Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24h19
(125 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061005-1|AAL28553.1| 527|Drosophila melanogaster HL02088p pro... 27 3.6
AF536543-1|AAN77184.1| 960|Drosophila melanogaster SR-related C... 27 3.6
AE014296-2867|AAX52741.1| 960|Drosophila melanogaster CG33522-P... 27 3.6
AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-P... 27 4.8
BT001526-1|AAN71281.1| 720|Drosophila melanogaster RE04406p pro... 26 6.3
AY069736-1|AAL39881.1| 831|Drosophila melanogaster LP05464p pro... 26 6.3
AY069614-1|AAL39759.1| 271|Drosophila melanogaster LD37855p pro... 26 6.3
AL035311-2|CAA22949.1| 1854|Drosophila melanogaster EG:52C10.5 p... 26 6.3
AF124743-1|AAD32857.1| 720|Drosophila melanogaster DNA replicat... 26 6.3
AE014296-1533|AAF50357.1| 720|Drosophila melanogaster CG4978-PA... 26 6.3
AE013599-2562|AAS64818.1| 1809|Drosophila melanogaster CG6355-PB... 26 6.3
AE013599-2561|AAF57789.1| 1809|Drosophila melanogaster CG6355-PA... 26 6.3
AB010109-1|BAA34733.1| 717|Drosophila melanogaster MCM7 protein. 26 6.3
BT029102-1|ABJ17035.1| 1131|Drosophila melanogaster IP14231p pro... 26 8.4
AY102692-1|AAM27521.1| 395|Drosophila melanogaster LD38710p pro... 26 8.4
AE014134-1711|AAF52820.1| 613|Drosophila melanogaster CG5924-PA... 26 8.4
AE014134-1354|AAF52569.2| 1131|Drosophila melanogaster CG14535-P... 26 8.4
>AY061005-1|AAL28553.1| 527|Drosophila melanogaster HL02088p
protein.
Length = 527
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 120 PPPPDARLHRRMTFVRSRAKPPPQRHTATTRCSTR 16
P + R++R + RSR+K PP R + +R +R
Sbjct: 324 PKKSNKRVYRSKSRSRSRSKTPPHRDRSLSRSRSR 358
>AF536543-1|AAN77184.1| 960|Drosophila melanogaster SR-related CTD
associated factor 6 protein.
Length = 960
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 120 PPPPDARLHRRMTFVRSRAKPPPQRHTATTRCSTR 16
P + R++R + RSR+K PP R + +R +R
Sbjct: 757 PKKSNKRVYRSKSRSRSRSKTPPHRDRSLSRSRSR 791
>AE014296-2867|AAX52741.1| 960|Drosophila melanogaster CG33522-PA,
isoform A protein.
Length = 960
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 120 PPPPDARLHRRMTFVRSRAKPPPQRHTATTRCSTR 16
P + R++R + RSR+K PP R + +R +R
Sbjct: 757 PKKSNKRVYRSKSRSRSRSKTPPHRDRSLSRSRSR 791
>AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-PB
protein.
Length = 4129
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 120 PPPPDARLHRRMTFVRSRAKPPPQRHTATTRCST 19
PPPP A++ + +T V+ + PPP + + +T
Sbjct: 411 PPPPQAQV-KEVTPVKVVSSPPPPKEITPAKVAT 443
>BT001526-1|AAN71281.1| 720|Drosophila melanogaster RE04406p
protein.
Length = 720
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 108 DARLHRRMTFVRSRAKPPPQRHTATTRCSTRR 13
D RL + +T+V S +K PP R A RR
Sbjct: 530 DLRLAKHITYVHSHSKQPPTRVKALDMNLMRR 561
>AY069736-1|AAL39881.1| 831|Drosophila melanogaster LP05464p
protein.
Length = 831
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 13 PTSRAACCRSVS--LRRRFCS*AHKRHPPMKSRVWGG 117
P S AA C S++ L RF A+KR PP GG
Sbjct: 84 PLSDAAKCLSLAKYLEMRFHGHAYKRRPPSTDAEQGG 120
>AY069614-1|AAL39759.1| 271|Drosophila melanogaster LD37855p
protein.
