Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24g01
(653 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 27 0.21
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 25 0.48
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 25 0.48
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 23 2.6
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 23 2.6
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 2.6
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 23 3.4
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 23 3.4
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 22 4.5
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 4.5
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 6.0
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 6.0
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 6.0
EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate isome... 21 7.9
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 7.9
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 7.9
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 7.9
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 7.9
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 7.9
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 7.9
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 7.9
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 7.9
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 7.9
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 7.9
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 7.9
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 7.9
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 7.9
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 26.6 bits (56), Expect = 0.21
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 442 EQAVEKHMVKYKQELLEKRYRFNSGIIMQAVR 537
+Q +EKH+++YK+ L KR IM VR
Sbjct: 429 DQKLEKHLIEYKKMLKIKRLFGKDRKIMDMVR 460
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 25.4 bits (53), Expect = 0.48
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 246 YQNQTSNYEQVKLYLPIYC 302
Y+N N EQ+ + +PIYC
Sbjct: 106 YKNYIINIEQIPVPVPIYC 124
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 25.4 bits (53), Expect = 0.48
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 246 YQNQTSNYEQVKLYLPIYC 302
Y+N N EQ+ + +PIYC
Sbjct: 347 YKNYIINIEQIPVPVPIYC 365
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 23.0 bits (47), Expect = 2.6
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = +3
Query: 420 YCNTRTSRASSR---KTYGKIQAGTIRKEIQVQLWYNHAG 530
Y N + R+ SR +AG RK++ + +W++H G
Sbjct: 38 YNNIKRKRSWSRPRESAQTTSKAGIHRKKVLLLVWWDHKG 77
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 515 PELNLYLFSNSSCLYF 468
P+LN +L+ S CLY+
Sbjct: 303 PDLNEWLYILSGCLYY 318
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 426 YNNTNTTGFFKFLNIYISFINI 361
YNN N + + +Y + INI
Sbjct: 338 YNNYNNNNYNNYKKLYYNIINI 359
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.6 bits (46), Expect = 3.4
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 406 CGVGVIVTPEQVEQAVEKHMVKYKQELLEKRYRFNSGII-MQAVRADLTWADG 561
CG I +P + ++V+KH + + L + G I +++ TW DG
Sbjct: 372 CGDARIFSPHEENESVDKHPNRRARGQLRTKIESGEGTIPVKSSEGIQTW-DG 423
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 262 QTMSKLNFICQYIASGKL 315
QTM +L F+ +Y+ G L
Sbjct: 55 QTMDRLYFVMEYVNGGDL 72
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 399 KSLWCWCYCNTRTS 440
KS+ C C+C RT+
Sbjct: 74 KSIICKCFCKRRTN 87
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 399 KSLWCWCYCNTRTS 440
KS+ C C+C RT+
Sbjct: 522 KSIICKCFCKRRTN 535
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 243 SYQNQTSNYEQVKLYLPIYCIRK 311
+Y+N +NY KLY I I +
Sbjct: 310 NYKNYNNNYNSKKLYYNIINIEQ 332
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 243 SYQNQTSNYEQVKLYLPIYCIRK 311
+Y+N +NY KLY I I +
Sbjct: 321 NYKNYNNNYNSKKLYYNIINIEQ 343
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 223 GILIYHLATKIKPQTMSKLNFICQYIASG 309
G+ + + K QT+++LNF Y+ G
Sbjct: 38 GVFSNNKSKKYFEQTLNELNFNLNYVNKG 66
>EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate
isomerase protein.
Length = 247
Score = 21.4 bits (43), Expect = 7.9
Identities = 19/83 (22%), Positives = 34/83 (40%)
Frame = +1
Query: 403 ACGVGVIVTPEQVEQAVEKHMVKYKQELLEKRYRFNSGIIMQAVRADLTWADGKAIKSEV 582
A G G TP+Q ++ EK + + + + + II +T + K + E
Sbjct: 168 AIGTGKTATPQQAQEVHEK-LRNWFSKNVNQTVAETVRII---YGGSVTAGNAKDLAKEK 223
Query: 583 DVQIFDLLGPKTEADLAPVPKAK 651
D+ F + G + D + AK
Sbjct: 224 DIDGFLVGGASLKPDFVQIVNAK 246
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 246 YQNQTSNYEQVKLYLPIY 299
Y+N N EQ+ + +P+Y
Sbjct: 117 YKNYIINIEQIPVPVPVY 134
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 246 YQNQTSNYEQVKLYLPIY 299
Y+N N EQ+ + +P+Y
Sbjct: 117 YKNYIINIEQIPVPVPVY 134
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 264 NYEQVKLYLPIYC 302
N EQ+ + +PIYC
Sbjct: 115 NIEQIPVPVPIYC 127
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 264 NYEQVKLYLPIYC 302
N EQ+ + +PIYC
Sbjct: 115 NIEQIPVPVPIYC 127
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 264 NYEQVKLYLPIYC 302
N EQ+ + +PIYC
Sbjct: 115 NIEQIPVPVPIYC 127
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 264 NYEQVKLYLPIYC 302
N EQ+ + +PIYC
Sbjct: 115 NIEQIPVPVPIYC 127
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 264 NYEQVKLYLPIYC 302
N EQ+ + +PIYC
Sbjct: 115 NIEQIPVPVPIYC 127
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 264 NYEQVKLYLPIYC 302
N EQ+ + +PIYC
Sbjct: 115 NIEQIPVPVPIYC 127
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 264 NYEQVKLYLPIYC 302
N EQ+ + +PIYC
Sbjct: 119 NIEQIPVPVPIYC 131
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 264 NYEQVKLYLPIYC 302
N EQ+ + +PIYC
Sbjct: 115 NIEQIPVPVPIYC 127
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 246 YQNQTSNYEQVKLYLPIY 299
Y+N N EQ+ + +P+Y
Sbjct: 117 YKNYIINIEQIPVPVPVY 134
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 264 NYEQVKLYLPIYC 302
N EQ+ + +PIYC
Sbjct: 340 NIEQIPVPVPIYC 352
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 246 YQNQTSNYEQVKLYLPIY 299
Y+N N EQ+ + +P+Y
Sbjct: 342 YKNYIINIEQIPVPVPVY 359
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,875
Number of Sequences: 438
Number of extensions: 3621
Number of successful extensions: 31
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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