Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24g01
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95559-3|CAB08998.1| 786|Caenorhabditis elegans Hypothetical pr... 137 7e-33
Z93378-1|CAB07582.1| 303|Caenorhabditis elegans Hypothetical pr... 29 2.2
U58751-8|AAB00659.2| 635|Caenorhabditis elegans Hypothetical pr... 29 2.2
U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81077-3|CAB03067.1| 527|Caenorhabditis elegans Hypothetical pr... 28 6.7
U40941-9|AAX55692.1| 294|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81477-8|CAC70076.1| 739|Caenorhabditis elegans Hypothetical pr... 27 8.8
AL117201-6|CAB55065.2| 739|Caenorhabditis elegans Hypothetical ... 27 8.8
>Z95559-3|CAB08998.1| 786|Caenorhabditis elegans Hypothetical
protein Y41E3.4 protein.
Length = 786
Score = 137 bits (331), Expect = 7e-33
Identities = 70/187 (37%), Positives = 118/187 (63%), Gaps = 2/187 (1%)
Frame = +1
Query: 97 ERFKLLGLNEQKAKETLKNANVTKVLLAALDEVQLQSLPLGA--GILIYHLATKIKPQTM 270
E LGL++ K ETLKN +T+ + ++ ++ +S + G L+Y LATK+KPQ
Sbjct: 5 EELLSLGLSDSKVAETLKNVKLTETI-GSIVKLASESGEISKQKGTLLYQLATKLKPQVA 63
Query: 271 SKLNFICQYIASGKLDSTLRVDAALDYLLGNINEANVNIEEFEKACGVGVIVTPEQVEQA 450
+ + +YI + + + ++ AA++YLL + + + + +FEK+CGVGV+VT + +E A
Sbjct: 64 AHTPLVVKYIMNDGIKTEPQLSAAIEYLLSHTVKG-IQVPDFEKSCGVGVVVTIDDIEAA 122
Query: 451 VEKHMVKYKQELLEKRYRFNSGIIMQAVRADLTWADGKAIKSEVDVQIFDLLGPKTEADL 630
V K + +++++++ +RY F +G ++ +RA L WADG K EVD++ +LLGPKT DL
Sbjct: 123 VTKVIGQHREKIVAERYSFPAGKLLGELRALLPWADGAITKKEVDLRFLELLGPKTAEDL 182
Query: 631 APVPKAK 651
AP K K
Sbjct: 183 APKKKEK 189
>Z93378-1|CAB07582.1| 303|Caenorhabditis elegans Hypothetical
protein F19H8.2 protein.
Length = 303
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 575 LFIALPSAQVRSALTACMIIPELNLYLFSNSSCLYFTICFSTACS 441
LFI+L V C I+ + FS+S+C Y +C ACS
Sbjct: 8 LFISLTFVGVLETADICDILDANYCFYFSDSAC-YINLCQCEACS 51
>U58751-8|AAB00659.2| 635|Caenorhabditis elegans Hypothetical
protein C07G1.2 protein.
Length = 635
Score = 29.5 bits (63), Expect = 2.2
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = -1
Query: 629 RSASVLGPNKSKICTSTSLFIALPSA--QVRSALTACMIIPELNLYLFSNSSCLYFTICF 456
+S S LGP + T+ PS+ Q+R + + P L + N SCL C
Sbjct: 483 QSESSLGPLQPTTLHPTNPSFDSPSSVSQMRRTSPSATLAPRLPAW---NLSCLREPNCT 539
Query: 455 STACSTCSGVTITPTPQA 402
ST STC + + QA
Sbjct: 540 STVISTCEPIRCSHCQQA 557
>U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical
protein C56E6.5 protein.
Length = 595
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = -1
Query: 590 CTSTSLFIALPSAQVRSALTACMIIPELNLYLFSNSSCLYFTICFSTACSTCSGVTITPT 411
C +SLF+ + +S M LNL+L S S FTIC + CS + I T
Sbjct: 424 CIQSSLFVGIVLWSFKSE---AMFQISLNLFLLSIFSFSIFTIC-ARYLKNCSNIVILQT 479
>Z81077-3|CAB03067.1| 527|Caenorhabditis elegans Hypothetical
protein F36A2.2 protein.
Length = 527
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 82 PEEMVERFKLLGLNEQKAKETLKNANVTKVLLAALDEVQL 201
PE+ + + N + KETL+N +TKVL +D+ +L
Sbjct: 47 PEKQKNSDETIEKNLRFWKETLENQRITKVLAPMVDQSEL 86
>U40941-9|AAX55692.1| 294|Caenorhabditis elegans Hypothetical
protein F35C8.1 protein.
Length = 294
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 177 CGVR*GAIAVASTWCRHFDLPSSYQNQTSNYEQVKLYLPIYCIRKTGFNVASRR 338
CG+ +IAV+ T C+ + P SN + I+ + T F +A+ R
Sbjct: 208 CGILENSIAVSDTGCQQYTAPEILVKGVSNSPGYSIKSDIWSLGITIFELATLR 261
>Z81477-8|CAC70076.1| 739|Caenorhabditis elegans Hypothetical
protein Y53H1C.3 protein.
Length = 739
Score = 27.5 bits (58), Expect = 8.8
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Frame = +1
Query: 253 IKPQTMSKLNFICQYIASGKLDSTLRVD---AALDYL--LGNINEANVNIEEFEKACGVG 417
+KP+ + L ICQ + S +TL D AL+ L L A +I F +
Sbjct: 112 VKPKVLENLEKICQNLTSILNSATLEADQLSTALEALTSLSTSFNATSDIWMFHEYTSTI 171
Query: 418 VIVTP-EQVEQAVEKHMVKYKQEL 486
V P + + VE+H+ KYK L
Sbjct: 172 QAVAPFLKTARGVEEHL-KYKDNL 194
>AL117201-6|CAB55065.2| 739|Caenorhabditis elegans Hypothetical
protein Y53H1C.3 protein.
Length = 739
Score = 27.5 bits (58), Expect = 8.8
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Frame = +1
Query: 253 IKPQTMSKLNFICQYIASGKLDSTLRVD---AALDYL--LGNINEANVNIEEFEKACGVG 417
+KP+ + L ICQ + S +TL D AL+ L L A +I F +
Sbjct: 112 VKPKVLENLEKICQNLTSILNSATLEADQLSTALEALTSLSTSFNATSDIWMFHEYTSTI 171
Query: 418 VIVTP-EQVEQAVEKHMVKYKQEL 486
V P + + VE+H+ KYK L
Sbjct: 172 QAVAPFLKTARGVEEHL-KYKDNL 194
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,842,749
Number of Sequences: 27780
Number of extensions: 275053
Number of successful extensions: 909
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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