Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24h19
(125 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0929 - 28898627-28898728,28898826-28898906,28899419-288995... 29 0.53
12_01_0576 + 4705912-4706220,4706319-4706393,4707398-4707477,470... 28 0.92
10_08_0424 - 17803984-17805270 28 0.92
02_05_0617 + 30383334-30383579,30383592-30383681,30383772-303839... 28 0.92
01_01_0680 + 5217633-5219072 28 1.2
01_07_0292 + 42560302-42560668,42560818-42560910,42563746-425639... 27 2.1
09_06_0118 - 20964931-20966349 27 2.8
06_03_0705 - 23707987-23708295,23708532-23708573,23709772-237099... 27 2.8
05_05_0227 - 23449579-23450459,23450574-23450691 27 2.8
03_06_0651 + 35297560-35297895,35298881-35298991,35299670-352997... 27 2.8
01_05_0792 - 25275013-25275551,25275715-25275907 27 2.8
08_02_0381 - 16518670-16518726,16518841-16518941,16519030-165192... 26 3.7
04_04_0728 - 27608011-27608136,27608345-27608401,27608598-276086... 26 3.7
07_03_1535 + 27531468-27531892,27531988-27532407,27533183-275333... 26 4.9
01_05_0490 + 22672241-22674679 26 4.9
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626... 25 6.5
10_01_0131 - 1541964-1542161,1542235-1542390,1543046-1543923,154... 25 6.5
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 25 6.5
07_01_0516 - 3850252-3852870 25 6.5
04_03_0621 - 18102243-18104249 25 6.5
03_06_0110 - 31727376-31727381,31727554-31727664,31728071-317281... 25 6.5
01_01_1127 + 8930593-8932681,8932812-8933401 25 6.5
01_01_0482 + 3535083-3535194,3535301-3535467 25 6.5
04_01_0022 + 324422-324445,324870-325265,325366-325546,325781-32... 25 8.6
03_05_0001 - 19386264-19386284,19386446-19386517,19386614-193873... 25 8.6
02_02_0632 - 12413660-12413677,12413839-12413870,12414377-124144... 25 8.6
>03_05_0929 -
28898627-28898728,28898826-28898906,28899419-28899523,
28899598-28899670,28900235-28900287,28900987-28901307
Length = 244
Score = 29.1 bits (62), Expect = 0.53
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 120 PPPPD-ARLHRRMTFVRSRAKPPPQRHTATTR 28
PPPP ARLH+R++ R + PP A R
Sbjct: 4 PPPPSLARLHQRLSLSLLRGRSPPAAADAFLR 35
>12_01_0576 +
4705912-4706220,4706319-4706393,4707398-4707477,
4707578-4707712,4708131-4708195,4708292-4708419,
4709108-4709364,4709457-4709982
Length = 524
Score = 28.3 bits (60), Expect = 0.92
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -3
Query: 120 PPPPDARLHRRMTFVRSRAKPPPQRHTATTRCSTRRG 10
PPPP AR + R+ S A+ P H T S G
Sbjct: 33 PPPPRARRYNRLAASASAAREMPWPHVLTVAGSDSGG 69
>10_08_0424 - 17803984-17805270
Length = 428
Score = 28.3 bits (60), Expect = 0.92
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -3
Query: 117 PPPDARLHRRMTFVRSRAKPPPQRHTATTRCSTR 16
P P A L RR + + PPP T TT STR
Sbjct: 13 PLPAAHLLRRFSALPDVDHPPPPASTPTTPASTR 46
>02_05_0617 +
30383334-30383579,30383592-30383681,30383772-30383901,
30384578-30384591
Length = 159
Score = 28.3 bits (60), Expect = 0.92
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 120 PPPPDARLHRRMTFVRSRAKPPPQRHT 40
PPPP R HRR+ A+ PP R +
Sbjct: 53 PPPPPRRSHRRLIAPAVPAEFPPSRRS 79
>01_01_0680 + 5217633-5219072
Length = 479
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 117 PPPDARLHRRMTFVRSRAKPPPQRHTATTR 28
PPP A L R T + A P P+R +A++R
Sbjct: 17 PPPTALLLPRTTTTTAGAAPAPRRSSASSR 46
>01_07_0292 +
42560302-42560668,42560818-42560910,42563746-42563969,
42564047-42564147,42564229-42564441,42564843-42565002
Length = 385
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Frame = -3