Length = 271
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 108 DARLHRRMTFVRSRAKPPPQRHTATTRCSTRR 13
D RL + +T+V S +K PP R A RR
Sbjct: 81 DLRLAKHITYVHSHSKQPPTRVKALDMNLMRR 112
>AL035311-2|CAA22949.1| 1854|Drosophila melanogaster EG:52C10.5
protein.
Length = 1854
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 13 PTSRAACCRSVS--LRRRFCS*AHKRHPPMKSRVWGG 117
P S AA C S++ L RF A+KR PP GG
Sbjct: 1102 PLSDAAKCLSLAKYLEMRFHGHAYKRRPPSTDAEQGG 1138
>AF124743-1|AAD32857.1| 720|Drosophila melanogaster DNA replication
factor MCM7 protein.
Length = 720
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 108 DARLHRRMTFVRSRAKPPPQRHTATTRCSTRR 13
D RL + +T+V S +K PP R A RR
Sbjct: 530 DLRLAKHITYVHSHSKQPPTRVKALDMNLMRR 561
>AE014296-1533|AAF50357.1| 720|Drosophila melanogaster CG4978-PA
protein.
Length = 720
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 108 DARLHRRMTFVRSRAKPPPQRHTATTRCSTRR 13
D RL + +T+V S +K PP R A RR
Sbjct: 530 DLRLAKHITYVHSHSKQPPTRVKALDMNLMRR 561
>AE013599-2562|AAS64818.1| 1809|Drosophila melanogaster CG6355-PB,
isoform B protein.
Length = 1809
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 13 PTSRAACCRSVS--LRRRFCS*AHKRHPPMKSRVWGG 117
P S AA C S++ L RF A+KR PP GG
Sbjct: 1062 PLSDAAKCLSLAKYLEMRFHGHAYKRRPPSTDAEQGG 1098
>AE013599-2561|AAF57789.1| 1809|Drosophila melanogaster CG6355-PA,
isoform A protein.
Length = 1809
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 13 PTSRAACCRSVS--LRRRFCS*AHKRHPPMKSRVWGG 117
P S AA C S++ L RF A+KR PP GG
Sbjct: 1062 PLSDAAKCLSLAKYLEMRFHGHAYKRRPPSTDAEQGG 1098
>AB010109-1|BAA34733.1| 717|Drosophila melanogaster MCM7 protein.
Length = 717
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 108 DARLHRRMTFVRSRAKPPPQRHTATTRCSTRR 13
D RL + +T+V S +K PP R A RR
Sbjct: 528 DLRLAKHITYVHSHSKQPPTRVKALDMNLMRR 559
>BT029102-1|ABJ17035.1| 1131|Drosophila melanogaster IP14231p protein.
Length = 1131
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 109 RRATS*EDDVCALTSKTSASATHCDNTLLDS 17
+R T DD+C L K+ A+A N+L D+
Sbjct: 960 KRFTPQHDDICELDEKSMAAAVGKGNSLEDA 990
>AY102692-1|AAM27521.1| 395|Drosophila melanogaster LD38710p
protein.
Length = 395
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = -3
Query: 117 PPPDARLHRRMTFVRSRAKPPPQRHTATTRCSTRRGD 7
P P L RR+ AK P +H A T R D
Sbjct: 89 PAPHLALRRRLNLRHILAKATPVQHKAITTFGAMRND 125
>AE014134-1711|AAF52820.1| 613|Drosophila melanogaster CG5924-PA
protein.
Length = 613
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = -3
Query: 117 PPPDARLHRRMTFVRSRAKPPPQRHTATTRCSTRRGD 7
P P L RR+ AK P +H A T R D
Sbjct: 307 PAPHLALRRRLNLRHILAKATPVQHKAITTFGAMRND 343
>AE014134-1354|AAF52569.2| 1131|Drosophila melanogaster CG14535-PA
protein.
Length = 1131
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 109 RRATS*EDDVCALTSKTSASATHCDNTLLDS 17
+R T DD+C L K+ A+A N+L D+
Sbjct: 960 KRFTPQHDDICELDEKSMAAAVGKGNSLEDA 990
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,942,995
Number of Sequences: 53049
Number of extensions: 122598
Number of successful extensions: 481
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 479
length of database: 24,988,368
effective HSP length: 22
effective length of database: 23,821,290
effective search space used: 452604510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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