Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24h07
         (473 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    26   0.18 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    26   0.18 
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   3.8  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   3.8  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   6.7  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   8.9  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 26.2 bits (55), Expect = 0.18
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 7/38 (18%)
 Frame = +1

Query: 316 KCWRLPQPCCSPEPS------*LVPV-ENSQQSASATR 408
           +CWRL + C S EPS       +VPV E+ QQ A  ++
Sbjct: 830 ECWRLMEQCWSGEPSKRPLLGAIVPVLESIQQKAKRSK 867


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 26.2 bits (55), Expect = 0.18
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 7/38 (18%)
 Frame = +1

Query: 316 KCWRLPQPCCSPEPS------*LVPV-ENSQQSASATR 408
           +CWRL + C S EPS       +VPV E+ QQ A  ++
Sbjct: 868 ECWRLMEQCWSGEPSKRPLLGAIVPVLESIQQKAKRSK 905


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 436 LHMSKVFHNLWWQRHFVENFQL 371
           +H  KV  ++WW    +  F+L
Sbjct: 61  IHRKKVLLSVWWDYKGIVYFEL 82


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 436 LHMSKVFHNLWWQRHFVENFQL 371
           +H  KV  ++WW    +  F+L
Sbjct: 183 IHRKKVLLSVWWDYKGIVYFEL 204


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -2

Query: 436 LHMSKVFHNLWWQRHFVENFQL 371
           +H  KV   +WW    +  F+L
Sbjct: 62  IHRKKVLLLVWWDHKGIVYFEL 83


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 155 HISVCSQTMNDFFSKNLTN 99
           ++ +  Q + D  S+NLTN
Sbjct: 9   YLGITCQGVTDIHSRNLTN 27


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,935
Number of Sequences: 438
Number of extensions: 2551
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)