Query: 120 PPPPDARLHRRMTFVRSR-----AKPPPQRHTATTRC 25
PPPP R +R ++ V R A PP R +TRC
Sbjct: 34 PPPPSPRRYRSISDVMRRSLPVDAAPPVARAYESTRC 70
>09_06_0118 - 20964931-20966349
Length = 472
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -3
Query: 120 PPPPDARLHRRMTFVRSRAKPPPQRHTATTRCSTRR 13
P P +H + R PP+R + T+R S+R+
Sbjct: 231 PAPSQLTVHHLLHLQYQRMVMPPERRSTTSRLSSRQ 266
>06_03_0705 -
23707987-23708295,23708532-23708573,23709772-23709957,
23710112-23710222,23710337-23710408,23710499-23710747,
23711052-23711135,23711271-23711456,23711540-23711764
Length = 487
Score = 26.6 bits (56), Expect = 2.8
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 120 PPPPDARLHRRMTFVRSRAKPPPQRHTAT 34
PPPP L + V SR +PP + ++
Sbjct: 300 PPPPKVELKKLYVQVHSRGRPPTPKFNSS 328
>05_05_0227 - 23449579-23450459,23450574-23450691
Length = 332
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 108 DARLHRRMTFVRSRAKPPPQRHTATTRCSTRRGD 7
D+RL RR+ RA PP + + S+ RGD
Sbjct: 200 DSRLFRRLESQLERALPPQDTASTSASSSSCRGD 233
>03_06_0651 +
35297560-35297895,35298881-35298991,35299670-35299744,
35300165-35300225,35300406-35300479,35300564-35300668,
35301099-35301206,35301604-35301707,35302005-35302223,
35302505-35302646,35302694-35302825,35302962-35303066
Length = 523
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 2 RLSPRRVEQRVVAVCR*GGGFA 67
R++PRRV R VA GGGFA
Sbjct: 36 RVAPRRVVLRPVAALGGGGGFA 57
>01_05_0792 - 25275013-25275551,25275715-25275907
Length = 243
Score = 26.6 bits (56), Expect = 2.8
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 15 DESSSVLSQCVAEAEVLLVSAQTSSSYEVARLGGG 119
DE + + VA AEV V+AQT + EVA + GG
Sbjct: 26 DEVKLSVEEAVAPAEV--VAAQTEEANEVAVVSGG 58
>08_02_0381 -
16518670-16518726,16518841-16518941,16519030-16519200,
16519498-16519672,16519787-16519887,16520247-16520358,
16520522-16521055,16521966-16522056,16523403-16523590,
16523676-16523960
Length = 604
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = -3
Query: 117 PPPDARLHRR-MTFVRSRAKPP 55
PPP ARL RR + +R+ A PP
Sbjct: 30 PPPTARLRRRVLCAIRADAPPP 51
>04_04_0728 -
27608011-27608136,27608345-27608401,27608598-27608665,
27608697-27608793,27610467-27610532,27610788-27611174
Length = 266
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 123 APPPPDARLHRRMTFVRSRAKPPPQR 46
AP PP A R F R++PPP++
Sbjct: 22 APAPPAAGGFLRALFPSRRSRPPPEK 47
>07_03_1535 +
27531468-27531892,27531988-27532407,27533183-27533341,
27533461-27533782
Length = 441
Score = 25.8 bits (54), Expect = 4.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 96 HRRMTFVRSRAKPPPQRHTATTRCSTRRGD 7
H R ++ R +PPP+R CST + D
Sbjct: 222 HYRSPYLVRRGRPPPRRAHRGAACSTLQLD 251
>01_05_0490 + 22672241-22674679
Length = 812
Score = 25.8 bits (54), Expect = 4.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 120 PPPPDARLHRRMTFVRSRAKPPP 52
PPPP R R+ SR PPP
Sbjct: 644 PPPPTTRRSRKPPQPPSRPAPPP 666
>10_08_0683 -
19860777-19861070,19861677-19861874,19862498-19862659,
19862763-19862911,19863089-19863236,19863317-19863385,
19863471-19863719,19863937-19864131,19864444-19864560,
19864978-19866537
Length = 1046
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3
Query: 120 PPPPDARLHRRMTFVRSRAKPPPQ 49
PPPP A L +F + PPPQ
Sbjct: 37 PPPPSAYLSPSRSFHGYPSAPPPQ 60
>10_01_0131 -
1541964-1542161,1542235-1542390,1543046-1543923,
1544060-1544135,1544162-1544191
Length = 445
Score = 25.4 bits (53), Expect = 6.5
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 120 PPPPDARLHRRMTFVRSRAKPPPQRHTATTRCSTRR 13
