Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24i11
         (431 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY750848-1|AAU81930.1| 1032|Homo sapiens RTN3-A1 protein.              33   0.32 
AY427821-1|AAR02474.1| 1013|Homo sapiens reticulon 3-A protein.        33   0.32 
BC033896-1|AAH33896.1|  537|Homo sapiens adenylate kinase 5 prot...    29   9.0  
AY171600-1|AAO16520.2|  536|Homo sapiens adenylate kinase 6 prot...    29   9.0  

>AY750848-1|AAU81930.1| 1032|Homo sapiens RTN3-A1 protein.
          Length = 1032

 Score = 33.5 bits (73), Expect = 0.32
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -3

Query: 261 VLIKKGKLHSDTINLKRKRSRNNTLNNIKMKPLELAREIYSRNPTI 124
           +L K+GK H D +++K+      T NN+    + LA  ++   P+I
Sbjct: 113 ILAKEGKDHLDLLDMKKMEKPQGTSNNVSDSSVSLAAGVHCDRPSI 158


>AY427821-1|AAR02474.1| 1013|Homo sapiens reticulon 3-A protein.
          Length = 1013

 Score = 33.5 bits (73), Expect = 0.32
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -3

Query: 261 VLIKKGKLHSDTINLKRKRSRNNTLNNIKMKPLELAREIYSRNPTI 124
           +L K+GK H D +++K+      T NN+    + LA  ++   P+I
Sbjct: 94  ILAKEGKDHLDLLDMKKMEKPQGTSNNVSDSSVSLAAGVHCDRPSI 139


>BC033896-1|AAH33896.1|  537|Homo sapiens adenylate kinase 5
           protein.
          Length = 537

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = -3

Query: 207 RSRNNTLNNIKMKPLELAREIYSRNPTILQISKNTSTPFKDFRRLLEESGV-EMERPRSN 31
           +SR + L N+  +        Y R P I Q S  + T   +   L+EE  V +  RPR  
Sbjct: 48  QSRRSFLRNVMPENSNFPYRRYDRLPPIHQFSIESDTDLSETAELIEEYEVFDPTRPRPK 107

Query: 30  MI 25
           +I
Sbjct: 108 II 109


>AY171600-1|AAO16520.2|  536|Homo sapiens adenylate kinase 6
           protein.
          Length = 536

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = -3

Query: 207 RSRNNTLNNIKMKPLELAREIYSRNPTILQISKNTSTPFKDFRRLLEESGV-EMERPRSN 31
           +SR + L N+  +        Y R P I Q S  + T   +   L+EE  V +  RPR  
Sbjct: 48  QSRRSFLRNVMPENSNFPYRRYDRLPPIHQFSIESDTDLSETAELIEEYEVFDPTRPRPK 107

Query: 30  MI 25
           +I
Sbjct: 108 II 109


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,432,374
Number of Sequences: 237096
Number of extensions: 831693
Number of successful extensions: 1930
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1930
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)