKLLIDRPDGTYCFREKKDRVYYISEKLLHLAQTVKP 267
           M+ L+E+ T ++F KL  +IG NV +LIDR DG YCFR  K+RVYY SE L+  A  +  
Sbjct: 1   MRPLTEEETSLVFAKLASFIGDNVSMLIDRNDGDYCFRNHKERVYYCSENLMRQAACIAR 60

Query: 268 DNLVSAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHHIIKSGLGR 447
           + L+S GTC GKFTK+ KF L ITAL Y++PYA FKVW+KP+AEQQFLYG++I+KSG+ R
Sbjct: 61  EPLLSFGTCLGKFTKSKKFHLQITALDYLAPYAKFKVWLKPNAEQQFLYGNNILKSGIAR 120

Query: 448 ITENTPKHQGVVVLTMSDIPIGFGVASRTTAECRHADPLATIVFHQADVGEYIRSEDTL 624
           +T+ TP H G+VV +M+D+P+GFGV+++ T++ + ADP A +V HQ D+GEY+R+E  L
Sbjct: 121 MTDGTPTHAGIVVYSMTDVPLGFGVSAKGTSDSKRADPTALVVLHQCDLGEYLRNESHL 179


>AL132862-18|CAB70230.2|  481|Caenorhabditis elegans Hypothetical
           protein Y73F8A.24 protein.
          Length = 481

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +1

Query: 184 GTYCFREKKDRVYYISEKLLHLAQTVKPDNLVSAGTCFGKFTKTNKFRLH 333
           G    R++KD V+++++ L HLA     D++ +     GK      FR++
Sbjct: 270 GVIFIRKRKDGVFFLTQLLTHLATNETIDDVSAEKVSNGKVIVETNFRVY 319


>AL110490-11|CAB54452.1|  620|Caenorhabditis elegans Hypothetical
           protein Y48B6A.12 protein.
          Length = 620

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 229 SEKLLHLAQTVKPDNLVSAGTCFGKFTK 312
           ++ LL + +TVKP  L+ A T  G FT+
Sbjct: 400 TKNLLEVVKTVKPGALIGASTVAGAFTE 427


>AF100672-1|AAC68997.2|  334|Caenorhabditis elegans Hypothetical
           protein W05E7.2 protein.
          Length = 334

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = -1

Query: 215 LSFFSLKQYVPSGLSISNLTFTPMYLVSFSNNILVRSSDNTFIFNYFII 69
           L FFS   Y+P  +S+  L   P    S     +   +   FIF  F+I
Sbjct: 207 LIFFSALLYIPITISVRRLAHLPSVKQSSPQKYIFWQTITVFIFKSFLI 255


>AC024779-4|AAK68484.1|  439|Caenorhabditis elegans Hypothetical
           protein Y43B11AL.1 protein.
          Length = 439

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +1

Query: 187 TYCFREKKDRVYYISEKLLHLAQTVKPDNLVSAGTCFGKFTKTN 318
           T C   + ++++ +   +LH AQ +   +L+S    FG F K N
Sbjct: 194 TQCETVRIEQIFNLETVILHNAQWITLPDLLSLNCRFGSFRKFN 237


>AC024202-10|AAF36032.1|  327|Caenorhabditis elegans Hypothetical
           protein Y71H2B.3 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -3

Query: 486 YHHTLMFRCILCYPA*ATFDDVVPIQELLFRRRLHPH 376
           Y   L+F    CY      DD +P+ +++  R  HPH
Sbjct: 186 YITQLLFWSERCYEELQAIDDELPLLKMMAERASHPH 222


>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical
           protein F54D5.14 protein.
          Length = 1130

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/49 (24%), Positives = 29/49 (59%)
 Frame = +3

Query: 75  KIIEYESIIRRSYKNIIREANQIHWSKR*VTNRQT*WHILLQREERQSV 221
           K++E+E  IR   ++I ++ ++  + +R + N +    ILL+++  Q +
Sbjct: 339 KVLEFEEKIRECEQSIRKKTSEKKYMERTIVNAKNEVRILLEKQGNQDL 387


>Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
           protein F54D5.14 protein.
          Length = 1130

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/49 (24%), Positives = 29/49 (59%)
 Frame = +3

Query: 75  KIIEYESIIRRSYKNIIREANQIHWSKR*VTNRQT*WHILLQREERQSV 221
           K++E+E  IR   ++I ++ ++  + +R + N +    ILL+++  Q +
Sbjct: 339 KVLEFEEKIRECEQSIRKKTSEKKYMERTIVNAKNEVRILLEKQGNQDL 387


>Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical
           protein B0464.2 protein.
          Length = 1150

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 20/80 (25%), Positives = 31/80 (38%)
 Frame = +1

Query: 124 FEKLTKYIGVNVKLLIDRPDGTYCFREKKDRVYYISEKLLHLAQTVKPDNLVSAGTCFGK 303
           F  + K    NV  LI +    +  ++ K  +YY  + +     T+  D  V  G CF K
Sbjct: 166 FNYVVKTNPKNVLPLIGKAVIAFNKKDYKTAIYYFRKAIRQCRHTIA-DLRVGIGHCFAK 224

Query: 304 FTKTNKFRLHITALTYISPY 363
               +K +        I PY
Sbjct: 225 MGMMDKAKTAFERAMEIEPY 244


>U53336-1|AAA96174.1|  158|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 225 protein.
          Length = 158

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 18/63 (28%), Positives = 26/63 (41%)
 Frame = +3

Query: 363 CAVQSVGEAVCGTAVLVWAPHHQKWLRQDNREYTETSRCGGINDVRYPDWLWRSFKNDGR 542
           C  QS  E+ C      W  H +  +R   +   E S   G+N++RY       FK    
Sbjct: 23  CREQSTKESFCNAH---WVSHVKVKVRVGKQGLPEGSERKGLNNLRYTVQHVEVFKKPSN 79

Query: 543 MST 551
           M+T
Sbjct: 80  MTT 82


>AF303253-1|AAG50211.1|  158|Caenorhabditis elegans tissue inhibitor
           of metalloproteinase2 protein.
          Length = 158

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 18/63 (28%), Positives = 26/63 (41%)
 Frame = +3

Query: 363 CAVQSVGEAVCGTAVLVWAPHHQKWLRQDNREYTETSRCGGINDVRYPDWLWRSFKNDGR 542
           C  QS  E+ C      W  H +  +R   +   E S   G+N++RY       FK    
Sbjct: 23  CREQSTKESFCNAH---WVSHVKVKVRVGKQGLPEGSERKGLNNLRYTVQHVEVFKKPSN 79

Query: 543 MST 551
           M+T
Sbjct: 80  MTT 82


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,809,280
Number of Sequences: 27780
Number of extensions: 323410
Number of successful extensions: 847
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)