P P R + +T +RA PP R + T CST R
Sbjct: 12 PRAPPVRRNAPVTPAATRA-PPATRASTRTTCSTER 46
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 120 PPPPDARLHRRMTFVRSRAKPPP 52
PPPPD R V +R PPP
Sbjct: 386 PPPPDTRPPFMAPGVNARPLPPP 408
>07_01_0516 - 3850252-3852870
Length = 872
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 123 APPPPDARLHRRMTFVRSRAKP 58
+PPPP RLH R + A P
Sbjct: 40 SPPPPRTRLHTRALAAAASADP 61
>04_03_0621 - 18102243-18104249
Length = 668
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 78 VRSRAKPPPQRHTATTRCSTRRGDKR 1
+ SR+ P H+A R +RRG +R
Sbjct: 513 IESRSASPTNHHSAPIRVPSRRGGQR 538
>03_06_0110 -
31727376-31727381,31727554-31727664,31728071-31728133,
31729202-31729331,31729532-31729701,31729800-31729859,
31729941-31730018,31730108-31730197,31730275-31731118,
31731220-31731281,31731362-31731423,31731511-31731700
Length = 621
Score = 25.4 bits (53), Expect = 6.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -3
Query: 123 APP-PPDARLHRRMTFVRSRAKPPPQRH-TATTRCSTRR 13
APP PP +R+ R T + AKP + H T R S R
Sbjct: 114 APPKPPRSRIARLSTATEAAAKPRLKTHRICTLRASPTR 152
>01_01_1127 + 8930593-8932681,8932812-8933401
Length = 892
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 120 PPPPDARLHRRMTFVRSRAKPPP 52
PPPP A R F+ S KPPP
Sbjct: 15 PPPPPAACAARYDFLNS--KPPP 35
>01_01_0482 + 3535083-3535194,3535301-3535467
Length = 92
Score = 25.4 bits (53), Expect = 6.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 120 PPPPDARLHRRMTFVRSRAKPPP 52
PPPP RR+ +++ PPP
Sbjct: 47 PPPPQHGAGRRLLSTQNQVTPPP 69
>04_01_0022 +
324422-324445,324870-325265,325366-325546,325781-326072,
326389-326461,326610-326700,326815-326894,326992-327234
Length = 459
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 123 APPPPDARLHRRMTFVRSRAKPPPQRHTATT 31
A PP R HRR R + +PPP + A++
Sbjct: 419 AAPPAQTR-HRRRRHGRRQQQPPPAQPAASS 448
>03_05_0001 - 19386264-19386284,19386446-19386517,19386614-19387357,
19387454-19388884,19388953-19389118,19392035-19392114,
19392393-19392462,19392550-19392761,19392837-19392890,
19393471-19393623,19393715-19393930,19394029-19394248,
19394332-19394399,19394510-19394643,19394755-19394854,
19394943-19395421,19395506-19395699,19396270-19396355,
19396364-19396444,19396842-19397023,19397305-19397346,
19398247-19398558,19399374-19399434,19399435-19399617,
19399744-19399863,19400380-19401051,19402597-19402668,
19402742-19402865,19403563-19403651,19405023-19405097
Length = 2170
Score = 25.0 bits (52), Expect = 8.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -3
Query: 123 APPPPDARLHRRMTFVRSRAKPPPQ 49
APPPP + H TF S +P Q
Sbjct: 2051 APPPPPPQPHPSQTFQGSLQQPQEQ 2075
>02_02_0632 -
12413660-12413677,12413839-12413870,12414377-12414494,
12414794-12414860,12416098-12416237,12416378-12416470,
12416581-12416643,12418070-12418120,12419508-12419606,
12419876-12420012,12420121-12420219,12420346-12420523
Length = 364
Score = 25.0 bits (52), Expect = 8.6
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -3
Query: 60 PPPQRHTATTRCSTR 16
PPP H T CSTR
Sbjct: 4 PPPPPHRGATSCSTR 18
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,062,484
Number of Sequences: 37544
Number of extensions: 86045
Number of successful extensions: 468
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 14,793,348
effective HSP length: 22
effective length of database: 13,967,380
effective search space used: 265380220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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