Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24h19
         (125 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54237-7|CAB54312.2|  645|Caenorhabditis elegans Hypothetical pr...    27   1.4  
Z54235-9|CAB54190.2|  645|Caenorhabditis elegans Hypothetical pr...    27   1.4  
AL132876-21|CAD21671.1|  418|Caenorhabditis elegans Hypothetical...    27   1.8  
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.      27   2.4  
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o...    27   2.4  
U97549-4|AAO91736.1|  460|Caenorhabditis elegans Dopamine recept...    26   3.2  
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr...    25   7.4  
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical...    25   7.4  
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical...    25   7.4  
AC025722-2|AAK68508.1|  605|Caenorhabditis elegans Hypothetical ...    25   9.8  

>Z54237-7|CAB54312.2|  645|Caenorhabditis elegans Hypothetical
           protein T11B7.4b protein.
          Length = 645

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -3

Query: 120 PPPPDARLHRRMTFVRSRAKPPPQRHTATTRCSTRRG 10
           PPP +   + + +F R+  +  PQ++T   R    RG
Sbjct: 416 PPPSNGSSYTKTSFERTTTETRPQQNTGAPRAGDFRG 452


>Z54235-9|CAB54190.2|  645|Caenorhabditis elegans Hypothetical
           protein T11B7.4b protein.
          Length = 645

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -3

Query: 120 PPPPDARLHRRMTFVRSRAKPPPQRHTATTRCSTRRG 10
           PPP +   + + +F R+  +  PQ++T   R    RG
Sbjct: 416 PPPSNGSSYTKTSFERTTTETRPQQNTGAPRAGDFRG 452


>AL132876-21|CAD21671.1|  418|Caenorhabditis elegans Hypothetical
           protein Y105E8A.25 protein.
          Length = 418

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 114 PPDARLHRRMTFVRSRAKPPPQRHT 40
           PP  RL RR++ V S ++  PQR T
Sbjct: 369 PPPVRLPRRVSAVSSTSRSSPQRAT 393


>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
          Length = 1475

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -3

Query: 120 PPPPDARLHRRMTFVRSRAKPPPQR 46
           PP P      RM+ V S   PPPQ+
Sbjct: 823 PPKPQVSTSSRMSSVPSHPPPPPQQ 847


>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
           pal-1 protein 3,isoform a protein.
          Length = 1475

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -3

Query: 120 PPPPDARLHRRMTFVRSRAKPPPQR 46
           PP P      RM+ V S   PPPQ+
Sbjct: 823 PPKPQVSTSSRMSSVPSHPPPPPQQ 847


>U97549-4|AAO91736.1|  460|Caenorhabditis elegans Dopamine receptor
           protein 1, isoforma protein.
          Length = 460

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -3

Query: 114 PPDARLHRRMTFVRSRAKPPPQRHTATTRCST-RRGDKR 1
           PPD+    R T   SR     +R T TT  +T RRGDK+
Sbjct: 238 PPDSPATERTTMTVSRHYS--RRSTTTTTTATPRRGDKK 274


>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical protein
            H05G16.1 protein.
          Length = 1111

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 120  PPPPDARLHRRMTFVRSRAKPPP 52
            PPPP+  L++ M      A PPP
Sbjct: 1023 PPPPEEILNKAMISSSRPAPPPP 1045


>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
           protein Y51H4A.12 protein.
          Length = 1677

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 13/40 (32%), Positives = 15/40 (37%)
 Frame = -3

Query: 120 PPPPDARLHRRMTFVRSRAKPPPQRHTATTRCSTRRGDKR 1
           PPPP    H      R R +P   RH +      R G  R
Sbjct: 749 PPPPSQFQHTDSIAHRPRGRPKGTRHPSVAVQPQRSGGAR 788


>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
           protein F15E6.1 protein.
          Length = 1655

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 13/40 (32%), Positives = 15/40 (37%)
 Frame = -3

Query: 120 PPPPDARLHRRMTFVRSRAKPPPQRHTATTRCSTRRGDKR 1
           PPPP    H      R R +P   RH +      R G  R
Sbjct: 741 PPPPSQFQHTDSIAHRPRGRPKGTRHPSVAVQPQRSGGAR 780


>AC025722-2|AAK68508.1|  605|Caenorhabditis elegans Hypothetical
           protein Y50D4C.3 protein.
          Length = 605

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 120 PPPPDARLHRRMTFVRSRAKPPPQ 49
           PPPP ++ H R    +++  PPP+
Sbjct: 493 PPPPPSQHHPRGFQQQAQQNPPPR 516


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,561,573
Number of Sequences: 27780
Number of extensions: 48691
Number of successful extensions: 158
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 12,740,198
effective HSP length: 22
effective length of database: 12,129,038
effective search space used: 230451722
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)