Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24i13
         (468 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p...    29   2.2  
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AF003140-5|AAD47120.1|  814|Caenorhabditis elegans Hypothetical ...    27   8.9  
AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical ...    27   8.9  
AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical ...    27   8.9  
AC084158-33|AAK68575.1|   83|Caenorhabditis elegans Hypothetical...    27   8.9  

>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
           protein C28A5.6 protein.
          Length = 1061

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 19/66 (28%), Positives = 33/66 (50%)
 Frame = +3

Query: 12  GQVGEQRLSQEGWDLLTAARAPPKET*QLKSSCFANESTTGSESRPAEKIRRETQRADSW 191
           G+VGE++ S++  D++  + AP  E  + +     NE     E    EK+  E ++A + 
Sbjct: 164 GEVGEKKESEQPTDMVEPSSAPTTEETETE-----NEEEDDKEKTDKEKLDAEKEKALAE 218

Query: 192 VRLHGE 209
            RL  E
Sbjct: 219 KRLERE 224


>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
           protein C28A5.6 protein.
          Length = 1061

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 19/66 (28%), Positives = 33/66 (50%)
 Frame = +3

Query: 12  GQVGEQRLSQEGWDLLTAARAPPKET*QLKSSCFANESTTGSESRPAEKIRRETQRADSW 191
           G+VGE++ S++  D++  + AP  E  + +     NE     E    EK+  E ++A + 
Sbjct: 164 GEVGEKKESEQPTDMVEPSSAPTTEETETE-----NEEEDDKEKTDKEKLDAEKEKALAE 218

Query: 192 VRLHGE 209
            RL  E
Sbjct: 219 KRLERE 224


>AF003140-5|AAD47120.1|  814|Caenorhabditis elegans Hypothetical
           protein C44E4.1b protein.
          Length = 814

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +3

Query: 306 KPTYVTFA-KGLFVPKIIKISGV*KKNWIICHLIFILSCT 422
           KPT +T+A    +  K+IKI+G  +  W+  HL+  ++ T
Sbjct: 734 KPTLMTWAFVDAYFNKVIKITGEDRLEWLREHLVETINKT 773


>AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical
            protein C44E4.1a protein.
          Length = 2712

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +3

Query: 306  KPTYVTFA-KGLFVPKIIKISGV*KKNWIICHLIFILSCT 422
            KPT +T+A    +  K+IKI+G  +  W+  HL+  ++ T
Sbjct: 2632 KPTLMTWAFVDAYFNKVIKITGEDRLEWLREHLVETINKT 2671


>AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical
            protein C44E4.1c protein.
          Length = 2710

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +3

Query: 306  KPTYVTFA-KGLFVPKIIKISGV*KKNWIICHLIFILSCT 422
            KPT +T+A    +  K+IKI+G  +  W+  HL+  ++ T
Sbjct: 2630 KPTLMTWAFVDAYFNKVIKITGEDRLEWLREHLVETINKT 2669


>AC084158-33|AAK68575.1|   83|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.3 protein.
          Length = 83

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 114 ANESTTGSESRPAEKIRRETQRADSWVRLHGELFVEFDEYGYRH 245
           A +++TG E   AEK R+       W     + +++FD+Y Y H
Sbjct: 16  APKTSTGIEH--AEKARQVAGGKPDWSLYKCDEYLKFDKYSYAH 57


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,583,785
Number of Sequences: 27780
Number of extensions: 174907
Number of successful extensions: 501
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)